Crotalus tigris (Tiger rattlesnake): 120317862
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Entry
120317862 CDS
T08476
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04620
Toll-like receptor signaling pathway
ctig04621
NOD-like receptor signaling pathway
ctig04622
RIG-I-like receptor signaling pathway
ctig05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120317862 (TRAF3)
04621 NOD-like receptor signaling pathway
120317862 (TRAF3)
04622 RIG-I-like receptor signaling pathway
120317862 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120317862 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
CCDC18_1st
Cast
ATG16
zf-C3HC4
Rod_CreS
Med28
NOCA1_mid
ODF2_N
PII1_coiled_coil
CCDC18_2nd
Sina_ZnF
MPS2
Tropomyosin
Spc29
Astrin_C
GAS
SPATA24
DUF1664
FliJ
T4SS_LegC2C7
DUF3450
KxDL
BLOC1_2
KIF9
zf-RING_6
SNARE
Csm2_III-A
Motif
Other DBs
NCBI-GeneID:
120317862
NCBI-ProteinID:
XP_039220734
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MDASKKADLPVLVETIQQKANPDRHPIPSIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPRQTECGHRYCETCMSSLLSSTSPKCTACQDTIVKDKIFKDNCCRRELLALQIFCRNEN
KGCRDQLTLGQLLTHLRNDCLFEELPCPRTDCKEKILRKDLPDHIEKNCNYRETTCKYCK
SQVPIIMIQKHEDADCPCVMVTCPHQCSVSALLRKELNAHLSECINAPSTCSFKRYGCTF
QGTNQQVKAHEATSAVQHVDLLKEWSNCLENKVAMLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRSNETKIHHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESIDKTTGQGARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaagcaagaaagcagatcttccagtcttagtggaaacaatacagcagaaggca
aatcccgatcgccaccctatcccatccatttatgtaccagaacaaggtggttacaaggaa
aaatttgtgaatgcagtcgaagacaaatacaaatgtgaaaaatgtcatctcatcttgtgt
aatccaagacagacagaatgtgggcatcgctattgtgagacctgcatgagttctctgttg
agttccacaagtccaaaatgtacagcatgtcaagacacaatagtgaaggataagatattt
aaagataattgctgtcgaagggagcttctagcacttcagatattctgcagaaatgaaaat
aaaggttgtcgagatcaactgaccttgggacagttgctgacacatctaagaaatgactgt
ctctttgaagaacttccatgtcctcgtactgattgtaaagaaaaaatactgagaaaagat
ttaccagatcatatagaaaaaaactgtaactatcgggaaacaacatgtaaatactgtaaa
agccaagtaccaatcattatgatacaaaaacatgaagatgcagactgtccttgtgttatg
gttacatgtcctcatcagtgcagcgtttcagcactcctcagaaaagagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccagcaagttaaagcacatgaagccacctcagcagtgcagcatgtagac
ttattgaaagagtggagtaattgtctagaaaataaggtggccatgctccagaatgaaagc
ttggaaaagaacaagagcatacaaactttacataatcaaatttgtagttttgaaatagaa
attgagagacagaaggaaatgctgcgaagtaatgaaaccaaaatacatcacttgcagcgg
gtaatagatagtcaagctgagaagctgaaagaactagacaaagagatccgacctttccga
cagaactgggaagaagcagacagcatgaaaagtagcgttgagtccctccagaacagggtg
actgaactggaaagcattgataaaactactgggcaaggagctagaaacacaggtcttcta
gaatcacagttatctaggcatgatcaaatgctaagtgttcatgacatccgtctggctgat
atggacctacgatttcaagtcctggaaacagcaagttacaatggagtattaatctggaaa
attcgagattataaacgtcgaaagcaagaggctgttatggggaagactttgtccttatat
agccaaccattttatacaggatactttggctataagatgtgtgccagggtttacctcaat
ggagatgggatgggcaaagggacgcacttgtctttgttctttgttataatgcggggagaa
tatgatgcattgcttccttggccattcaagcaaaaggtcactcttatgttgatggatcaa
ggaccttctcggcgccacttaggagatgcgttcaagccagaccccaacagcagtagtttc
aagaaacccactggggaaatgaatattgcatctggttgcccagtctttgttgcacaaact
gttctagaaaatggaacatatattaaagatgatactatttttattaaagtcatagtggat
acttcggatctaccagacccctga
DBGET
integrated database retrieval system
