Crotalus tigris (Tiger rattlesnake): 120313450
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Entry
120313450 CDS
T08476
Symbol
TNF
Name
(RefSeq) tumor necrosis factor
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04010
MAPK signaling pathway
ctig04060
Cytokine-cytokine receptor interaction
ctig04150
mTOR signaling pathway
ctig04210
Apoptosis
ctig04217
Necroptosis
ctig04350
TGF-beta signaling pathway
ctig04620
Toll-like receptor signaling pathway
ctig04621
NOD-like receptor signaling pathway
ctig04622
RIG-I-like receptor signaling pathway
ctig04625
C-type lectin receptor signaling pathway
ctig04920
Adipocytokine signaling pathway
ctig05132
Salmonella infection
ctig05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120313450 (TNF)
04350 TGF-beta signaling pathway
120313450 (TNF)
04150 mTOR signaling pathway
120313450 (TNF)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120313450 (TNF)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120313450 (TNF)
04217 Necroptosis
120313450 (TNF)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120313450 (TNF)
04621 NOD-like receptor signaling pathway
120313450 (TNF)
04622 RIG-I-like receptor signaling pathway
120313450 (TNF)
04625 C-type lectin receptor signaling pathway
120313450 (TNF)
09152 Endocrine system
04920 Adipocytokine signaling pathway
120313450 (TNF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120313450 (TNF)
09171 Infectious disease: bacterial
05132 Salmonella infection
120313450 (TNF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ctig04052
]
120313450 (TNF)
00536 Glycosaminoglycan binding proteins [BR:
ctig00536
]
120313450 (TNF)
Cytokines and neuropeptides [BR:
ctig04052
]
Cytokines
Tumor necrosis fators
120313450 (TNF)
Glycosaminoglycan binding proteins [BR:
ctig00536
]
Heparan sulfate / Heparin
Cytokines
120313450 (TNF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
120313450
NCBI-ProteinID:
XP_039211304
LinkDB
All DBs
Position
Unknown
AA seq
230 aa
AA seq
DB search
MSSEQLVNDVEKGSIVVIQEPSQKNNHWKCLSICSFLLLIGAVTVFALLQLDAFGSSEKE
NSKLQGNSFSEHLPDTMKVQALKSGKPAAHAIASSHHSPQLKWTTDVLPSILENGMRLDE
NENSLIVPSTGLYFVYSQLLFHKDHCKKPLLLTHNITLWSSEFSFEVELLKSIKSVCEDA
SSDKKLWFESIYQGAVFKLNRGDRLLSKTNLPEFLDFTHSTQIYFGVIAM
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgagcaactggtgaacgatgtggagaaagggagcatagttgtaatccaggaa
ccctcccagaaaaataaccactggaagtgtctcagcatctgttccttcttgcttctgatt
ggggccgtaaccgtgtttgccctcttgcaactggacgcatttggatcgtctgaaaaggag
aactctaaactacagggaaattcattttctgaacatctgccagacacaatgaaagtacaa
gccttgaagtctggaaaaccagctgcccatgctattgcttcttcccatcattcaccacaa
ctgaagtggactacagatgtgcttccttccattctggagaatggcatgcggctggatgag
aatgaaaactcccttattgtgccttctactggattgtactttgtctattctcagcttttg
ttccacaaagaccactgcaaaaagcctcttctgctcacccacaacatcaccctctggtcc
tcagagttcagcttcgaggtagaattgctaaaatccattaaatctgtctgtgaagatgcc
tccagcgataaaaaattgtggtttgaatctatttatcaaggggctgtcttcaagctgaat
agaggagaccgcttgctgtccaaaacaaatctccctgaatttctggacttcactcattca
acccagatttattttggggtcattgctatgtaa
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