Crotalus tigris (Tiger rattlesnake): 120312083
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Entry
120312083 CDS
T08476
Symbol
NLRC4
Name
(RefSeq) NLR family CARD domain-containing protein 4 isoform X1
KO
K12805
NLR family CARD domain-containing protein 4
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04621
NOD-like receptor signaling pathway
ctig05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120312083 (NLRC4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120312083 (NLRC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ctig04054
]
120312083 (NLRC4)
Pattern recognition receptors [BR:
ctig04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120312083 (NLRC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
Nlrc4-like_WHD
NLRC4_HD
CARD
LRR_Zer-1
NB-ARC
nSTAND3
LRR_4
NOD2_WH
AAA_22
AAA_30
LRR_EndoS
AAA_16
Motif
Other DBs
NCBI-GeneID:
120312083
NCBI-ProteinID:
XP_039208271
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MDFLENNREQLIQTMKRTTIMKIVDCLFAKSVLSCEEKDSIMCQKVNQDASRKLICSILE
KGDKACDILVTSLEKIDFFLFKKLQGSHTDGQVTQQDVNCLAQDLASLYRNPSFERFHPL
GGEIDIIFNLKNTYTDILLWKKDIHNSRLVQMTLNALLDELESPCVIEGEAGKGKTTLLK
KIALLWASEDHPSLMPFKLVFFISLSGVEAGLYETICEQLLKKNYRICKEDFMEILELLA
EKVLFLLDGYDEFKSQSCPEIEALIKESHKFKNTVIVTTRTESIRRLRLFGSLIAETGDL
TVESAKKLVKNVLKEATLAEGLLSQLESLDSTFQNSGIQFENLMRTPLFVIIACAIQMGE
STFTPHTQTILFSTLYDLLVKKNKYKIRETSDKHFRLSLIHCGNLALDGIFEQKFVFHPE
DFSSVKEKVLLTIGLMHKYTAQRLKEAYTFFHKSFQEYIAGRRLSRLLRSHRDEEVTRGF
SYLQRISSFSDIITTYHSLLLYTCGSSSEATRKIIRHLSAIHQQGSLFGLPLARDLFPEE
LTKYERIAEEEQGLIATRENSFVECAIRFLYESISETTVKEEFEEFFYDKKLYINTQSIP
TYVCGFFDYFSNCVSMLEVIKLDFFGNSSATRTAWKTVIPEKAVSLFFNWVRKLRGLEIT
LKDFNQLEKGDVKYLEKICCSASSLRLIINKCAGLTGKLREVLNSCTNLQDLIVESTPLS
MEDEQQITKMMVLKTIKIKDLQSENQHGGLLDGISTLTNVEKIIFDNVQMNENTADKLAE
GLKNLKKLNSLQLKELTHVGNGMISIVKSISLYLQELEEIYLVNCCISGTAVEILVQNIC
NLPKLSALDLSNNYLANGGKEALCQLVESLNVLPNMRILMFPWVDEVNDCLVKLEELKSM
PQLTKLGLRKWQTTNSDARILSTLFAKASLTDLQNLDMAETCLTSEGWLTILKALTHFKK
LTFLDFSQQQGFTPSALLVLALARLINQLVSLQEIDLTGWQFDTHELQEMNKAKESHRNE
LQVIVSSIKPLLDTTI
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggattttttggagaataaccgtgaacagcttattcaaacaatgaagaggacaactatc
atgaaaattgtagattgtctttttgcaaaatctgttttgtcatgtgaagaaaaagatagt
atcatgtgccaaaaagtaaatcaggatgcgtcaagaaaattgatatgttccattttggaa
aaaggtgacaaagcctgtgatattttggtgacatcactggagaaaatagattttttcctg
tttaagaaactacagggatcccatacagatgggcaagttacacaacaggatgtcaattgc
ttggctcaggatttagctagcttatataggaatccatcctttgaacgttttcatccacta
ggtggagaaattgatatcatctttaatttgaagaatacctatacagatatcttgctttgg
aagaaagatatccataattcccgattggtgcaaatgactttaaatgcccttttagatgaa
ctggaaagtccctgtgtcatagagggggaggctggaaaaggaaaaacgactcttctcaaa
