Crotalus tigris (Tiger rattlesnake): 120315152
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Entry
120315152 CDS
T08476
Symbol
FBN1
Name
(RefSeq) fibrillin-1 isoform X1
KO
K06825
fibrillin 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04350
TGF-beta signaling pathway
ctig04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120315152 (FBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120315152 (FBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ctig00536
]
120315152 (FBN1)
Glycosaminoglycan binding proteins [BR:
ctig00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120315152 (FBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
hEGF
FXa_inhibition
EGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
FBN_EGF_st1
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
120315152
NCBI-ProteinID:
XP_039214950
LinkDB
All DBs
Position
Unknown
AA seq
2893 aa
AA seq
DB search
MRLGGLLVTVAWGFSGLLLLLLASPSPGEAGVPSAAEGSPRAVEGAFASFAAAKETNGRA
SRAKRRGQAGGAAGHDALKGPNVCGSRYNAYCCPGWKTLPGGNQCIVPICRHSCGDGFCS
RPNMCTCPNGQIAPSCGSKSVQHCNIRCMNGGTCSDDHCLCQKGYTGTHCGQPVCENGCL
NGGRCVAPNRCACTYGFTGPQCERDYRTGPCFTLVSNQMCQGQLSGIVCTKTLCCATVGR
AWGHPCEMCPAQPHPCRRGFIPNIRTGACQDVDECQAIPGICQGGNCINTVGSFECKCPA
GHKFNEVTQKCDDIDECRTIPGICEGGECSNTISSYFCKCPSGYATTPDGTGCIDVRPGY
CFTSLTNGRCNNQLQQVLTKTQCCCDSGRCWSPGATTAPEMCPIRATDEFRKLCIYGSLP
AERPDRPTVPRPPHGFPPDIFRPPHFPPDVVPPSYRPPGVVSVNLTRPQANFCQLYQNLC
INGRCIPTPGSYRCECKKGFELDLRGECIDVDECERNPCIGGDCVNTQGSYICKCRPGYQ
STPMRTECRDVDECLQNGRICNNGRCINTDGSFHCVCNAGFHVSVDGRNCEDMDECSIRN
MCLNGMCINEDGSFKCICKPGFQLAIDGRYCRDIDECETPGICMNGRCVNTDGSFKCECF
PGLAVGLDGRVCVDTHMRSTCYGEYRRGQCVKPLSGAVTKSECCCASTDYAFGEPCQPCP
AQNSEEYHGLCSSGPGITASGNDINECALDPDICPNGICENLRGTYKCICNFGYEVDSTG
KVCLDIDECAVNRLLCDNGQCRNTPGSFTCTCPKGFVYKPDLQTCEDIDECESSPCINGV
CKNTPGSFVCECSPESTLDTSKTVCIETVKGTCWQTIVNGRCEININGATLKSQCCSSLG
AAWGSPCVPCEKDPICSKGYSRIRGNQCEDVNECVVFPGVCTNGQCVNTLGSFICQCPNG
MTLDATGRRCIDIRLESCYLKHDDEDCTAPVGGRHRLDACCCSVGAAWGPDCDECPIRGS
PEYEALCPRGPGFSTRGEIINGKPFYKDINECKMIPRLCTYGKCRNTIGSFRCKCDSGFA
LDSDERNCTDIDECRISPDLCGQGICVNTPGDFHCECFEGYESGFMMMKNCMDIDECERN
PMLCRGGICINTEGSYKCDCPPGHQLAANISACIDINECDLSLNLCRNGRCVNLVGKYQC
SCNPGYQSTPDRLFCVDIDECSIINGGCDTYCTNSEGSYECSCRPGFALMPDHRTCTDID
ECENNPNICDGGQCTNIPGEYRCLCYDGFMTSEDMKTCLDVNECDLNPNICLSGSCENTK
GSFICHCEIGYSGKKGTTGCTDINECEIGADNCDRNAVCTNTAGSFKCSCKPGWLGDGTK
CVDLDECANATHQCSPHADCKNTAGSYRCLCKEGYTGTGFTCTDIDECSENVNLCENGQC
LNAPGGYRCECDMGFLPSIDGRACEDINECSLSNICVFGTCQNLPGFFRCQCETGYELDR
SGGNCTDINECADPTTCISGTCHNTAGGYTCECPPDFELNPTRVGCVDTRSGVCYLEIKP
RGDNGDTACSNEIGIGVSKASCCCSLGKAWGIPCEQCPAVNSTEYKQLCPGGEGFRPNPI
