Crotalus tigris (Tiger rattlesnake): 120316252
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Entry
120316252 CDS
T08476
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ctig01009
]
120316252
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctig04040
]
120316252
Protein phosphatases and associated proteins [BR:
ctig01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120316252
Ion channels [BR:
ctig04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120316252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
120316252
NCBI-ProteinID:
XP_039217550
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MAPKSRLGLFIKKPFIKFICHTGSYLTFLFMLLLASQHIVRTDLHMQGPPPTVVEWMILP
WVLGFIWGEIKEMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEW
EMWHPTLIAEALFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLL
AFANGLNQLYFYYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTN
VKARHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMS
YFDEGGTLPPPFNIIPSPKSCWYLCRWVHKQLCPFRDPEHEQKHKNLKTITERHADNLIQ
NQHYQEVIRNLVKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPQRR
SYSTSSTEVSQKEEAPEECMGETSKAKGISFGVANKKKDFNVSALIKTMSGIETGKEKPK
SNGISKRSFVRNGNRVQRLSSSKKESFKRLGLLFSKMNGHLAEPNQEPMYTISDGVIQPH
YMWQDIKYSQMTKERDNCSKSEINLNEVVYSSNIRHTGQTQCPVVCASSLHCASSICSSN
AKLIDSSEDVFDSWGDACDMFRNQWNDGQEEQVTTRL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcacccaagagcaggctgggactgttcattaaaaagccatttatcaagtttatctgc
cacacgggctcctaccttaccttcctcttcatgctactgctcgcatcccagcacattgtc
aggacagatctacacatgcaaggacctcctcctactgtggtggaatggatgatcctcccc
tgggttttaggttttatttggggagaaatcaaagaaatgtgggacggcggctttaacgag
tacgtgcacgactggtggaacctgatggattttgcaatgaattctctctacttagcaacc
atttctctgaaaattgtcgcctatgtcaagtacaatggttcccgtccaagggaggaatgg
gaaatgtggcacccaaccctgatagcagaagccctctttgccatttcaaacattttaagc
tccttgcgtctcatctccctgtttacagcaaactctcacctgggacccttgcagatctct
ctgggacgtatgctgctagacattctcaagttcctcttcatttactgcctggtgctgcta
gctttcgccaatggactcaaccagctttatttctattatgagacgagtgcctccgaagaa
cccaacaattgcaaagggatccgttgtgagaagcaaaacaatgccttttccacactcttt
gaaactctccagtctctcttctggtcggtgtttggtctgttgaacctctacgtcacgaac
gtcaaagccaggcatgaattcacagaattcgttggggcaaccatgtttggcacttacaac
gtcatctccttggtggttttgctaaacatgctcattgccatgatgaacaactcctaccag
ctgatagcagaccacgcagacatagaatggaagtttgcacgcacaaagctctggatgagt
tactttgatgaaggaggcactctaccccctccttttaatatcatccctagccccaagtca
tgctggtacctttgcaggtgggtccacaagcaactctgcccattccgagacccagagcat
gaacagaagcacaagaacctgaagactatcacggaacgtcacgcagacaacttgattcag
aatcaacattaccaggaagtgatcaggaatctggtgaagagatacgttgctgccatgata
aggaattcaaaaaccaatgaaggcttaactgaagagaactttaaggagttaaaacaagac
atttccagttttcgctacgaagtccttgatttgctgggtaaccggaagcctcaaagaaga
agttactccaccagcagcacagaggtctcccaaaaagaagaagctcctgaggaatgcatg
ggagaaacctccaaggccaagggcatctcctttggagtggccaacaaaaagaaagacttc
aacgtgtcagctctcattaagaccatgtctggcatcgagacagggaaagaaaaaccaaaa
agcaacgggatcagcaagcgctccttcgttcgcaatggcaacagagtccaaaggctctcc
agctccaaaaaggagtccttcaagaggttgggtctcctgttctccaagatgaatggacat
cttgcagaacccaaccaagagcccatgtacaccatttcggatggggtcatccagccccat
tacatgtggcaagacattaaatattctcagatgacaaaagagcgagataactgctccaaa
agtgaaattaacctcaatgaggtggtctacagttccaatatcaggcatacgggacagacc
cagtgccctgtggtttgtgccagctcccttcactgtgcttccagcatctgttcctcaaat
gccaaactcatagactcttcagaggatgtgtttgactcgtggggagatgcttgtgacatg
tttaggaaccaatggaacgatgggcaggaggaacaagtcaccacacgcctataa
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