Cyprinodon tularosa (White Sands pupfish): 119776980
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Entry
119776980 CDS
T07496
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctul04515
]
119776980
Cell adhesion molecules [BR:
ctul04515
]
Cadherins
Protocadherins
119776980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
FlgK_2nd
Motif
Other DBs
NCBI-GeneID:
119776980
NCBI-ProteinID:
XP_038131630
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MEYSGRGIMWSKLPTWQALLWWNYFYLMWSTIDAQTHYSIPEELKQGSVVGNIAKDLGLH
VPEMYRRKLRITSEAGKQYFDVDLGKGELLVTDRIDREELCGQRPSCVLPLELVIDNPLQ
VHRVEIEIRDTNDNTPSFLTKEKVVKIAELVNPGARFPLESANDPDVGTNSVRTYLISKN
EHFKLTVKNLKDGRKIPELVLDKPLDREMQTVHNLILTAVDGGDPVRSGTSEITVIVLDI
NDNAPQFERQVYEVNVTEGATFGTEILQVKAVDADEGLNGEIEYVFAEQTSDLIVSLFDI
NPSTGTITVKGVLDYESNSLHRFDITAKDKGNPEMDGHCGVEVKIIDINDNNPEIVVTSL
TTPVPEDSAAGTVIAIISTRDPDSGVNGKVTLTVSAKSPFKLNPSISKHYSLVTNGPLDR
EKNSMYSVKITATDGGKPPLTSEKTIAFELSDVNDNPPRFSHVSYAVYIKENNIPGLILS
SVSASDQDSGENAKISYSILDSKAQDVSVSSYVYINSENGSIYSMQSFDYEKLKVFQIQV
QAKDHGSPPLSSNTTVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVT
AVDADSGHNAWISYRLAEATDASLFTVNQYTGEVRTKRAVTEQDDSSQRLLIEIKDDGEP
VQSATATVSILLEDGLHEPILDLRHKVSEPSKKTGRITLYLILSLASVSVLSLVTFLILA
VKCIRSSSSSGSCCMRRSDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFRSC
MSPMSEYSDFTLIKPSSTTDFKETLSVLDASLPDSTWTFESQQVS
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggagtattcgggacgtggaataatgtggagcaaattgccgacatggcaggcgcttttg
tggtggaattatttctatcttatgtggagtacaatagacgcacagactcattacagcatc
ccggaggagctcaaacagggatccgttgtaggaaatatagcaaaagatttgggtttacat
gtgcctgagatgtatcgccgaaaattacggattacctccgaggctggtaagcagtatttt
gatgtagatttggggaaaggagagctgcttgtgacagacagaatagatagagaggaactc
tgtggacaaagaccatcctgtgtgttgcctttagagctagtaatagataacccgttacag
gtgcacagggttgaaattgaaatacgggatacaaatgataatactcctagctttcttact
aaagagaaagtagttaaaatagcggagttggtaaatccaggcgcgcgatttcctttagag
agtgcaaacgatccggatgttggcactaattctgtacgcacatatctcataagcaaaaat
gagcatttcaaattaacagttaaaaatcttaaagatggtagaaaaattcctgaattggtg
cttgacaaacctcttgatcgagagatgcagactgtacacaacctcatcctcacagctgtg
gatggaggagatccggtgcgttcagggacatcagaaatcactgttatagtgcttgacatt
aatgataatgcgccacaatttgaaaggcaagtatatgaagttaatgtcactgaaggtgct
acatttggaaccgagattttgcaggtaaaagctgtagatgcagatgagggattaaatggg
gaaattgaatatgtatttgcagagcaaacttcagatctcattgtatcattatttgacatt
aatccatctactggaactattactgtaaaaggggttttagactatgagtcaaactcttta
catagattcgatattacagcaaaagacaaagggaatcctgagatggacgggcattgtggt
gtggaagtcaaaataattgacattaatgataataatccagaaatagttgtgacttcttta
acaacacccgttcctgaagattctgcagctggaacagttattgcaataataagtacaaga
gaccctgattcaggcgttaatggcaaggttacattaacagtgtcagcaaagtctccgttt
aagttaaatccgtcgatctctaaacattattctttggtaacaaatggtccgctcgatcgt
gaaaaaaacagcatgtacagcgttaagataaccgcaactgatggcggtaaaccgccttta
acgagtgaaaaaacaatagcttttgaactttcagatgtaaatgacaacccacctcgtttc
tcccatgtttcatatgcagtttacataaaagaaaataatatcccaggtcttattttgagt
tcagtatcagcttctgatcaagattctggtgaaaacgcaaaaatctcttattctattcta
gactctaaagcacaggatgtgtctgtctcatcttatgtttacattaattcagaaaacggg
agcatctacagcatgcaatcctttgactatgagaagctgaaggtgtttcagattcaggtt
caggcaaaggaccatggttcccctcctctgagcagcaacaccactgtccatgtttttatc
ctggaccagaacgataatgctcccgctgttatttacccctcctctgctgccctgggttct
ctctctcatcaaaggatgccccgctctgctaaagctggtcacctggttactaaggtgacg
gccgtggacgctgactccggccataatgcgtggatctcctacagactggcggaggccaca
gacgcctctctgttcaccgtcaatcagtacacaggggaggtgaggactaaacgcgctgta
accgagcaggatgactcctctcagaggctgctgatagagatcaaggatgatggggaaccg
gttcagtccgccaccgctacggtgtccatcctgctggaggacggtctccatgaacccatc
ttagacctcagacataaagtatctgagcccagcaagaaaactggcagaattaccctttat
ttgattctgtctctggcctcagtgtccgtgctgtctctggtgacgtttctcatcttagcg
gtgaaatgcatcaggagcagcagtagcagcgggagctgctgcatgagaagaagtgactgt
gatgattacaagaaccccaacagaaacctgcagattcagctcaacactgatggacccata
aagtatgtggaggtcctgggaggagacatgatgtctcagagtcagtccttcaggtcctgc
atgtctccaatgtcagagtacagtgattttactctaatcaaacccagcagcaccacagac
tttaaagaaaccctcagtgttctggatgcgtctttacctgacagcacctggacctttgag
agccagcaggtgagctaa
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