TVILEDIDECQELPGLCQGGKCINSFGSFQCQCPSGYQLNEETRVCDDVNECDIAGICGP
GTCYNTIGNFTCICPPDYLQVNGGNNCMDMRRSLCYRNYNAENQTCDGELLFNMTKKMCC
CSYNIGRAWNRPCEQCPIPSTDEFSSLCGSQRPGYFIDIFTGLPVDIDECREIPGVCENG
ICINMPGSFRCECSGGFFYNDKLLICEDIDECHNGPVCSQNADCVNTPGSFRCDCKPGYR
FTSVGRCVDRNECVEIPNICSHGDCIDREGGYTCRCHTGFKTNEDETMCLDINECEREPC
GNGTCRNTVGSFNCRCHVGFMLSHNNDCIDVDECATGNGHLCRNGQCVNMVGSFRCLCNE
GYEMSPDGRTCIDINECALDPGKCSPGTCQNLDGAYRCICPPGYALEDVDKCVDIDECKE
KANICVLGTCSNTLGSFACLCPEGFIVSSTGQRCLDLRVSYCFTKFEEGKCSVPKSRNHS
KQECCCNMQGQGWGDPCELCPEEAHEAYKQICPFGVGVLVGPAGEPIDADECQDPDNCKN
GQCINTDGSFRCECPFGYLLQGSECIDIDECAVGAPCGNGTCKNIIGSFECTCEEGFEPG
PMVTCEDVNECALNPLLCAFRCVNTYGSYECKCPAGYVLREDKRMCKDQNECEEGIHDCD
SKQMTCKNLIGTYMCICGPGFQRRPDGEGCIDENECQSKPGLCENGRCINTQGSYRCECE
DGFLVNEAQNECLDTREGYCFTEILHSMCQIDSSSRNPVTKSECCCDGGRGWGPGCEICP
FLGTLAFKKLCPYGRGLTTTGEDIDECKVIHDVCRNGECVNERGSYHCTCKEGYTTDITG
TLCIDLNECNLSPKPCNFICKNTEGSYQCSCPKGYILQEDGRSCKDLDECATKQHNCQFL
CVNTIGGFTCKCPPGFTQHHSACIDNNECATDINLCGSKGVCQNTPGSFTCECQRGFSLD
QTGAACEDVDECDGNHRCQHGCQNIIGGYRCSCPQGYLQHYQWNQCVDENECLSSHICGG
ASCHNTLGSYKCMCPTGYQFEHFSGQCQDVNECGSAQAPCSYGCSNTEGGYVCGCPPGYF
RIGQGHCVAGMGLGKGQNHEVPVSGELDDSSLSPEACYDCKINGYPKRGRKRRGLNETNV
LDTEDLLGTEAVVNLASWDLEKPATLSFNISSLNNKDRILKLIPALTTLTNHNRYLIDHG
NESGFFRINQKEGVSFLHLAKKKPTPGVYSLAISSIPLYKKKELLQFEDKHDQDYLSGEL
GDSLRMKIEIVLH
NT seq
8682 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgggcgggctgctcgtgaccgtcgcctggggcttctccgggctgctgctgctg
ctgctcgcctcgccttccccgggcgaggcgggggtcccctccgccgccgagggcagcccg
agagccgtcgagggcgccttcgcctccttcgccgccgccaaggagaccaacggccgggcc
agccgggccaagcgaagagggcaggcgggcggcgccgcgggacacgacgcgctgaaagga
cctaatgtatgtggatcacgttacaatgcatattgctgtcctggatggaaaactttacct
ggtggaaatcaatgtattgtcccaatttgcaggcattcctgtggagatgggttttgctcc
aggccaaacatgtgcacgtgtccaaatggccagattgctccatcctgtggctcaaaatca
gtgcaacactgcaacatcagatgcatgaacggtgggacttgcagtgatgatcattgtctc
tgtcaaaagggatacaccggaacacactgtgggcagcctgtctgcgaaaatgggtgtctt
aatggaggaaggtgtgttgcaccaaacagatgtgcttgcacatatggcttcacgggacct
cagtgtgaaagagattacaggacagggccgtgcttcaccttggtgtccaaccagatgtgc
caggggcagctgagcgggatcgtgtgcacaaaaaccctctgctgcgcaacagtggggaga
gcgtggggtcacccctgtgaaatgtgcccagcccagcctcatccttgccggaggggattc
atcccaaacatacgaacaggagcttgccaagatgtggatgaatgccaagctatccctggg
atttgtcaaggaggaaattgcattaatacagttggatcttttgagtgcaaatgcccagct
ggacacaagtttaatgaagtgacacagaaatgtgatgatattgatgaatgccgtacgatc
cctggcatctgtgaagggggcgaatgttctaacactatcagcagttacttctgcaaatgt
ccttccggatatgctacaaccccagatggcaccgggtgcattgatgtgcgaccgggatat
tgctttacttctctcaccaacggccgttgcaacaatcagctgcagcaagtgctcaccaaa
acccagtgttgttgtgactccgggcggtgctggtctccaggagctactactgccccagaa
