Crotalus tigris (Tiger rattlesnake): 120312088
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Entry
120312088 CDS
T08476
Symbol
LTBP1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120312088 (LTBP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ctig04990
]
120312088 (LTBP1)
Domain-containing proteins not elsewhere classified [BR:
ctig04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
120312088 (LTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_MSP1_1
Plasmod_Pvs28
EGF_2
COX7C
Motif
Other DBs
NCBI-GeneID:
120312088
NCBI-ProteinID:
XP_039208281
LinkDB
All DBs
Position
Unknown
AA seq
1624 aa
AA seq
DB search
MAWIRWAFLLGVCAFWSPTLDASEKAKVRTVTYVLQPEQPGASHSRRQSGRQQRLFNLKL
VDSLYGSSRRSSTLERTRRMSKPSSAGVQLRLGPAVSLQHKPAGTHTASSSSSFAKAGKV
ALRSKTQQRQSNSTSSAKIYPKAHLRQLQGVNVCGGQCCHGWSKVPGSQRCTKPNCSPPC
QNGGMCLRPQLCVCKSGTKGSVCGDATKQETVSPGGPSPATPPWPIPQRSVQQMFSKKVQ
VQQKSNPMAQMTFTLKQKPPGLSQQTQPQIIPLSSQSLMMNVHQGQTHEYVIKPKYYPSK
KVLSGEQSTESSLPLRMSQDQLATSYQMGNHTGRIKVVFTPSICKVTCKKGTCQNSCEKG
NTTTLISENGHAADTLTAPNFRVVICHLPCMNGGQCSSRDKCQCPPNYTGKLCQIPVQSG
STSQLYHNSQQVSKTVGSHVIHSTHTLPLTVPGQQGAKVKIPPNFVNIHVKHPPEASVQF
HQVSRIDSTSAGQKPKPKPPTSGHSQSPYQNLPFQKTQKIHSTYIHQQPITHSFPVSAKA
QLGRCFQETVGTQCSKALPGLSKQEDCCGTVGTSWGFNKCQKCPKKPAYFGYSQVVDCPQ
GYKRINATFCQDINECQLQGVCPNGECLNTMGSYRCTCKLGFVPDSTFSRCIPDNPMAIE
EKGPCYRYVSAGKQCMHPLSVQLSKQLCCCSVGKAWGPRCEKCPLPGTAAFKEICPGGMG
YTVSGSHRNKLYHHPAVRVQPPVFGKTQITHPVAKGPSPPPLPAKEEPVEALTISQKSEP
EVAVREVVEKTSPPLPVEVGPDVSTSSASQVIAPTQVTEINECTVNPDICGQGHCINLPV
RYTCLCYDGYRLNDQQTKCSDINECSQTPNLCSLGRCENTEGSFLCICKAGFMANEQRTD
CVDVDECARPDTCGEGLCVNTIGSYKCEYCDRGFQMNRRGQCEDLDECSVPHTCPDAECI
NAPGSYQCVPCRDGFRAWNGKCHDVNECQYSSLCTNGQCENLEGSFRCLCSQGYQLSPAG
DQCEDVDECQQQQQQQFCRNGQCRNVAGSYRCICEQGYQLSHARDYCEDINECQEDKNVC
RGGTCINTKGSYECTCPEGFQLIPSRGCQDINECAGSNLCSSHGKCLNTEGSFRCICEQG
FMVSRDGRTCEDMDECANSTICGDHGFCENSPGSYRCLCYQGYQYLQDGQGCVDVNECEM
LSGVCGEALCENVEGSFLCLCSNENQEYDPMSGLCQFRSSTEVPDRTKETVEKKECYYNL
NDANFCDNVLTSNVTKQECCCTLGAGWGDNCEIFPCPVLGSAEFIELCPEGKGFIPSEEP
HYGDVAHTYKDADECQLFGQEICKNGFCLNTQPGYECYCKQGTYYDPIKLQCFDTDECQD
ISSCIDGQCINTEGSYSCFCTPPMVLDSTGKQCIRPAESSEQTEESDVYQDLCWQHLNED
FVCSQPLVGKQTTYTECCCLYGDAWGMQCALCPMKNSEDYAQLCNIPVPGSRPYGQDALV
DFEQEHYTSETDPYFMEDRFLNSFEELQAEECGILNGCENGRCVRVQEGYTCDCFDGYHL
DMTKMTCVDVNECNELNNRMSLCKNAKCINTEGSYKCVCLPGFVPSSRPNYCTPLNSDPE
SDLE
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atggcttggatcaggtgggctttcctgctcggcgtctgtgccttttggtccccaacgctt
gacgcttccgaaaaggcgaaggtgaggacggtcacctacgtgctgcagcccgagcagccc