aaaattgctttactctgggctagtgaagatcatccttctctgatgccgttcaagcttgtc
ttcttcatcagcctgagtggggtggaggcaggactatatgagaccatatgtgagcagctt
cttaagaagaactatagaatatgtaaagaagactttatggagatattagaattgctagcg
gaaaaagtccttttccttttagatggatatgatgaattcaaatctcagagctgcccagaa
atagaagcgctgataaaagaaagtcataaattcaagaacacagttattgttactacaagg
acagagtcaattcgaagactgaggctgtttgggtcactgattgctgagacaggtgatcta
acagtggaaagtgcaaaaaaactagttaaaaatgtattgaaggaagccacattagctgag
ggcctgctgtctcaattggagagtttagattccacttttcagaattcagggattcagttt
gagaaccttatgaggacccctttatttgtcattattgcttgtgccatccaaatgggagaa
tccacttttactccacatacacaaaccattctgttctccaccttatacgatttgctagta
aagaaaaacaagtacaagatcagagagacaagtgacaaacattttcggctcagcttaatt
cactgtggaaatttagctttggatggaatctttgagcaaaaatttgtttttcatcccgag
gatttctcaagcgtgaaagaaaaagtgctgttaactataggtcttatgcacaagtacaca
gctcagagactaaaagaagcatatacgttttttcataaatctttccaagaatatattgca
ggtagaagactttccagactattgagatcccatagggatgaggaagtaaccagagggttc
agttatctccaaaggattagcagtttctcagatataattaccacttaccacagtttactt
ctgtatacctgtggatcgtcttctgaagccaccagaaaaattatcaggcatttatcagcc
attcatcagcagggcagtctttttggattgcctttggctcgtgatttatttccagaagaa
ctcacgaaatacgaacgaattgctgaagaagagcaagggttaatagcaactcgggaaaat
tcatttgtggagtgtgctattagattcctttatgaaagcatctctgaaacaactgtaaag
gaggagtttgaggaattcttctatgataaaaaattgtacatcaatacccagagcattccc
acctatgtctgtgggttttttgactacttttctaactgtgtaagtatgttagaagtcatc
aaattagacttttttggtaattcatcagctacaaggacagcatggaaaactgttatcccc
gaaaaggcagtgtccttattcttcaattgggttcgaaagctcagaggtttagaaattaca
ttaaaagatttcaatcaattagaaaagggtgatgttaagtatctggaaaaaatatgctgc
tctgcctcaagtctgagactgatcatcaacaaatgtgctggcctcacaggaaagttgagg
gaagtcctcaatagctgtacaaatctgcaggatcttattgtagagtccacacctcttagc
atggaagatgaacaacagataaccaaaatgatggtactgaaaactataaagataaaagac
ctgcaaagtgaaaaccagcatgggggccttcttgatggaatatctactcttactaatgtg
gaaaaaattatatttgataatgtccagatgaatgagaacactgctgacaaattagctgaa
ggattaaagaatttgaaaaaattgaattccttgcagttgaaagagcttacacatgttgga
aatggaatgataagtatagtaaaatcaatatccttatatcttcaagaactggaagaaatt
tatttagttaactgctgcatttcggggactgctgtagaaattctagttcagaatatttgc
aatttacccaaactttctgctcttgatttatccaacaattatttggcaaatggaggaaaa
gaagccctttgtcaattagttgaaagcttaaatgtcctaccaaacatgaggattctgatg
ttcccttgggtggatgaagtgaatgattgccttgttaagttagaggagttaaagagtatg
ccacagttgaccaaacttgggctaaggaaatggcaaactaccaactctgacgccagaatt
ctgagtactctttttgcaaaagcatctttgacagatctccagaatctggacatggcagaa
acttgccttacaagtgagggatggctcactatcttgaaggcattaacacatttcaagaag
ctgacatttctagacttcagccaacaacaaggcttcacaccctctgccctcttagtcttg
gcactggcccgcctaattaaccagttggtttctttacaagagattgatctaactggttgg
cagtttgatacacatgagctgcaagaaatgaacaaagcaaaggaaagtcataggaatgag
ttgcaagtaatagtttcttccatcaagccacttctggatacaacaatctga
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