atgtgccccattcgtgctacagacgagttccgcaaattgtgtatatacggcagtttgcca
gctgagaggccggatagacccaccgtcccaagaccaccacacggttttccgcctgacatc
ttccggcctccacacttcccaccagatgtggttccgccttcttatagacccccaggtgtt
gtctcagttaatctcactcggccacaagccaacttctgccagttgtatcaaaatctttgc
attaatggacgctgcattccgactcctggaagttatcgctgtgaatgcaagaaagggttt
gaactggaccttagaggggaatgcatagatgtggatgaatgcgaaaggaatccgtgcatt
ggtggcgactgcgtgaacacgcaaggttcctatatatgcaagtgtcggcctggatatcag
agtaccccgatgaggacagaatgccgagatgttgatgagtgtttgcagaatggccggata
tgtaacaatgggagatgcatcaataccgacggcagcttccactgtgtctgcaatgccggc
tttcatgtgtcagttgatggaaggaactgtgaagatatggatgaatgcagcatacgaaac
atgtgtcttaatggtatgtgcatcaatgaagatggaagttttaagtgtatttgcaaacct
ggtttccagttagccatagatggacgttactgcagagatattgatgagtgtgagacaccg
ggaatatgcatgaacggccgctgcgtgaacaccgatggttccttcaaatgcgaatgcttt
cctggcctcgctgtggggttggatggacgtgtgtgtgtcgatacacatatgcgaagcacc
tgctacggagaatacagaagaggccagtgtgttaaaccattatctggtgcggtcactaag
tccgaatgctgctgtgcgagcacagattatgcctttggggagccttgccaaccatgtcct
gcacaaaattcagaggaatatcacggtctttgtagcagtggaccaggaattacagcatca
ggaaatgatatcaatgaatgtgcattggatcctgacatttgtcccaatggaatctgtgaa
aatctgcgtggaacatataaatgcatatgtaattttggatatgaggtggattcaactggg
aaagtctgcttagacattgatgaatgtgccgtgaacaggttgctttgtgacaacgggcaa
tgcaggaacacccctggaagtttcacttgcacctgtcccaagggatttgtgtataaaccg
gatctacagacatgtgaagatattgacgaatgcgaatccagcccctgtatcaacggcgtg
tgtaaaaatacccctggctctttcgtctgtgaatgttcgcccgaaagtactttggatacc
tccaaaaccgtctgcattgagacggtcaaaggaacttgttggcagaccatcgtgaatggg
agatgtgaaataaatatcaacggggccacgctgaaatctcagtgctgttcctcgctgggt
gctgcttggggcagtccctgtgtcccgtgcgaaaaagatccaatatgttccaaaggatat
tcaaggataaggggaaatcagtgtgaagatgtgaatgagtgtgtagtgtttcccggcgtg
tgcaccaatggccagtgtgtcaacactttgggatccttcatatgtcagtgtcccaatgga
atgaccttggacgcaactggacggagatgcattgatattcgcttggagtcctgctatctg
aaacacgacgacgaagactgcactgcacccgttggagggagacaccgtctggacgcttgt
tgctgttctgttggggccgcttggggacctgattgtgacgaatgtcccataaggggcagt
cctgaatatgaagccctttgcccacgaggaccgggattttccaccaggggagaaattata
aatgggaagcctttctataaagatatcaacgaatgcaaaatgattccaagattgtgcacc
tacggaaaatgcagaaacaccattggcagcttccggtgtaaatgcgacagcgggtttgca
cttgattccgatgagaggaactgcacagatattgatgaatgccgcatttctcctgatctc
tgtggccaaggaatttgtgtcaatacccccggagacttccactgtgaatgctttgagggc
tacgaaagtggatttatgatgatgaaaaactgcatggatatcgatgaatgcgagagaaac
ccgatgttgtgcagagggggcatttgcatcaataccgaaggaagctacaagtgcgactgt
cctccgggccatcagctggctgccaacatctctgcctgcattgacatcaatgaatgtgac
ctgagtctaaatctgtgcagaaatggacgctgtgtcaacctggttggaaagtatcagtgt
tcttgtaaccctggatatcaatctacacctgacagactcttttgtgttgatattgatgaa
tgcagtataataaatggcggttgtgacacatactgtacaaattcagaaggcagctatgaa