ggcgcgtctcacagccgccggcagagcggaaggcagcagcgcctgttcaacctgaagctg
gtggattccctttacggcagctctcggcgcagcagcaccttggagcgaactcgccggatg
agcaaaccgagcagtgccggcgtacagctccgcttgggtcccgccgtgagtcttcaacac
aaacctgccggcacccacacggcgtcctcctcttcctccttcgccaaagctggaaaagtc
gccttgcgctccaagacccagcagcgccagagcaacagcacctccagcgctaagatctac
cctaaagcccatctgcggcagctgcagggggtgaatgtctgtggtgggcaatgctgtcac
ggctggagcaaagttcctgggtcccagaggtgcaccaaacctaactgttcaccaccatgc
cagaatggagggatgtgtctacgaccccagttgtgtgtctgtaagtctggtacaaaagga
agtgtttgtggagatgccactaagcaagaaactgtttcacctgggggaccaagtcctgct
actccaccctggcctatccctcagcggtcagttcagcagatgttttcaaagaaggtgcag
gtccagcagaaatcaaatcccatggctcagatgacattcacactcaagcagaaacctcct
ggattatctcagcagacacagccacaaattatccctctttcatcccagagcttgatgatg
aatgtacatcaaggccaaacacatgaatatgttatcaagcctaagtattatccatcaaag
aaagtgctctcaggagaacagtccacagagagctctttacctctaagaatgagccaggat
cagcttgcaacatcatatcagatgggaaatcatacgggacgcataaaggtggtctttacg
cccagcatttgtaaagtgacttgtaaaaaaggcacctgtcagaacagctgtgagaaagga
aatacgacaacgctgattagtgaaaatgggcatgctgctgacaccttgacagctcccaac
ttccgagtagttatttgccaccttccttgcatgaacggtgggcagtgcagctcaagagac
aaatgccaatgtcctcctaattacactggtaaactttgtcagatccctgtgcagagtgga
agtacttcgcaactttatcataattcgcaacaagtaagcaaaactgtgggatctcatgtc
atccattccacgcatactttaccactgactgtgcctgggcagcaaggagccaaagtaaaa
attcctcctaactttgtaaatatccatgttaaacatccacctgaagcttcagtgcaattt
catcaagtttcaaggattgacagcacatcagcagggcaaaaaccaaaaccaaagcccccc
acctcaggacattcccagagtccttatcaaaacctaccatttcagaagacccagaaaatt
cattcaacctacattcaccagcagcctatcactcatagttttcctgtttctgctaaagca
caacttggacgatgtttccaggagacagttgggacccagtgtagcaaagcacttcctggc
ctatccaagcaagaagattgctgtgggactgtgggaacttcctggggttttaacaagtgc
caaaaatgtccaaagaaaccagcttattttggatatagccaggtagtggattgtccacaa
ggttacaagagaattaatgcaaccttttgtcaagacattaatgaatgccagttacaaggg
gtttgccctaatggtgagtgtttaaataccatgggcagctataggtgtacctgcaaactg
ggatttgtaccagattctactttttccagatgtatccctgataatcccatggccattgaa
gagaaagggccctgctaccggtatgtcagtgcaggaaagcagtgtatgcaccctctctct
gttcagctcagcaagcagctctgctgttgcagtgttggcaaggcctggggcccccgctgt
gaaaaatgtccccttccaggaacagctgcttttaaggaaatctgccctggtggaatgggc
tatacggtttctggctctcatagaaacaagctatatcatcaccctgcagttagagttcag
ccacctgtctttggcaagacccagattactcatcctgttgctaaaggtccttctcctcca
cctctcccagcaaaggaagagccagtggaggcactgaccatctcacagaaaagtgagccc
gaagttgctgtgcgagaagtggtggagaaaacctctcctccgctgcctgtagaagttgga
ccagatgtctccacctcaagtgccagtcaagtgatagcaccaactcaagttacagaaatc
aatgagtgtacagtaaatccagacatctgtggacaaggacattgtattaacttgcctgtg
