Cyprinodon tularosa (White Sands pupfish): 119773575
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Entry
119773575 CDS
T07496
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04010
MAPK signaling pathway
ctul04120
Ubiquitin mediated proteolysis
ctul04140
Autophagy - animal
ctul04144
Endocytosis
ctul04620
Toll-like receptor signaling pathway
ctul04621
NOD-like receptor signaling pathway
ctul04622
RIG-I-like receptor signaling pathway
ctul05132
Salmonella infection
ctul05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119773575 (traf6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119773575 (traf6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119773575 (traf6)
04140 Autophagy - animal
119773575 (traf6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119773575 (traf6)
04621 NOD-like receptor signaling pathway
119773575 (traf6)
04622 RIG-I-like receptor signaling pathway
119773575 (traf6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119773575 (traf6)
09171 Infectious disease: bacterial
05132 Salmonella infection
119773575 (traf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119773575 (traf6)
04121 Ubiquitin system [BR:
ctul04121
]
119773575 (traf6)
Enzymes [BR:
ctul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119773575 (traf6)
Membrane trafficking [BR:
ctul04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119773575 (traf6)
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
119773575 (traf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
TRAF6_Z2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
TRAF3_RING
RING_XB3-XBAT31
zf-rbx1
U-box
BLI1
zf-RING_11
zf-TRAF_2
DUF7310
Motif
Other DBs
NCBI-GeneID:
119773575
NCBI-ProteinID:
XP_038126511
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MKQLLTLLPFLDLPIIQMACSDNNKGGLEEDSYDGGAGGEEQSGCALAMMEKERESLLSP
LDSSGTLMSSSSGSLQAAAPLQGYDVEFDPPLESKYECPICLMALRNAIQTRCGHRFCKS
CIEKSIRDTGQRCPVDNEMLSEDQLFPDNFAKREILSLTVRCPNSGCADKMELRHLENHL
LVCQFATVPCPQCQKPVRKSYIEEHKTAECQRRPMTCPDCVTSFVYEEKELHEQHCPFAS
VMCQYCEMDLIRDQMESHCDTDCPKAPIACNFNIFGCKERMQRHDLAQHMQEFTQMHMRY
MAEFLRSLSLNGTSPKPLRTLGPSVSYEDFGAAASVSACGGPRGAASCSISSASCQPSQE
MQRLREMDGRLVKQDHQLRELIILKETQAGQLAELRRRVSMLEETVKELEAQQCHGIFIW
RLKGFSALLRNQEASMPVVEHSPGFYTGRPGYKLCLRLHLQTPNAPRCSNYISLFVHTMQ
GAFDGQLTWPFQGTIRLAILDQGPECQHHMEVMETKPDLQAFQKPINPRNPKGFGYVTFM
HLQQLSQRAYIKDDTLLIRCEVTPRFDGAFNREGPAVQPRGPEASLSRE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaattgctaacacttctcccttttctggacctcccaatcatacagatggcttgc
tctgataataataaggggggtttggaggaggacagttatgatggaggagcaggtggtgaa
gagcaatctggctgtgccttggcaatgatggaaaaagaaagggaatcccttttaagccca
ttggatagttctggcaccttaatgagcagttcatctggtagtctccaggctgctgccccc
cttcagggctatgatgtggaatttgacccacccctcgagagtaaatatgaatgccctatc
tgcctgatggccttaaggaatgcaatccaaacacgctgtggtcatcggttctgcaagagc
tgtattgagaaatctattcgtgatacaggacagcggtgccctgtggacaatgaaatgctg
tcagaagatcaactgtttcctgataattttgccaaaagggagattctatcgctaactgtt
cgttgtccaaactctggctgtgctgacaaaatggagctccgacatttagagaatcatttg
ctcgtgtgtcagtttgccactgtaccttgccctcagtgtcaaaaacctgtaagaaagagc
tacattgaggagcacaaaactgctgagtgtcaaagaagacctatgacatgcccagactgt
gtgacatcctttgtttatgaggagaaagagctccatgagcagcactgtccgtttgctagt
gtgatgtgtcaatactgtgagatggatctaatcagagaccagatggaatctcattgtgat
acagattgcccaaaagcacccattgcctgtaactttaacatctttggatgtaaggaaagg
atgcagcgccatgatttggctcagcacatgcaggagttcacacagatgcatatgcgctac
atggcagagtttttacgcagcctaagccttaacggcacgtcgcccaaaccccttcgaacg
ctagggccttctgtttcctatgaggactttggtgctgctgcttcagtgtcagcctgtggg
gggcccagaggggctgcgagctgcagcatcagctcagcttcatgtcagcccagtcaggag
atgcagaggctccgagagatggatgggcgattggtgaagcaagaccaccagctgcgggag
ctcatcatattaaaagagacacaagcagggcagcttgctgagctcaggcgtagagtctca
atgctggaggaaactgtgaaagagttggaggcccagcagtgccatgggatctttatctgg
cgcctcaaaggtttctctgccctcctgcggaaccaggaggcgagcatgccagtggttgag
cacagccctggcttctacacgggccgcccaggctacaagctgtgtctacgtttacacctg
cagacacccaacgccccacgctgctccaactacatctccctttttgtccacactatgcaa
ggagcttttgatgggcagctgacttggccgtttcaagggacgatccggctggccatttta
gaccagggacccgagtgtcagcatcacatggaggtcatggagacaaagccagacctgcaa
gccttccagaaacccataaatccacgcaaccccaaaggattcggctacgtcacctttatg
cacctgcagcagctgagtcagagagcttatattaaagatgacactctgctgatccgctgt
gaggttacgccacgctttgatggcgcatttaatcgggagggaccagccgtacagccgaga
gggcccgaagcctcactttcaagagaataa
DBGET
integrated database retrieval system
