Comamonas thiooxydans: CtCNB1_4127
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Entry
CtCNB1_4127 CDS
T01109
Name
(GenBank) transcriptional regulator, TraR/DksA family
KO
K06204
RNA polymerase-binding transcription factor
Organism
ctt
Comamonas thiooxydans
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctt03000
]
CtCNB1_4127
03021 Transcription machinery [BR:
ctt03021
]
CtCNB1_4127
03009 Ribosome biogenesis [BR:
ctt03009
]
CtCNB1_4127
Transcription factors [BR:
ctt03000
]
Prokaryotic type
Other transcription factors
Others
CtCNB1_4127
Transcription machinery [BR:
ctt03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
CtCNB1_4127
Ribosome biogenesis [BR:
ctt03009
]
Prokaryotic type
rRNA transcription factors
CtCNB1_4127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
Motif
Other DBs
NCBI-ProteinID:
ACY34873
UniProt:
A0A454XRU2
LinkDB
All DBs
Position
complement(4634667..4635410)
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AA seq
247 aa
AA seq
DB search
MTAVKSNLPKAAAKAAAAAVHPRSVETSLVDAALDNPVLVPAAAGESSKSSRSKRSASPP
ARQPETDVPPLAASAVKAAATMRDTKAMTNTKQAVPKKDPKLANAWKTKSVEELTDAEVL
AMSDDDYMNDAQLAYFRRKLVALKNDMHVNAGETAENLREDTVVVPDPADRATIEEEHAL
ELRTRDRERKLLKKIDQSIARIDAGDYGYCDETGEPIGVGRLLARPTATLSLEAQQRREL
KQKMYGD
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctgtgaaaagtaatctgcccaaggctgcagccaaagctgcggcagcggctgtg
cacccccgcagcgtcgagacctctttggtggacgccgcgttggacaacccggtgctggta
cctgcagcagcgggagaatcttccaaatcgtccagatccaagcgttctgcatcgcctcca
gcgcggcagcctgaaacagatgttccgcccttggcagcttcggcagtcaaggctgcggca
accatgagagatacgaaagcaatgaccaacacaaagcaagctgtgcccaagaaagatccc
aagctggccaacgcctggaagaccaagtcggtagaggagctgaccgatgctgaagtgctg
gccatgtctgatgacgattacatgaacgacgcccagctggcctacttccgtcgcaagctg
gtcgcgctcaagaacgatatgcatgtgaatgcgggcgagactgcggaaaacctgcgtgaa
gacaccgtcgtggtgcccgatcctgccgatcgtgccaccatcgaggaagagcacgctctc
gagctgcgcacccgtgaccgcgagcgcaagctgctcaagaagatcgatcagtccattgcc
cgcattgatgccggcgactacggctactgcgacgaaaccggcgagccaatcggagtggga
cggctgctggctcgccccaccgctacactgtcgctggaagcccagcagcgccgtgaactc
aagcagaagatgtacggcgattga
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