agatacacctgcttatgctatgatggatataggcttaatgatcaacaaacaaaatgttct
gatattaatgaatgttctcagactcctaatctctgctcccttgggcgttgtgaaaataca
gaaggaagcttcctgtgcatttgcaaggccgggttcatggccaatgaacaaagaacagat
tgtgttgatgttgatgaatgtgccaggcctgatacctgtggagaagggttatgtgtaaac
accattggttcatataaatgtgaatattgcgacaggggattccagatgaacagaaggggc
cagtgtgaagaccttgatgaatgctcagtgccacatacatgtccagatgcagaatgtatt
aatgctcctggttcttaccaatgtgtcccttgtagagatggattcagagcgtggaacgga
aagtgtcatgatgtaaatgaatgtcagtatagcagtctttgcacaaatggccagtgtgaa
aaccttgagggatctttcagatgcctttgtagccaaggttatcaactttccccagcagga
gatcagtgtgaagatgtagatgaatgtcagcagcagcaacagcagcagttctgcagaaat
gggcaatgcagaaatgtagctggatcttacaggtgtatttgtgagcaaggctatcagctg
tcacatgcaagagactattgtgaagatattaatgaatgccaagaagacaagaatgtttgt
cgtgggggaacttgtattaataccaaagggtcttatgagtgtacatgtccagagggcttc
cagttaattccttctagaggttgtcaagatatcaatgaatgtgcaggatccaacctctgt
tcctcccacggaaaatgtttaaatactgagggttctttccgctgcatttgtgaacagggt
tttatggtttctagagatggacgaacatgtgaagatatggatgaatgtgcaaacagtact
atatgcggtgaccatggtttctgtgaaaattctcccggctcctaccgctgtctttgttat
cagggatatcaatatctacaggatgggcagggctgtgtggatgtgaatgaatgtgaaatg
ctaagtggggtatgtggcgaagctctctgtgaaaatgtggaaggctccttcctgtgtttg
tgttcaaatgaaaatcaggaatacgacccaatgagtggactgtgtcagttccgctcttca
acagaggttccagacagaaccaaagaaaccgtggaaaagaaagaatgttactacaatcta
aatgacgcaaatttttgtgataatgtattaacatccaatgttacaaagcaagaatgctgt
tgtactttgggtgctggctggggtgacaactgtgaaatattcccatgtcctgtgcttgga
agtgctgaatttattgagctgtgtcctgaagggaaagggttcataccatctgaagaacca
cattatggagatgttgcacatacttacaaagatgctgatgaatgccagctctttggccaa
gaaatatgtaaaaatggcttctgtttaaacacgcagccaggttatgaatgttactgcaaa
cagggtacatattatgatcctataaaacttcagtgctttgatacagatgaatgtcaggat
atcagcagctgtattgatggccagtgcatcaatactgaaggctcctacagttgtttctgc
acacccccaatggttctggattctacaggaaagcagtgcatcagaccagccgaatctagt
gagcaaactgaagaaagtgatgtctatcaggatctttgctggcaacatctgaatgaagat
tttgtttgcagtcaacctcttgttgggaagcagactacttatactgaatgctgttgttta
tacggcgatgcatggggcatgcagtgtgccctgtgccccatgaaaaactcagaggactat
gctcagctatgcaacattcctgtacctggatcccggccatacggacaagacgccttggtt
gactttgaacaggaacactacacttcggaaaccgatccatatttcatggaagaccgtttc
ctgaatagctttgaggaattacaagctgaagaatgtggaattctgaatggatgtgaaaat
ggacgttgtgtcagggtgcaggaaggatatacctgtgattgttttgatggctaccatttg
gacatgaccaaaatgacatgtgttgatgtgaatgaatgcaatgaactgaataataggatg
tctctgtgtaagaacgccaaatgcatcaacactgaaggatcttataagtgtgtgtgtctt
ccgggcttcgtcccttcgagcaggccaaactactgcacacccttgaactcagacccagaa
agtgacctggagtga
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