Cyprinodon tularosa (White Sands pupfish): 119771978
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Entry
119771978 CDS
T07496
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctul04040
]
119771978
Ion channels [BR:
ctul04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119771978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
Ion_trans
LSDAT_prok
PCF11_RFEG_rpt
DUF1189
Motif
Other DBs
NCBI-GeneID:
119771978
NCBI-ProteinID:
XP_038124144
LinkDB
All DBs
Position
Unknown
AA seq
1552 aa
AA seq
DB search
MGFMASKISSAGVMSDSPRVQTSAGVMSDSPGVQTSAGVMSDSPGVQTSAGVMSDSPRVQ
TSAGVMSDSPGVQTSAGVMSDSPRVQTSAGVMSDSPGVQTSAGVMSDSPRVQTSAGVMSD
SPRVQTSAGVMSDSPRVQTSAGVMSDSPRVQTSAGVMSESPRVQTSAGVMSDSPRVQTSA
GVMSDSPRVQTSAGVMSESPGVQTSAGVMSDSPRSWIPKIIKKRVCTTYVQDTLSNGALC
QCGVVREVHDSVATGDYFGAAIVTQWDSRQHSSEYPTDAFGELEFAGAGRRHSHFLRLSC
DTPPQIIYTLMTAHWRLPLPNLVVSVVGGEGHEKIKPWVRDILRKGLIRAAQNTETWILM
GGLREGVSRCVGEAVKDHGAVASAESQKKVIAIGVAPWGLVYNRKQLVNAQGSFPARYYV
QNTTHDTNCLDNSCQAFLLVDDGSVGQRGGEAAFQANLEDYISHQRTGIWGSGSIEIPVL
CMLVSGEASVLERLDMSLKKLTPWLVLAGSGPAADFISDLVDDQSAVMLSRTSAPADEEA
VSADICERVRDKVCKHFPDQAEPEKLVNSALSIYQGRDLITVYDGKQEGADDFDTVLLKA
LVKASKRVSSKASEYKEELKLAVAWNRVDIAKAELFNGDILWKYDELKDSMTDALINDKP
QFVRLFCENGLNILEYLTHERLESLYRSLSDSLLVYNLLKRLLSERQSLAGSLPSVDGAA
PDVWMNTNTSHSPAVSASGLSLFEVSRLLQDLLGDVCEPFYYSALELDPRTGTRKSLKQV
NKILQGECTYRKQACPSPWEALFIWAVLQNRSEMAIYFWEMSGESVLSALGACKILRELS
KLENETESKLGMKKLAQRFENLANDVFGECYQSSESRTFTLLIRKSPVWGGATCLQMATA
ADARLFFSHDGVQSLLSQIWWGDLERSTDVWKLILAFFVPPLIYTNLIDFREPEEEINPL
AVQHIRESDSIEGNDATVLSLADIVHNEEELEELKTLKENLKGPVQNNSRRPFIVSRWRQ
FWYAPVTSFLGNVLMYFLFLCLFAYVLLVDFKPPPPEGPSSLEFVLYFWVFTLVCEEIRQ
TFFGGSLFLLQRMKKYIQDNWNKCDLTAILLFILALLCRIFPWSFNFGRAVMAIDYMVFA
LRLIHIFAIHKQLGPKIIILGKMVKDVFFFLFFLAVWLMAYGVAHQALLYAYDPRPNWIF
RRVFYRPYLHIFGQIPIQEMDADKMEDFRCSSNHTEIEAGAEPCPSIYANWLLVILLVIY
LLFTNIVLVNLLIAMFSYTFSKVQEHSDTYWKFQRYSLIVEYHSRPCLAPPFIIFSHLHV
LIKRHIRRIPSVKREHFGEMEGGGREGNYARLSLTPGGALGDRSDEKRFKNPYDEDYSEV
RDVARGNHEGPVHRGLGGSQRRRPLRPDRRALKLALGTWNVTSLAGKEPELVREVERYRL
EIVGLASTHMWQCDWLTLYWALMLPIIDAEHTECFASCCGTELSLMKSWNDLINGAAGFC
RVDSVLKQMTEIRDHDRRLRLLEAQVSKPNAPIRLLWPPQVSIVLGPIAGSS
NT seq
4658 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcatggcatccaagatctcctcagcaggtgtaatgtctgactcccccagggtg
cagacctcagcaggtgtaatgtctgactcccccggggtgcagacctcagcaggtgtaatg
tctgactcccccggggtgcagacctcagcaggtgtaatgtctgactcccccagggtgcag
