Chloracidobacterium thermophilum: Cabther_A0908
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Entry
Cabther_A0908 CDS
T01629
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ctm
Chloracidobacterium thermophilum
Pathway
ctm01501
beta-Lactam resistance
ctm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ctm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Cabther_A0908
01503 Cationic antimicrobial peptide (CAMP) resistance
Cabther_A0908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctm03036
]
Cabther_A0908
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctm02000
]
Cabther_A0908
01504 Antimicrobial resistance genes [BR:
ctm01504
]
Cabther_A0908
Chromosome and associated proteins [BR:
ctm03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Cabther_A0908
Transporters [BR:
ctm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Cabther_A0908
Antimicrobial resistance genes [BR:
ctm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Cabther_A0908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
DUF4140
DUF6518
Uds1
Motif
Other DBs
NCBI-ProteinID:
AEP11665
UniProt:
G2LEK2
LinkDB
All DBs
Position
1:1080280..1081497
Genome browser
AA seq
405 aa
AA seq
DB search
MSSWWKRIAVVVGVIFGVAGLLWLGSRLASHKPSAAAENRPVLTANVSREVVRRQPYPRV
WRIAGTLRPREVASLSAEVTARVTSVAVRLGDSVRAGQRLVTLDAALPTAGLATSQAEVE
ALKNATEAIRRRIEAAEANVRGARAERDLAQTLYERQEKLFVTGDVPRQSRDIAEGRLKA
AEAALEAAERQLAAEQAELARAQAQVAVGQQRRREAETQVAQTQIVAPFAGRIAARLVDP
GALAAPGVPLLVLESVGPLRAVAEVEAEPAAALRLGQTLRIELPGGEVVDGTLVEQSPAA
DPVTRTVTIKVELPPSARASSGMFVRVLIPRDIRDVLTVPAAAVAEQGGLQSVFVVDAAS
IVRRRIITVGERLDGRVEVLTGLREGETVVFGHAELRDGVKLSAP
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctggtggaagcgaatcgccgtcgtggttggagttatttttggagtggctgga
ctcctgtggctgggcagtcggctggcctcccataagccatcggcggcggctgaaaatcgt
cccgtgctgacggcgaatgtcagccgggaagtcgtgcgccggcagccctatccgcgagtg
tggcggattgcggggacactccggccgcgggaggtcgccagcctgtccgctgaagtgacg
gcgcgtgtgacatccgttgccgtcaggcttggcgacagcgtccgcgccgggcagcgtctg
gtgacgctcgatgccgccctcccgacagccggactggcaaccagccaggcggaagtcgaa
gccctgaaaaacgcaaccgaggccatccgccgccggattgaagcggctgaagccaacgta
cgcggggcccgcgccgaacgcgatctggcccagaccctctacgaacggcaggaaaagctc
tttgtcactggcgatgtgccccggcagagccgcgacattgctgaaggccggctcaaggcg
gctgaggctgcccttgaagctgccgagcggcagttggcggccgagcaggcggaactggcc
cgcgcccaggcgcaggttgccgtcggacagcaacgccgccgcgaagccgaaacccaggtg
gcgcagacccagattgtcgcgccttttgccggacgtattgccgcgcgcctggttgatcct
ggtgcgctggctgcacccggcgtgccactgctcgtcctggaatcggttggcccgttgcgc
gccgtcgctgaagtcgaagccgaaccggcagcggccctgcgccttggacaaaccctgcgg
attgagctgcccggtggggaagtggtggacggaacgttggttgaacaaagcccggcggct
gatccggtgacgcgcaccgtcaccatcaaggttgaactgccgccgtcggccagggcctcc
agcggcatgtttgtccgcgtcctgataccgcgtgacatccgcgatgttctgaccgttccg
gcagcggccgtcgctgagcagggtggattgcagagcgtctttgtcgtggacgcagccagc
atcgtccggcggcgcatcatcaccgtcggcgagcggcttgacggccgggtggaagtgctg
acgggactgcgtgaaggcgaaaccgtggtgtttggccacgctgagttgcgcgatggcgtc
aagctgtcagcgccataa
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