Cronobacter turicensis: CTU_33320
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Entry
CTU_33320 CDS
T00999
Symbol
ygcF
Name
(GenBank) Uncharacterized protein ygcF
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
ctu
Cronobacter turicensis
Pathway
ctu00790
Folate biosynthesis
ctu01100
Metabolic pathways
Module
ctu_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
ctu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
CTU_33320 (ygcF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctu03016
]
CTU_33320 (ygcF)
Enzymes [BR:
ctu01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
CTU_33320 (ygcF)
Transfer RNA biogenesis [BR:
ctu03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CTU_33320 (ygcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
CBA33277
UniProt:
C9XZ32
LinkDB
All DBs
Position
complement(3481252..3481923)
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AA seq
223 aa
AA seq
DB search
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWETLADREVSLFSIIAK
TKESDKWGSASPEELLAAIERQAYTARHVVITGGEPCIHDLLPLTELLEAHGYSCQIETS
GTHEVRCTTGTWVTVSPKVNMRGGYEVLDQALMRADEIKHPVGRMRDIEALDELLARLHD
ERQRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacccgattaatgagatgtttcagaccctgcagggcgagggttattttaccggc
gtgcccgccatttttattcgtctgcagggatgccccgtaggttgtgcctggtgcgatacc
aaacacacctgggagacgctcgccgatcgggaagtgtcgcttttcagcattatcgcgaaa
accaaagagagcgataaatggggttcggcgagtccggaagagctgctggcggcgattgag
cgccaggcctataccgcgcgccatgtggttatcaccggcggtgagccgtgtatccacgat
ctgctgcccttaacggagcttctggaagcgcacggttatagctgccagattgaaaccagc
ggcacccatgaggtgcgctgcaccacagggacctgggtgaccgtatcgccgaaggtgaat
atgcgcggcgggtacgaggtgctggatcaggcgctgatgcgtgccgatgaaatcaagcac
ccggtagggcgtatgcgtgatatcgaggcgctggatgaactgctggcgcgcctgcatgac
gaaagacagcgggtaattgcgcttcagccgattagccagaaggacgatgcgacccgcctg
tgcattgagacctgtatcgcccgcaactggcggttgtcgatgcagacgcacaagtatctg
aatatcgcataa
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