tgtagctgtagacctggctttgctctaatgccagaccacagaacttgcaccgatattgat
gagtgtgaaaacaatccgaacatctgtgatggtggtcaatgcactaacatccctggagaa
tacaggtgtctttgctatgatggcttcatgacatcagaggacatgaagacttgcttagat
gttaacgaatgtgatctgaacccaaacatctgcctgagtggaagctgtgagaatacaaaa
ggttctttcatctgtcactgtgaaataggttattctggaaagaaaggaacaactggatgt
acagatataaatgagtgtgaaattggggctgacaactgtgaccggaatgctgtttgtaca
aacacagctgggagctttaaatgtagctgcaaaccgggctggcttggagatgggaccaaa
tgtgtagatctggatgaatgcgccaatgccacacaccagtgcagtccacatgctgattgc
aaaaacacagcgggatcatatcgttgcttatgtaaagaaggatatactgggactgggttc
acctgtacagatattgacgaatgttctgaaaatgtcaacctctgtgaaaatggccagtgc
ctaaatgctcccgggggttaccgttgtgagtgtgatatgggatttttgccaagcattgat
ggacgagcttgtgaagatattaatgagtgctctctttccaacatctgcgtctttggaacc
tgtcagaatcttcctggcttcttccgatgtcaatgtgagacaggatatgagctggacaga
agtggcggtaactgcacagatatcaatgaatgtgcagatcccacaacatgtatcagtggc
acctgccacaacactgcaggcggttacacctgtgaatgtccaccagattttgagctgaat
ccaactcgtgttggctgtgtggatacacgctctggagtctgttatttggaaattaaacct
cgaggtgataatggcgatacagcttgcagtaatgaaattggcattggtgtttccaaggct
tcttgctgttgttctcttggtaaagcttggggcatcccttgtgaacagtgtccagctgtg
aattcaactgaatacaagcagttatgtccaggaggagaaggctttcgacccaatcccatt
acagtcattttggaggatattgatgaatgtcaagaactgcctggactttgtcaaggagga
aagtgcatcaattcatttggtagctttcagtgtcagtgtccctctggataccaattgaat
gaagagacacgagtatgtgatgatgttaatgaatgtgatatagctggtatttgtggccct
ggaacctgctacaacaccattggaaatttcacttgtatttgtcctccagattatctgcaa
gtcaacggtggaaataattgtatggatatgaggagaagtctctgctacaggaactacaat
gctgaaaatcaaacttgtgatggggagctgctttttaacatgaccaaaaaaatgtgttgc
tgttcttacaatattggacgagcctggaacagaccttgtgaacaatgtcccatcccaagc
actgatgagttttcaagtctctgtggaagtcaaaggcctggttactttatagacattttt
acaggactacccgttgatattgatgagtgtcgtgagatcccaggtgtatgtgagaatgga
atttgcataaacatgcctgggagcttccgatgtgaatgttcaggtggattcttttacaat
gacaagctactgatctgcgaagatatagatgaatgccacaatggaccagtttgttctcaa
aatgccgattgcgtgaatacaccaggaagcttccgttgtgattgtaaacctggttatcga
tttacatctgtcggtcgatgtgttgatcgcaatgagtgtgtagagatacccaatatttgt
agccatggcgattgcatagaccgtgaaggaggttatacctgccgttgccacacaggattc
aaaaccaatgaagacgaaactatgtgtttggatattaacgaatgtgaaagagagccttgt
ggtaatggcacgtgtagaaacacagttggctctttcaactgccgttgtcacgtcggattc
atgctctcccacaataatgactgcatagatgttgatgaatgtgccactggaaatggacat
ttgtgcagaaatggccaatgtgttaacatggttgggtccttcagatgcctttgcaatgag
ggttatgagatgtcacctgatggaaggacttgtattgatatcaatgagtgtgcgttggac
cctggtaaatgttctcctggtacatgtcaaaatctggatggcgcttacagatgcatctgt
ccccctggatatgccttggaagatgtcgacaagtgtgttgatattgatgaatgtaaagaa
aaagcaaatatctgtgtcctgggaacctgtagtaatactctaggtagttttgcttgctta
