Candida tropicalis: CTRG_03156
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Entry
CTRG_03156 CDS
T01115
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
ctp
Candida tropicalis
Pathway
ctp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTRG_03156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_03156
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CTRG_03156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
NACHT
AAA_29
AAA_15
AAA_23
AAA
RsgA_GTPase
AAA_13
AAA_27
AAA_16
AAA_22
AAA_28
AAA_33
Motif
Other DBs
NCBI-GeneID:
8299784
NCBI-ProteinID:
XP_002548859
UniProt:
C5MAR4
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MSTSEKDNTLAIEVTDLTYEFPGSKKIGLENFNLSIPWGTTNLVVGPNGAGKSTLLRILA
GKTLIKKGHLKLGGFDPFHFSSQRHEQHNSDINSYMTYLGTEWATNSIIKRDIPVNLLLA
SIGGETYEDRRNLLIDILDIDPSWSMLNISDGERRRVQIAMGLVKPWKLLLLDEVTIDLD
VVVRSKLLEYLKQECITRNCTVVYATHIFDGLGHKWCDRVIHIDAGVKLNDVNIKDIEFV
DDNGKVEVGKDKIIVGKAESLHPLALYWLNQDLTRRGTREDEKVKMSQRHNDWINSRDGK
YFDADDSKLAQYFKNTRSTK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactagtgaaaaagacaatactttagctattgaagtcacagatcttacgtatgag
tttcctggaagtaagaaaataggattagaaaattttaatttatcaataccttggggtaca
acaaatttagtagttggacctaatggagcaggtaaatcaacattacttcgaattttagca
ggtaaaacattaattaaaaaaggacatcttaaacttggaggatttgatcctttccatttt
tcatcacaacgtcatgaacaacataattcagatataaatagttatatgacttatttaggt
actgaatgggctaccaattcaattattaaaagagatattcctgttaatttattattggct
tcaattggtggagaaacctatgaagatagaagaaatttattaattgatattttagatatt
gatccaagttggtcaatgttgaatataagtgatggtgaaagacgtcgtgtacaaattgct
atgggtttggttaaaccttggaaattgttattattagatgaagttactattgatttagat
gttgttgttagactgaaattattggaatatttgaaacaagaatgtattactagaaattgt
actgttgtttatgcaactcatattttcgatgggttaggtcataaatggtgtgatagagtt
attcatatagatgctggtgttaaattaaatgatgttaatattaaagatatagaatttgtt
gatgataatggtaaagtagaggttggaaaggataaaatcattgttggtaaagcggaatca
ttacatccattggcattatattggctaaatcaagatttaacaagaagaggaacaagagaa
gatgaaaaagttaaaatgagtcaaagacataatgattggattaattcaagagatggaaaa
tattttgatgccgatgattctaaattagcccaatattttaaaaacactagaagtaccaaa
tag
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