Cyprinodon tularosa (White Sands pupfish): 119776841
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Entry
119776841 CDS
T07496
Symbol
lrrc56
Name
(RefSeq) leucine-rich repeat-containing protein 56 isoform X1
KO
K25425
leucine-rich repeat-containing protein 56
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ctul03037
]
119776841 (lrrc56)
04812 Cytoskeleton proteins [BR:
ctul04812
]
119776841 (lrrc56)
Cilium and associated proteins [BR:
ctul03037
]
Motile cilia and associated proteins
Dynein assembly factors
119776841 (lrrc56)
Cytoskeleton proteins [BR:
ctul04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Dynein-related proteins
119776841 (lrrc56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
LRR_9
LRR_8
LRR_LRWD1
LRR_14
LRR_At5g56370
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
119776841
NCBI-ProteinID:
XP_038131402
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MSVSHESVGQGVRPGPARVRVTELSGSESINPTPTPKPNIDLSNALEAYLSPERLEQLCG
TSDLSCVKYLELCVNTQENTLGDIGVYLPRLEMLKMNNSLITSLRDLGTTLSHLQVLWMT
RCCLQDLSGIFTFSSLKELYLAFNNVSDLSQVAMMENLQLLDLEGNRVDDLIQIHYLGLC
PNLRSLSLEGNPVCVRPNPTSLQVEEYNYRAAVRELVPQLRYLDDVKLEEDRVTCCSTTG
EHWEILRISMQDSKFFESPGAKPVSSASTRTMSATRHTVLSPFGSRPGSSDSDLPSVEAD
TSTLTHGTGNILFCGNPVRAVRARRQKLKTAPTRSSLTPCGPPIHVPEHTYDLEEPSSED
RVNVFAELRAWKEQYSKRLDIIEKERSPQILTIHHSGKEETDIEGEEEEEEGFGCMKSRF
SDEEQEEDDVCASLDTGSPDSSFQSLSPDIHQQETFFPNIARQSLCPDIPFSPSPPLHAA
PAPANMRLPGIRARRLCLSQSKPQHFDPKSLAPLTASAAVEIDLLSERRQHLPGTSYLPL
PPRSSPLKGPVKSCADTDMSGLRLTHKQKKSKDPEGPKMSRPHTAEAALQKHYLHHLLQP
YRGSSHLD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgagccatgaatctgtgggccagggggtccggcctggtccagcgcgggttcgg
gtgactgagcttagcggttcagagagtatcaatcctactccaacccccaaaccaaacata
gacctcagcaatgcactggaagcttacctttcaccagaaagattggaacagttgtgcgga
actagtgacctctcttgtgtgaaatatctggaactctgcgtaaacacccaagaaaatacg
ctgggggacattggtgtttacttgcccagattagagatgctgaaaatgaacaacagtttg
atcacatcactgagagacctgggaaccaccctgtcccacctgcaggtgctatggatgacc
cgctgctgccttcaggacttaagtggcattttcactttttcttctcttaaggagctctat
cttgcctttaacaatgtgtccgacctaagccaggttgccatgatggagaacctgcagctg
ttagatttggaagggaaccgtgtggacgacctcatccagattcattatctgggtttgtgt
cccaatctccgttctctctcgctggaggggaaccctgtgtgtgtacgccctaaccctact
tcccttcaggttgaagagtataattacagagcagcagtgagggagttggtccctcagttg
cgttaccttgatgatgtgaagttggaggaggacagggtgacctgctgtagcaccacaggg
gaacactgggaaattctcagaatttctatgcaagattccaagttctttgaatctcctggt
gctaaacctgtttcatctgcaagcaccagaaccatgtcggcgaccagacatacagttctt
tccccttttggatcaagaccaggctcttcagactctgacctaccatcagtggaagcagat
accagcacccttacccatggaacaggcaacattctgttttgtggaaatcctgtgcgggct
gttcgtgcaaggagacaaaagcttaagacagcaccaaccaggtcatctctgaccccttgt
ggcccccccatccatgtcccagaacacacgtatgacctagaggagcccagttctgaagac
cgtgttaatgtgtttgcagagctgagggcctggaaggaacagtacagcaaacgtctagac
attatagagaaagagcgatcaccacagatccttactattcaccattctggtaaagaagag
acagatatagagggagaggaagaagaggaggaaggatttggttgtatgaagagcaggttt
agtgatgaagaacaagaggaagatgacgtttgtgctagtttagatactggctcaccggac
tcttcatttcagtctctttccccagacatacatcaacaagaaacctttttccccaatata
gctcgacagtccctgtgtccagacatccctttttctccgtctccacctcttcatgccgct
ccagctcctgctaacatgaggttgccagggattcgtgcacgcagactttgtctttctcag
tccaagccacaacattttgatccaaaaagtttggccccactaacagcgtcagctgcagta
gaaatagacctcctatctgagagacggcagcacttgccagggacctcatacttacccctt
ccaccaagaagttccccgcttaaaggaccagtgaagtcctgtgcggatacggacatgagt
ggtctacgtttgacccacaagcaaaagaagtccaaggacccagagggccccaaaatgtcc
cgccctcacactgctgaagcagccctgcaaaaacattacttgcaccatctactccaaccc
tacagagggagctcacacctagactga
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