acctcagcaggtgtaatgtctgactcccccggggtgcagacctcagcaggtgtaatgtct
gactcccccagggtgcagacctcagcaggtgtaatgtctgactcccccggggtgcagacc
tcagcaggtgtaatgtctgactcccccagggtgcagacctcagcaggtgtaatgtctgac
tcccccagggtgcagacctcagcaggtgtaatgtctgactcccccagggtgcagacctca
gcaggtgtaatgtctgactcccccagggtgcagacctcagcaggtgtaatgtctgaatcc
cccagggtgcagacctcagcaggtgtaatgtctgactcccccagggtgcagacctcagca
ggtgtaatgtctgactcccccagggtgcagacctcagcaggtgtaatgtctgaatccccc
ggggtgcagacctcagcaggtgtaatgtctgactcccccaggagctggattccaaaaatc
atcaagaaaagagtctgcactacctatgtccaagacactttgagtaatggagcgctctgc
cagtgcggcgttgtgcgggaagtccacgactcggtggccacaggagactactttggagca
gcgattgttactcagtgggacagcaggcagcactcgtctgaatatcccactgacgctttt
ggagaactggagtttgctggagctggacgcagacatagccattttctgcggctttcatgc
gacacacctccacagatcatctatactctgatgacagcacactggcgcttgcccttaccc
aacctggtggtttcagtggtggggggtgaggggcatgaaaagatcaagccatgggtgaga
gacatcctgagaaaagggctgatacgggctgcacagaacacagagacctggattttgatg
ggaggtctgagagagggagtgtcccgctgcgtaggagaggctgtgaaagaccatggggcc
gtggcttcagctgaatcccagaaaaaggtcattgccatcggagtggccccttggggtctg
gtgtacaacaggaagcagcttgtcaatgcccagggaagtttcccagctcggtattacgtc
cagaacacgacacatgacaccaactgtttggacaacagctgccaagccttcctcctggtg
gacgatggcagcgttggtcagcgaggtggagaggcagcctttcaagctaatctggaggac
tacatttcccatcagcgcacaggcatttggggcagcggcagtattgaaatcccagtcctc
tgcatgctagtgtcaggagaggccagtgttctggagagattagacatgtctctgaagaag
ctgacgccctggctggttctggctggttccggtccagcagctgattttattagcgacttg
gttgacgaccagtcggctgtgatgctcagccgtacctctgctccagctgatgaagaggcc
gtcagtgcagacatctgcgaaagagtccgtgacaaagtctgcaaacacttcccagatcag
gccgagccagaaaaactggtcaacagtgctctaagtatttatcaggggagagacctcatc
actgtttacgatgggaagcaggagggagccgatgactttgacacagttcttctaaaagca
ctggtcaaagctagtaagcgtgtgtccagtaaggccagtgagtacaaagaggagctaaaa
ctggctgtggcctggaatcgagtggacatcgccaaagctgaactcttcaatggagacata
ctatggaagtacgacgagctcaaggactcgatgacggatgctctgatcaatgataagccc
cagtttgtgcgtctcttttgtgaaaatggtctcaacatcctggaatatttgacacatgag
cgcttggagagtttatatcgctcactgtcagacagcttgctggtttacaatctgctcaag
aggcttttgagtgaaaggcagagcctggctggatccctgccctctgtggatggagctgca
ccagatgtctggatgaacaccaatacttctcacagtcctgctgtctcagcatcaggtctt
agcctgtttgaggtctcccgtctgctgcaggaccttctaggtgatgtctgtgagccgttc
tactacagtgctttggaactggaccctagaactggcactagaaaatcactaaagcaagtc
aacaagatcctgcagggggagtgtacctaccggaagcaggcctgcccctcaccctgggaa
