Cyprinodon tularosa (White Sands pupfish): 119772942
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Entry
119772942 CDS
T07496
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119772942 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119772942 (kdm2aa)
04121 Ubiquitin system [BR:
ctul04121
]
119772942 (kdm2aa)
03036 Chromosome and associated proteins [BR:
ctul03036
]
119772942 (kdm2aa)
Enzymes [BR:
ctul01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
119772942 (kdm2aa)
Transcription factors [BR:
ctul03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
119772942 (kdm2aa)
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119772942 (kdm2aa)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
119772942 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
119772942 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JmjC
JHD
F-box
Cupin_8
PHD
LRR_6
LRR_4
Mito_fiss_reg
Nop14
Motif
Other DBs
NCBI-GeneID:
119772942
NCBI-ProteinID:
XP_038125588
LinkDB
All DBs
Position
Unknown
AA seq
1229 aa
AA seq
DB search
MDDSKPRYSKRLRAGTRRRYHDDGISDEEIDGRRTFDLEEKVSSERFSSDRIVRMEGKDF
TYEFVQRGGLRDPILFEKPDGLGLKMPEPDFSVNDVKTFVGSRRMIDVMDVSTQKGTEMS
MAQWTRYYETPVSQRDKLYNVISLEFSHTKLENLVKRPTTVELIDWVDNMWPRHLKERQR
DSTNSINDMQYPKVQKYCLMSVQGCYTDFHIDFGGTSVWYHILKGRKVFWLIPPTDPSLE
LYENWVLSGKQGDIFLGDRVSDCQRIELKPGCTFIIPSGWIHAVYTPVDSMVFGGNFLHS
FNIPMQLNICNIEDRTRVPMKFRCPFFYEMCWYVLERYVYSLTKTSYLTPEFQKYSLGTA
RELQDEGSGKNEEPSGAQSEKSPSKVHLTPLELEGLWSLIGKLETLQSNKKCVPAGIQNA
STLMTHFKALLKEHANDNPKLAYTGKPIVKWPPRPSWYQPPPPPPPPPPPPAPRPKPPSA
TTVQRPQKPASMSSLRRRRVRCKRCEACIRPECGECNFCRDMKKFGGPGKLKQTCVLRQC
LSPGLPLSAVCEICKEPNQEETGDPSLTLMECSSCAQIVHPACLTVQGDGVVNKDLPSCW
ECPKCVQGITDRESKGDRADSLKRKSSSLLDARIAKIYRRHLHSQDGEDSASDDDNSSHR
RRLALSAHGGGHMSRKAFGANRRGLLRGGLSHKGSRGGLGAGGSMSGLRLKRGVAMREAG
RRGRVRLRGGSRMQRRGDDSEESDDDEDDDDDDDDDDDDYDEEEGESEEEKEYLRHKHRR
RRRDYDEDEDSEGQDYDPEEEEVDTAEDEELKKEEDEEEDGRWDSDPEPPVLLVSDLNDE
LLSGSYLTVTLQQPHRTKSQSGSIVPKLEAAMGLRSAAGGGGQQGFIQRKAAHSKPSRVR
GADSADTFTPRGPGRPRLRGSQGEKSSRTYSASSSEEDQAAAPAPSSLLSLPSFKDAGSD
RGGEKEIWVSVFRYLNRAELLACMTVCKAWYKWSCDKRLWSHIDVSRCNPLSNQALAGII
KRHPTSLDLSWTPLAMRQLNCLLTRLPGLRELRLTGLPWSCLSALVSPTLPQLQLLDLRW
CEGIREAQIKEIVTPPGLESSRSRLRNMVTLRLSGLDISESTLRLLQRHMPHLQTLDLAH
CKNITDSCITLLAAAGTHTRNNLSELTLAGCNQLSDGCLSYLKRFSSLTLLDLRGCKGVS
RRACDAFISDLSHVALFCMMEEKLIQRLD
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atggatgattcaaagccacgctacagcaaaaggctgcgggccggaactagaagacgttac
catgacgatggcatctctgatgaggagatcgatggaaggaggacgttcgacttggaggag
aaagtcagcagcgaaaggttcagttctgaccggatcgtccgcatggaaggaaaagacttc
acatatgagttcgttcagagaggaggcctgagggacccaatcctgtttgagaagcctgat
ggcctgggtctgaagatgccagaaccggacttcagcgtcaatgacgtcaagacgtttgtt
ggttccagacgcatgatagatgtgatggatgtgagcacccagaaggggacagagatgtcc
atggcccagtggacgcgttactacgagactcctgtgtctcagagagataaactctataac
gtcatcagtctggagttcagccacaccaagctggagaatctggtcaagagacccaccacg
gtggagctcatagactgggtggacaacatgtggcctcgtcaccttaaagagagacagagg
gattcaaccaactccatcaatgacatgcagtacccaaaggtccagaagtactgcctgatg
agtgtccaaggctgctacacagacttccacatcgactttggagggacgtccgtctggtac
cacatcctgaaagggaggaaggtgttctggttgattcctcctacggatccgagcctggag
