Chlamydia trachomatis Ia/SotonIa1: SOTONIA1_00150
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Entry
SOTONIA1_00150 CDS
T02565
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ctrh
Chlamydia trachomatis Ia/SotonIa1
Pathway
ctrh03030
DNA replication
ctrh03410
Base excision repair
ctrh03420
Nucleotide excision repair
ctrh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SOTONIA1_00150
03410 Base excision repair
SOTONIA1_00150
03420 Nucleotide excision repair
SOTONIA1_00150
03430 Mismatch repair
SOTONIA1_00150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctrh03032
]
SOTONIA1_00150
03400 DNA repair and recombination proteins [BR:
ctrh03400
]
SOTONIA1_00150
Enzymes [BR:
ctrh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
SOTONIA1_00150
DNA replication proteins [BR:
ctrh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SOTONIA1_00150
DNA repair and recombination proteins [BR:
ctrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
SOTONIA1_00150
NER (nucleotide excision repair)
GGR (global genome repair) factors
SOTONIA1_00150
MMR (mismatch excision repair)
DNA ligase
SOTONIA1_00150
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SOTONIA1_00150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
HHH
HHH_3
DNA_ligase_ZBD
PTCB-BRCT
Transposase_20
BRCT_2
RlmA_N
Motif
Other DBs
NCBI-ProteinID:
CCP58602
LinkDB
All DBs
Position
164231..166222
Genome browser
AA seq
663 aa
AA seq
DB search
MGAVSRDDYIALCTELVEHDRRYYVLNQPTISDYSYDVKMRELQEIEVQHPEWKVSWSPT
MYLGDRPSGQFPVVPHSSPMLSIANVYSLQELEEFFSRAEKLLGYSPGYSLELKIDGIAV
AIRYEKRLFAQALSRGNGVKGEDITANVSTIRSLPMRLPQEAPEDLEVRGEVFLSYEAFE
ELNACQREQGKLEFANPRNAAGGTLKLLSSKEAAKRKLDLSVYGLITEQKKRSHFENLQL
CSQWGFFVAGMPKQCRSRQEVVERIREIEEMRVALPMAIDGVVIKVDNIAHQDRLGLTSK
HYRWAIAYKYAPERAETILEDIVVQVGKTGILTPVAELAPVFLSGSRVSRASLYNQDEIE
KKDIRIGDSVYVEKGGEVIPKIVGINLAKRSLESEPWKMPSLCPVCHEPVVKEKVSVRCI
NPLCSGGMLEKICFFASKSALNIDHLGEKVVTKLFEVGLISSCSDIFALTEEDLKQVPGF
KDRSIQNLLASIAGAKKVTLDRLLTALSIPFVGSSGAIALADHFGTLDKVIEASLDELMS
IEGIGPKVAASIVAFFSKHENREEIRRMQELGVQVLSKQSDKEAPLQGKVFVLTGTLQQM
TRTQAEERIRSLGGKVSSSVSKSTYAVIAGSEAGGKLKKAQDLGLSIWNESELLRILDAK
SVS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgtatctcgagatgattatattgctttatgcacagaattagtggaacatgac
cgacgctattatgtgctcaatcaaccgacgatttctgattacagctatgatgtgaaaatg
cgagagcttcaagaaatagaagttcagcatccggaatggaaggtttcatggtctcctacc
atgtatttgggggatcgtccttcaggacagtttcctgtggttcctcattctagccccatg
ttgtctatagcgaatgtatactcattgcaagagctagaggaatttttttcccgtgcagaa
aaattattggggtactctcctggatattctttagaactcaaaattgatggaattgctgtc
gccattcggtacgagaagcgattgtttgctcaagctttgagtcgggggaatggggtaaaa
ggagaagatattacagctaatgtcagtactatacgctctttacctatgagactccctcaa
gaggctcccgaggatctagaagtgcgaggagaagtgtttctttcatatgaagcgtttgaa
gagctcaatgcttgtcaacgggaacaagggaaactggaatttgctaatcctcgtaatgca
gctggaggaactcttaagcttttatcttctaaggaagctgctaagcgtaaattagacttg
tctgtttatgggttgatcacagagcaaaaaaaacgctcacactttgaaaatcttcagtta
tgctctcaatggggatttttcgttgcagggatgccgaaacaatgccgttcgagacaagag
gtggtagaacgtattcgagagatagaggagatgcgcgtagcgctcccgatggctatcgat
ggagtcgtcattaaagtagacaatattgcacaccaggatcggctgggtttgacgagcaaa
cattatcgttgggcgatagcttataaatatgctccagaaagagcagaaacgattttggag
gatattgtcgttcaagtagggaaaacgggtattcttactccggttgccgagttagctcct
gtttttttatctgggagccgcgtgtccagagcatccttatacaaccaggatgagattgaa
aaaaaagatattcgcatcggagattcggtgtatgtcgaaaaaggaggagaggttattccc
aaaattgttgggattaatttggctaagcgttcattagagagcgagccttggaaaatgcca
agcctgtgtcctgtatgtcatgaacctgttgttaaagagaaggtgtcggtgcgttgtatc
aatccactttgttcaggggggatgctagaaaagatctgtttctttgcaagtaagagcgct
ttaaacatagatcatttgggagagaaggtcgtaactaaattattcgaagtaggtctcatt
agttcttgttcggatatatttgctcttacagaagaagatttgaaacaggtccctgggttt
aaagatcgttctatacagaatttattggcaagcattgccggagccaaaaaggtgacatta
gatcggcttttaacggctctttctattccttttgtggggagctctggtgccatagctctg
gcagaccacttcggaactctggacaaagtaatcgaagcttctttagatgagctgatgtct
atagaggggattggtcctaaggtagctgcatcgatcgtcgcgttcttctcgaaacatgag
aatagagaggaaattcgtcggatgcaagagctaggagttcaggttctttctaagcaatcc
gataaagaggctcctttacaaggaaaagtgtttgttcttacggggactctccaacagatg
acgagaacgcaagcagaggagcgtatccgctccctaggggggaaagtgagctcttcggta
tcgaagagcacatatgccgtcatagcgggtagcgaagctgggggtaaattgaaaaaagct
caagatttaggtttaagtatttggaacgagagcgaattattaagaattcttgacgcaaaa
tcggtctcctga
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