tgtcctgaaggtttcattgtgtcctctactggacaaagatgtctagatctgagggtgagc
tactgcttcactaaatttgaagaaggaaaatgttcggttcccaaatcccgaaatcactct
aagcaagaatgctgttgcaacatgcaaggacaaggatggggcgatccctgtgaactttgt
ccagaggaagcacatgaagcttataagcagatttgtccgttcggagttggcgttttggtt
ggcccagccggtgagcccattgatgcggatgagtgtcaagatcccgacaactgtaagaat
ggacaatgcatcaacaccgatggttccttccgttgtgaatgtccgtttggctatctgctt
caagggtctgaatgtatcgatattgatgaatgtgcagttggggctccatgtggaaatgga
acgtgcaagaacatcattggaagttttgaatgcacgtgtgaagaaggttttgagccagga
cccatggtgacatgtgaagatgtgaatgaatgcgctctgaatcctctcctctgcgccttc
cgatgtgtgaacacctatggctcctatgagtgcaaatgtcctgctggttatgtactcaga
gaagacaagcgcatgtgcaaagatcagaatgaatgtgaagaaggaattcatgactgcgac
tcgaagcaaatgacgtgtaaaaacctgataggtacatacatgtgcatatgtggtccagga
ttccagcgtagaccagatggtgaaggttgcatagatgaaaatgagtgtcagtcaaaacct
gggttgtgtgaaaacggacggtgtataaatacacagggaagctaccgttgtgaatgtgaa
gatggtttccttgtcaacgaagcccagaatgaatgcctagacaccagagaaggctactgc
ttcaccgaaatcctccatagcatgtgtcagattgactcgagcagcaggaatccggtgacc
aaatccgagtgctgctgcgacggcgggcgaggatggggacccgggtgtgaaatttgcccg
ttccttggcaccctcgcctttaagaagctgtgtccgtacggccgtggattgaccactacc
ggagaagatatcgatgagtgcaaggtgattcacgacgtttgtcggaacggagagtgtgtc
aatgagagaggatcgtaccactgtacctgcaaggaaggctataccaccgatataactggc
acactttgtatagatctgaacgagtgcaacctgtctccaaagccttgcaattttatctgc
aaaaatacggaggggagctatcagtgctcgtgtcccaaaggatacatcttgcaggaagat
ggcagaagctgcaaagatcttgatgaatgtgcaaccaagcaacacaactgccagtttctt
tgcgtcaacactattggaggttttacgtgcaaatgtcctcctggttttactcaacatcat
tcagcatgtattgataacaacgaatgtgccactgacatcaacctttgtggatcaaagggt
gtttgtcaaaatactcctggaagcttcacgtgtgaatgtcagcggggcttttcactggac
caaactggtgccgcctgcgaagacgttgatgagtgtgacggaaatcaccgatgccagcat
ggctgccagaatatcattggaggatacaggtgtagctgcccacaagggtatctccaacat
tatcagtggaaccaatgtgttgatgaaaacgaatgcctcagttctcatatctgtggtgga
gcatcttgccacaacaccttgggaagttacaaatgcatgtgccccactggatatcaattt
gaacacttcagcgggcagtgccaagatgtgaacgagtgtgggtctgctcaagctccctgc
agctacggttgctccaatacagagggtggttatgtctgcggatgcccaccagggtacttc
cgaatagggcaaggacactgcgtggctggaatggggctggggaaaggtcagaatcatgaa
gtaccggtcagtggtgaattagacgatagctctctttctccggaagcctgctatgactgt
aaaatcaacggctatccgaaaaggggaaggaaacggcgaggcctaaatgaaaccaatgtc
cttgatacagaggatctgctggggacagaagcagttgttaacctggccagctgggacctt
gaaaaaccagccaccttatcgttcaacatctccagccttaacaacaaggaccgcatcttg
aaactcatccccgctctcacgaccctgacaaaccacaaccgatatttaatagaccacggg
aacgaaagtggtttctttaggataaatcagaaagaaggagtcagcttccttcatttagct
aagaagaaaccaacgcctggagtatattccttagcgattagcagcatcccactctacaaa
aagaaggaactccttcaatttgaagataaacatgaccaagactacctcagtggtgagcta
ggagacagcctgagaatgaaaattgaaatcgtgcttcattaa
DBGET
integrated database retrieval system