ctctatgagaactgggttctgtctggaaagcagggagacatttttctgggagaccgagtg
tctgactgtcagaggatcgaactgaagccgggctgtaccttcatcatcccctcaggttgg
atccatgccgtctatacccccgtggactccatggtgtttggaggaaacttcctgcacagc
ttcaacatccccatgcagctgaacatctgtaacatagaggacagaacgcgggttcctatg
aagttccgctgtcccttcttctatgagatgtgctggtatgtgctggagcgctacgtctac
agcctcacgaagacctcttacctcacacctgagtttcagaaatactccctgggtacagct
cgtgagctgcaggacgagggttctggtaagaacgaagagccttcaggcgcccagtctgaa
aagtccccatccaaagtccatttgactcccctggagctggaggggctgtggagtctgatc
ggcaaactggagacgctgcagtccaacaagaagtgtgttccagctggaatccagaacgcc
tccacgctcatgacgcacttcaaggctctgctgaaggagcacgctaatgacaaccctaaa
ctggcgtacactgggaaacccatcgtcaagtggccgcccaggccctcatggtatcagcca
ccgccacctcctcctccacccccaccgccaccagcccctcgtcctaaaccgccctcagca
accaccgtccagcgtcctcagaaacctgcctccatgtcttcactgaggcggcgcagagtc
agatgtaagcgctgtgaggcctgcattaggccagagtgtggagagtgtaacttctgcaga
gacatgaagaagtttggaggaccagggaagctcaagcagacctgcgtgctgcggcagtgc
ctctcaccgggccttcctctgtctgctgtgtgtgagatctgcaaagagcccaatcaggag
gaaactggagacccttccctcaccctgatggagtgttccagctgtgcccagatcgtccat
cccgcctgcctcacggttcagggtgacggcgtggttaacaaagacctgcccagctgctgg
gagtgccccaaatgtgtccagggcatcactgacagagagtctaaaggagacagagcggat
tcactgaaaaggaaatcctcgtctctgcttgacgctcggatcgcaaagatctacagacgc
cacctccacagccaggatggggaggactcggccagtgacgacgataactcgtcgcacaga
aggagattggctctctctgctcacggaggcggccacatgtccaggaaggcgttcggtgcc
aacaggagaggtctgctgcggggcggcctgtcccacaaagggagcagaggggggctgggg
gcgggtggctccatgtcgggcctcagactaaagaggggcgtggccatgagggaggcgggg
cggagaggccgggtcagactccgcggaggctccaggatgcaaaggaggggcgacgactca
gaagagtcggatgacgatgaagacgatgatgatgacgacgacgacgatgatgacgattat
gatgaagaagaaggcgagagcgaggaagaaaaggaatatctgcggcacaaacacaggaga
cgcaggagggactacgatgaagacgaggatagcgaagggcaggactacgaccctgaagaa
gaggaggtggacaccgctgaagatgaagagctgaaaaaggaggaggatgaggaggaggac
ggtcgctgggattcagacccagaacctccggttctcctggtgtccgacctgaacgacgag
ctgctgagcggctcctacctgacggtcaccctgcagcagcctcacagaaccaagagccag
tcaggctccatcgtgccgaagctggaggccgccatggggctgaggtcagcagcaggggga
ggcggtcagcagggcttcatccagaggaaggcggctcattccaaaccttccagagtccga
ggtgctgattctgccgacaccttcacccccagaggacccggcaggcctcgtctgcgagga
agtcagggagaaaaaagcagcagaacgtactctgcctcttcctctgaggaagaccaggct
gctgctcctgctccgtcctctctgctgtctctgccgtcctttaaggacgcaggcagcgat
cggggcggggagaaggagatctgggtgtctgtgttcagatacctgaacagagcggagctg
ctggcctgtatgaccgtctgtaaagcctggtataaatggagctgtgacaaacgcctgtgg
agtcacatcgatgtgagtcggtgcaacccgctcagtaaccaggcgctggcgggcatcatc
aaacgccatcccacctctctggacctgtcctggacgccgctggccatgaggcagctgaac
tgccttctcaccagactcccaggtctgagggagctgaggctgaccggtctgccctggtcc
tgtctgtcagcgctggtctcccccaccctgccccagttacagctgctggatctacgctgg
tgtgaaggcatcagagaggcccagattaaagagatcgtcactcctccaggtttggagtcg
tcgcgcagcaggctgaggaacatggtgacgctgcgtctgtccggcctggacatcagcgag
tccaccctcaggctgttgcagcgccacatgccccatctgcagactctggacctggctcac
tgcaagaacataacggattcctgtatcacgctgctggcagccgctgggactcacacccgc
aacaacctcagcgagctgactctggctggttgtaaccagctgagcgacggctgcctgtcc
tacctgaagaggttctcctctctgactctgctggacctcagaggctgtaagggtgtcagc
agacgggcctgcgacgccttcatctctgacctgtcccatgttgccctcttctgtatgatg
gaggagaagctcatccaacgcctggactga
DBGET
integrated database retrieval system
