KEGG   Cronobacter turicensis: CTU_17050
Entry
CTU_17050         CDS       T00999                                 
Symbol
ycfD
Name
(GenBank) Uncharacterized protein ycfD
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
ctu  Cronobacter turicensis
Brite
KEGG Orthology (KO) [BR:ctu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ctu03009]
    CTU_17050 (ycfD)
Enzymes [BR:ctu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     CTU_17050 (ycfD)
Ribosome biogenesis [BR:ctu03009]
 Prokaryotic type
  ribosomal protein modification factors
   CTU_17050 (ycfD)
SSDB
Motif
Pfam: JmjC_2 WHD_ROXA Cupin_1 Cupin_2 AraC_binding
Other DBs
NCBI-ProteinID: CBA30020
UniProt: C9Y1L5
LinkDB
Position
complement(1800024..1801145)
AA seq 373 aa
MDYHVEINWPDFIERYWQKRPVVLKRGIKNFVDPLSPDELAGLAMENEVDSRLVSHQDGK
WEVSHGPFQSYDHLGETNWSLLVQAVNNWHEPSAALMRPFRALPDWRIDDLMISFSVPGG
GVGPHLDQYDVFIIQGVGRRRWRVGEKVPMKQHCPHPDLLQVAPFEALIDEELEPGDILY
IPPGFPHEGYSLENSMNYSVGFRAPSGRELISGFADYVLQRELGSQRYSDPDVPARECAA
DIVPAEVEKLREMMLDLIRDPANFNEWFGEFITQSRHELDVSPPEPPYQPDEIYDALKQG
DTLVRLGGLRVLRIGDEVFVNGERLDTPHRPALHQLANEMVLNEAMLGEALEDPSFLAML
AALVNSGYWYFAD
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggactaccacgtagagataaactggcccgatttcattgagcgctactggcaaaaacgc
ccggtggtgttaaagcgcggcattaagaattttgtcgacccgctctccccggacgaactg
gccggtcttgcgatggagaacgaggtggacagccgcctggtcagtcatcaggacggtaaa
tgggaagtcagtcacggcccgttccagagctacgatcatttaggcgaaaccaactggtcg
ctgctggtgcaggcggtcaataactggcacgagccgagcgccgcgctgatgcgcccgttc
cgcgccctgccggactggcgcattgacgatctgatgatctccttctcggtgccgggcggc
ggcgtcggcccgcacctcgatcagtatgacgtgtttattatccagggcgtcggccgtcgc
cgctggcgcgtgggcgagaaagtgccgatgaaacagcactgcccgcacccggatctactc
caggtcgcgccgtttgaagcgctgatcgatgaagagctggagccgggcgatattctctat
attccgccgggattcccgcacgaaggctattcgctggaaaactcgatgaactattcggtt
ggtttccgcgcgccgagcggccgcgagcttatcagcggcttcgccgattatgtgttgcag
cgcgagctcggcagccagcgctacagcgatccggacgtgccggcccgtgaatgtgccgcg
gatattgtgccggcggaagtcgaaaaactgcgcgagatgatgctggatctgattcgcgat
ccggcgaatttcaacgagtggtttggcgagtttatcacccagtcgcgtcacgagctggat
gtgtcgccgccggagccgccgtatcagccggatgaaatttatgacgcgctgaaacagggc
gatacgctggtgcgcctcggcggcctgcgcgtgctgcgtattggcgatgaggtctttgtg
aacggcgagaggcttgacacgccgcaccgcccggcgctgcatcagttggccaatgaaatg
gtgctgaatgaggcgatgctcggcgaggcgctggaagacccgtcgttcctggcgatgctg
gcggcgctggtgaacagcggttactggtatttcgcggattag

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