Cyprinodon tularosa (White Sands pupfish): 119776979
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Entry
119776979 CDS
T07496
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctul04515
]
119776979
Cell adhesion molecules [BR:
ctul04515
]
Cadherins
Protocadherins
119776979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
119776979
NCBI-ProteinID:
XP_038131629
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MTKRNAYRDWRWLVLWWHHFFIMWNTIDGQTRYSIQEELKMGSVVGNLAKDLGLSLTEIS
DRKLSVASEAGKQYFTVDAGKGELVVNDRIDREALCGQSASCVLPLQVFIEDPLQLFRVE
VEIQDINDNSPRFPSKDITLDIAESTAIGVQFPLESAIDPDVGSNSLRSYKLSKHECFSI
RVKDVAGGRKVPELFLTKMLDREKNIAHTLLLTALDGGNPVRSGTAEITITVLDINDNIP
AFEKSLYKVSIPENAPEGELIIQTKAADIDEGQNGEIEYSFGSHTPDSVLSIFTIDSASG
TIILKGNLDYETTTKYELDVTAKDRGTPRMEGHCMVNVEVLDVNDNAPEIILTSRPKPVS
ENSPNGTVVALISARDLDSGDNGKVKLHIPEKSNFALRPSFSQNYALVTNSVLDREKVPE
YNIEIAAIDSGSPPLSSKKTIHVSITDVNDNPPIFTQSSYNVYLKENKIPGSILYSVSAS
DRDSGENAKISYSILDSKVLGVSVSSYVYINSDNGSIYSMQSFDYEKLKVFQIQVQAKDH
GSPPLSSNTTVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVDAD
SGHNAWISYRLAEATDASLFTVNQYTGEVRTKRAVTEQDDSSQRLLIEIKDDGEPVQSAT
ATVSILLEDGLHEPILDLRHKVSEPSKKTGRITLYLILSLASVSVLSLVTFLILAVKCIR
SSSSSGSCCMRRSDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFRSCMSPMS
EYSDFTLIKPSSTTDFKETLSVLDASLPDSTWTFESQQVRQNYCIFP
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaaatgcatatcgagactggagatggctggtgctttggtggcaccatttt
tttatcatgtggaatacaatagatggacagactcggtacagcatccaagaggagttaaaa
atgggatctgtggttggaaatctcgctaaagatttagggttgtccttaactgaaatttct
gaccgtaaactaagcgtcgcatctgaggctggtaagcagtattttaccgtggatgcgggg
aagggagagctggttgtgaatgacagaatagatagagaggctctttgtggacaaagcgcc
agctgtgtgttgcctctgcaggtctttatcgaagatccgttgcagctttttcgtgtggaa
gttgaaattcaagatattaatgataattcccccagattcccgtcaaaggatattactcta
gatattgcagaatctactgcgattggggttcagtttccattagaaagtgcaatagatccc
gatgtcggtagtaattctctgaggtcatataaattgagtaaacatgaatgtttcagtata
agagtaaaagatgttgctggtggaaggaaggttcctgaattattcctaacaaaaatgtta
gacagagagaaaaatattgcacatacgcttctgttaacagctctagacggaggtaaccca
gtgagatcagggacggcagagataactattacagttctagatataaatgataatatccca
gcgttcgagaaatctttatataaagtatcaattccagaaaatgctcccgagggtgaattg
attatacaaacaaaagcagcagatatagatgagggtcaaaacggagagattgaatattca
ttcggatcgcacacccccgattctgttctttccatttttaccattgattctgcttcagga
acaatcattctgaagggaaacttagattatgaaacaactacaaaatatgaattggatgta
actgcgaaagataggggcactccgagaatggagggacattgtatggtaaatgttgaagtt
ttagatgttaatgacaatgcgccagaaataattctcacgtctcgaccaaaacctgtgagt
gaaaactcgcctaacggtaccgttgttgctctaatcagcgccagggacttggattccggg
gataacggaaaagtaaaattacacattccagagaaaagtaactttgcgctgaggccctcg
ttttcacaaaactacgcgctagttacaaacagtgttttggatcgcgaaaaagtccccgaa
tataacattgaaatagcagccattgattctggctcccctccgctgtcaagtaagaaaact
attcatgttagcataactgatgtaaatgacaaccctcctatttttactcagtcttcctat
aatgtatatttaaaagagaataaaattccaggatctatactttactcggtatcagcgtct
gatcgggattctggggaaaacgcaaagatttcttactctatacttgactccaaagtgctg
ggtgtttctgtctcctcttacgtttacataaactcggataacgggagcatctacagcatg
cagtcatttgattatgagaagctgaaggtgtttcagattcaggttcaggcaaaggaccat
ggttcccctcctctgagcagcaacaccactgtccatgtttttatcctggaccagaacgat
aatgctcccgctgttatttacccctcctctgctgccctgggttctctctctcatcaaagg
atgccccgctctgctaaagctggtcacctggttactaaggtgacggccgtggacgctgac
tccggccataatgcctggatctcctacagactggcggaggccacagacgcctctctgttc
accgtcaatcagtacacaggggaggtgaggactaaacgcgctgtaaccgagcaggatgac
tcctctcagaggctgctgatagagatcaaggatgatggggaaccggttcagtccgccacc
gctacggtgtccatcctgctggaggacggtctccatgaacccatcttagacctcagacac
aaagtttctgagcccagcaagaaaactggcagaattaccctttatttgattctgtctctg
gcctcagtgtccgtgctgtctctggtgacgtttctcatcttagcggtgaaatgcatcagg
agcagcagtagcagcgggagctgctgcatgagacgaagcgactgtgatgattacaagaac
cccaacagaaacctgcagattcagctcaacactgatggacccataaagtacgtggaggtc
ctgggaggagacatgatgtctcagagtcagtccttcaggtcctgcatgtctccaatgtca
gagtacagtgattttactctgatcaaacccagcagcaccacagactttaaagaaaccctc
agtgttctggatgcgtctttacctgacagcacctggacctttgagagccagcaggtgagg
caaaactactgtatttttccatga
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