Comamonas thiooxydans: CtCNB1_0349
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Entry
CtCNB1_0349 CDS
T01109
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ctt
Comamonas thiooxydans
Pathway
ctt01501
beta-Lactam resistance
ctt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CtCNB1_0349
01503 Cationic antimicrobial peptide (CAMP) resistance
CtCNB1_0349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctt03036
]
CtCNB1_0349
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctt02000
]
CtCNB1_0349
01504 Antimicrobial resistance genes [BR:
ctt01504
]
CtCNB1_0349
Chromosome and associated proteins [BR:
ctt03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CtCNB1_0349
Transporters [BR:
ctt02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CtCNB1_0349
Antimicrobial resistance genes [BR:
ctt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CtCNB1_0349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
ACY31095
LinkDB
All DBs
Position
complement(376080..377396)
Genome browser
AA seq
438 aa
AA seq
DB search
MHPMYEANQAPDNQSHSAASGTRSMVIGLSLAAALGLVACSDKNAEAQKAQAAAQAQPPE
VGVVTVSMQNVPLISDLPGRLEPSRIAQVRARAAGIVQKRLFQEGSDVKAGQALFQIDNT
PYKANLQSAQATLAQAEANLAQASATARRYKPLVEANAISKQEYDTAIANEKAALAQVAA
GKAAVTNANVNLGYASVTAPISGRIGRALVTEGALVGQGEATQLATIQQVNPLYVNLTQS
SSDIMRMREALSSGKLAKVGDNAARVHVYLDDGKEYAHTGKLLFTDLTVDPTTGQVSVRA
ELPNPDGLLLPGTYVRVHLEQAQVENAALIPQQAVTRNEKGNFVMIVAEDGSVAPRPVQI
SQSSGNNWVVTSGLKAGEKVMVDGLIKVGMGAKKVKPVEINNAAAGAPAQPSAAAPAAPA
QEKAATPAEGAGEGQAAK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcacccgatgtatgaagcaaaccaggctcccgacaatcagtcccattcagccgcatcc
ggcacccgctccatggtcataggcctgagcttggctgcggcactgggcctagtcgcatgc
agtgacaaaaacgcggaagctcaaaaagcacaagcagccgctcaggcacagccacccgaa
gttggtgtggtgacggtatccatgcagaacgtgcctttgatctccgatctgccaggccgc
ctggagccatcgcgcatcgctcaggttcgcgcgcgcgctgccggcatcgtgcaaaagcgc
ctgttccaggaaggctcggatgtcaaggctggccaagccctgttccagattgacaacacc
ccgtacaaggccaacctgcagagcgctcaggcaaccctggcacaggccgaagccaatctc
gctcaggcatctgccaccgcacgccgctacaagcccctggtggaagccaatgccatcagc
aagcaggagtacgacaccgccattgccaacgaaaaggcggcactggcacaagttgcggca
ggcaaggcggctgtcaccaatgccaatgtcaacctgggctatgccagcgtgaccgccccc
atctccggacgcatcggccgcgccctggtgacggaaggcgctctggtcggccagggcgaa
gccacgcagctggcgaccattcagcaggtcaacccgctgtacgtgaacctgacccagtcc
tcttccgacatcatgcgcatgcgcgaagcgctcagttccggcaagttagcaaaggtaggt
gacaacgccgcgcgggtccacgtctatttggacgatggcaaggagtacgcacacaccggc
aagctgctgttcaccgacctgaccgtggacccgactaccggccaggtcagcgtgcgcgcg
gagctgcccaatcccgacggactgctgttgcccggcacttatgtgcgcgtgcacctggag
caggcccaggtcgagaatgccgcgctgattccgcaacaagccgtgacccgcaacgaaaag
ggcaacttcgtcatgatcgtggccgaggatggctccgtggcaccgcgccccgttcagatc
agtcagtccagtggcaataactgggtcgtcacatccggcctgaaagcgggagaaaaagtc
atggtggacggcctgatcaaggtgggcatgggggccaagaaggtcaagcccgtcgagatc
aacaatgcggctgccggcgcaccagcacaaccctctgctgcggcccccgccgcacctgcg
caagagaaagccgccacaccagccgaaggtgctggcgaaggccaggcagccaagtaa
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