gctctcttcatttgggctgttttacagaaccgctctgaaatggcgatatacttctgggag
atgtcaggagaatctgtgctgagcgctcttggtgcctgtaagatattgagggagctttcc
aagctggagaatgaaacagagagcaagcttggcatgaaaaaactcgcacagaggttcgag
aacctggcaaatgatgtatttggtgagtgttaccaaagcagcgagagtcgcaccttcaca
ctccttataaggaagtctcctgtgtggggcggggcaacatgcctacagatggctactgca
gcagatgcccgccttttcttcagccatgatggtgttcagtctctgctgtctcagatctgg
tggggcgacttggagaggagcactgatgtctggaagctgattcttgccttctttgtacct
cctttgatctacaccaacctcatcgacttcagggaaccagaggaggagataaatcctttg
gcagtccagcatatcagagaaagtgacagcattgaggggaacgatgccaccgtcctctcc
ctcgcagacatcgttcataatgaagaagagttggaagaactgaagactttgaaagaaaac
ttgaaaggtccggtgcagaataactccaggagaccgtttattgtgtcaaggtggagacag
ttctggtacgcgcctgtcacctccttcctgggcaatgtgctgatgtacttcctgttcctt
tgcctgttcgcctatgttctgctggtggacttcaagcctccgcccccagagggcccgtct
tctctggagtttgtgctctacttctgggttttcacattagtatgtgaagagatccgacag
actttttttggaggcagtttgtttttactccaaaggatgaagaaatacatccaggataac
tggaacaagtgtgacctcacagctattcttctttttattttggctctactgtgcagaata
tttccctggtcatttaattttggccgtgctgtgatggccattgactacatggtttttgcc
ctgcgtctaatccacatctttgccatccacaaacagcttggacccaaaatcatcattctt
ggaaaaatggtgaaagatgttttcttcttcctcttcttcctggctgtttggctcatggcc
tatggagtcgctcatcaagcactcctctacgcctacgacccccgccctaactggatattc
cgcagagtcttctacaggccatatttacacatatttgggcaaataccaattcaggaaatg
gatgctgataaaatggaggacttcaggtgctcttcaaaccacacagagatcgaagcagga
gctgaaccctgtccgagtatctatgctaactggttgctggtcatcctcctggtcatctat
ctgctgttcaccaacatagtgctggtcaacttgctcatcgccatgttcagctacaccttc
tccaaagtacaggagcacagcgacacctactggaagtttcagcgctacagcctcatcgtg
gagtaccactccagaccctgcctggctccacccttcatcatcttctcccatctccacgtt
ctcatcaagagacacatccgcaggattccttctgtcaagagagagcactttggtgagatg
gagggggggggcagagagggaaattatgctcgactatctctaacgccggggggggctctg
ggtgacaggtcagacgaaaaacggttcaaaaacccttatgacgaggactacagcgaggta
cgtgacgtcgcccgggggaaccatgagggaccggtgcatagaggattgggcggcagtcag
aggcggagacctctgcgacctgatcggcgggcgcttaaactggctctggggacgtggaac
gtcacctcactggcggggaaggagcccgagcttgtgcgggaggtggagcgataccggcta
gaaatagttgggctcgcctctacgcacatgtggcagtgtgactggttaaccctttactgg
gctctgatgctgccaatcatagatgcagagcacacagaatgttttgcatcatgttgtgga
actgaattgtctttaatgaagtcttggaacgatctaatcaatggagctgctggtttctgc
agagtggacagcgttctgaagcagatgacagaaatccgagaccacgaccgacggctacgt
ctgctggaggcacaggtcagcaaaccaaacgcacccatcaggcttttatggcctccacag
gtttccatagttcttggtccaatcgcaggctcatcaca
DBGET
integrated database retrieval system
