Cyprinodon tularosa (White Sands pupfish): 119775857
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Entry
119775857 CDS
T07496
Symbol
trpc6a
Name
(RefSeq) short transient receptor potential channel 6a isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctul04040
]
119775857 (trpc6a)
Ion channels [BR:
ctul04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119775857 (trpc6a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
YVC1_C
Cmr1_C
Motif
Other DBs
NCBI-GeneID:
119775857
NCBI-ProteinID:
XP_038129897
LinkDB
All DBs
Position
Unknown
AA seq
880 aa
AA seq
DB search
MNHKPRGGNRSSQSPGNMDRSGTRSQDNLLLNDDFREEYCSAGQNLGRHSSSDRQLTARI
STVKRRQALRGPAYMFSAPLISLSDVEQRFLEAAEYGNIPEVRRMLLQIPNLNVNAVDYM
GQNALQLAVANEHLEVTELLLGRADLARVGDALLLAISKGYVRITEALLSHPSFRDANRL
TASPAQVDMLDDFYAYDEDGTRFSHDVTPVILAAHCQEYEIVYTLLSKGARIDPPHDYFC
GCDSCNYQQQYDSFSHSRSRINAYRGLASPAYLSLSNEDPVLAALELSNELAMLADIEKE
FKNDYSRLSNQCKDYVVGLLDLCRSTEEVEAILNGETASDESFDIPGRPSLTRLKLAIKY
ELKKFVAHPNCQQQLLSIWYENIPGLRQQTTAIKLLVVLAVAIGLPGLAVAYWVTPCSRV
GKVMRSPFMKFVAHASSFTIFLGLLILNAADRFAGTTLLPNMTHHQQSGSSQLKLDPPVL
HRTTTTPFTWMEILIISWVIGMIWAEVKEIWSQGPGEYLVEPWNFLDFGMLAIFLASFSC
RFSAKKQADWAQAYVYKHNKTLDQLSREKCYFILARIDWLPSDPQLVSEGLYAIAVVLSF
SRIAYILPANESFGPLQISLGRTVKDIFKFMVIFLLVFLAFMIGMFNLYSYYLGAKQNDA
FTTLEESFKTLFWAIFGLSEVKSVVINNGHKFIENIGYVLYGVYNVTMVIVLLNMLIAMI
NSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSMLGLVTAIKSMLLYV
VHRLNKKKAEIELNQLGKSKEPGYGGSNGPTRYQKIMKRLIKRYIIKAQADRESDEITEG
ELKEIKQDISSLRYELLEEKSQNMETLDGLLRRLGDFNTM
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacaaaccgcggggaggcaatcgcagcagccaatctcctggcaacatggacaga
tccggaacaagaagccaggacaacctgctgctgaatgatgattttagggaggaatactgt
tctgctggacaaaaccttggcaggcacagcagctctgacaggcagctcacagctcgcatc
agcactgtaaaacggcgccaggctctacgaggtcctgcctatatgttctcagctcctttg
atcagcctttcagatgtcgagcaacgtttcctagaggcagctgagtacggcaacatccca
gaggtgcgtcgcatgctgcttcagatccccaacctgaatgtcaatgctgtggattacatg
ggacaaaacgctctgcagctggctgtggccaatgaacatctggaggtgacggagctgctg
ctggggagggcagacttagccagagtgggagacgctctccttttggccatcagtaagggt
tatgttcgtatcacagaggccctgctcagtcacccttctttcagagatgctaaccgtctg
acagcaagtcctgctcaagtagacatgttggatgacttctatgcttatgatgaagatggg
acaaggttttctcatgatgtgactccagtgattcttgcagctcactgccaggaatatgag
atagtttacacgctcctgagcaaaggggcccgcatcgatcctcctcatgactacttctgt
ggctgcgactcgtgtaactatcagcagcagtatgattccttcagccactcacgctccagg
atcaatgcatacagaggactggccagtcctgcgtacctctctctctctaacgaggatccg
gtgctggcagcattggagctcagcaatgagctggccatgctagctgatatagagaaagaa
tttaagaatgattacagtcgcctgtctaaccagtgtaaagattacgtggtgggccttctg
gacctctgtcggagcacagaggaagtggaggccatcctgaatggagaaacagcttctgat
gaaagctttgatatacctggtcgcccctcactgacccggctcaaattagcaatcaaatat
gaactcaaaaagtttgttgcccatccaaactgccagcagcagctgctgagcatttggtac
gagaacattcctgggctgagacaacaaactactgcgattaagctgctggtggttcttgct
gtggctataggactgcctggactggctgtggcgtattgggtcactccttgcagcagggtg
ggaaaagttatgcgcagcccctttatgaagtttgttgcccacgcctcatcctttacaatt
ttcctgggtctgctcatcctgaatgctgctgaccgttttgcaggaaccaccctgttgcca
aacatgacccaccatcagcaatctggaagttcacagctaaagctggaccccccagtactt
caccgcacaaccaccaccccctttacatggatggagatcctaatcatttcatgggtcatt
ggcatgatttgggctgaagtgaaggaaatctggagccagggacccggagagtacctggtt
gaaccatggaacttcttggactttgggatgttggccatttttctggcgtccttcagctgc
cgtttctctgctaagaagcaagctgactgggcccaggcctatgtgtacaaacataacaaa
acactggaccaactgagccgagagaaatgttacttcattctggcacgtatcgactggctg
ccctcagatcctcaactggtgtcagagggcctctatgccatcgctgtggtgctgagcttc
tctcggattgcttacatcctgccagccaacgagagctttggtccactccagatctctttg
ggaaggactgtcaaagacatcttcaagttcatggtcatcttcctgctagtcttcttggcg
ttcatgatcggcatgttcaacctgtactcttactacctgggagcgaagcagaatgacgcc
ttcactaccctggaggagagcttcaagactttgttctgggctatatttggactatcagag
gtcaagtctgtagtgattaacaatggacacaaattcatagagaacattggttacgttctg
tacggggtttacaacgttaccatggtaatagtgctgctcaacatgctcatcgctatgatt
aacagctccttccaggagattgaggacgatgctgatgttgaatggaagtttgctcgggca
aaactttggttttcctacttcgaggagggaaggacactccctgttcccttcaatctggtc
cccagtcccaaatctatgctgggattggtcacagccataaagtccatgctcttatatgtg
gttcacagactcaataagaagaaagctgagatagagcttaatcaactgggaaagagcaaa
gaaccaggatatgggggatctaatggtccaacaagatatcagaagatcatgaagcgtcta
atcaagcgttatataattaaagctcaagcagacagagaaagcgatgagatcacagaaggt
gagctgaaggagattaaacaggatatttcaagtctgcgatatgagctgctggaggagaaa
tcccagaacatggagacactggatggtcttttgaggaggctgggagattttaatacaatg
tga
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