Cyprinodon tularosa (White Sands pupfish): 119776981
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Entry
119776981 CDS
T07496
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctul04515
]
119776981
Cell adhesion molecules [BR:
ctul04515
]
Cadherins
Protocadherins
119776981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
119776981
NCBI-ProteinID:
XP_038131631
LinkDB
All DBs
Position
Unknown
AA seq
824 aa
AA seq
DB search
MAKTMGYRDWRWKAVWWNQLFLLWITVEAQTRYSIPEELRRASVVGNLAKDLSLSLSDIL
SRKLRVASEAGEQYFSVDAGKGELVVNDRIDRDAICGQSASCVLTLQIVIDNPLQLYRVE
VEIQDVNDNSPSFPSTEKILQIAELAAAGTHFPLDSAQDLDVGVNAVRSYSLSKDDFFTL
KIKDVSGGKRVPELVLSKSVDREMKAKHKLILTAIDGGNPARSGTCQLTINILDINDNFP
AFEKNIYKVSINENAANGTSVLTLKAKDADEGLNGEIEFSFAAHTPENVLSVFHIDSLTG
EIRLIGDLDFETHSNYEIYVTAADKGSPKMEGHCTVHIEVLDVNDNPPNIFLTSQPNSVP
ENAPSGTVVALISARDVDSGDNGKVTLQLPKDMPFKLKPSFSDNYVLITHGALDREQFTE
YNVEITATDKGSPPMSSKKTVNVNITDVNDNPPVFTQSTCAVYLKENRLPGSILYSLSAS
DSDSGDNAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDH
GSPPLSSNTTVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVDAD
SGHNAWISYRLAEATDASLFTVNQYTGEVRTKRAVTEQDDSSQRLLIEIKDDGEPVQSAT
ATVSILLEDGLHEPILDLRHKVSEPSKKTGRITLYLILSLASVSVLSLVTFLILAVKCIR
SSRSCCTRRGDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFRSCMSPMSEYS
DFTLIKPSSTTDFKETLSVLDASLPDSTWTFESQQVRQKVIRFL
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagacaatgggataccgcgactggagatggaaagcggtttggtggaatcaatta
tttctcctgtggattacagttgaagcacagactcgttacagcatcccagaggaactaaga
agagcttccgtggttggaaatctagctaaagatttgagtttgtctttgtctgacattttg
agccgtaaactgcgggtcgcatctgaggctggcgagcagtatttcagcgtggatgcggga
aagggagagctggtggtgaatgacagaatagacagagatgctatttgtggacaaagcgcg
agctgtgttttaactcttcaaattgtgattgataatcctttacagctttacagagtagag
gttgaaatacaagacgttaatgataattcccctagttttccgtcgactgaaaaaatattg
caaatagcagagctagcagcggcagggacgcattttcctctggattcggctcaggatctt
gatgttggtgttaacgcagtaagatcgtattccttaagcaaagatgatttttttactttg
aaaatcaaagatgtgtctggcggaaagagagttcctgagttagttttatctaaatccgtt
gacagagagatgaaagcaaaacataagctgatattaactgcaatagatggagggaaccca
gccaggtctgggacctgccaattaaccataaatatccttgatattaacgacaatttccca
gcttttgagaagaacatatacaaagtttctataaacgaaaatgcagcaaatgggacatca
gttcttacactgaaagctaaagatgcagatgaaggtttaaacggagagattgagttttcc
tttgcagcgcacacgccagaaaatgtcctgtctgtgtttcatatagattcactaactgga
gaaatacgtttgattggggacttagattttgaaacacattctaattacgagatctatgtt
accgctgcagacaaaggaagcccaaaaatggaggggcattgtactgttcatatcgaagtt
ttagatgttaacgataatcctccgaatatatttctgacttctcagccaaactcagtaccc
gagaatgcgccaagtggcactgtagtggctttaattagcgcaagagacgttgactctggt
gataacggtaaagttacattgcaacttcccaaagatatgccttttaaactgaaaccatca
ttttctgacaattatgttttgattacacacggtgctttagacagagaacaattcactgag
tataatgttgagataactgccactgataaaggttcaccgccaatgtcgagtaaaaagaca
gttaatgttaatatcactgatgttaatgacaatccacctgtatttacacaatccacatgt
gctgtttatttaaaagaaaatagattaccaggatctatactttactcgttatcagcatcc
gattctgattctggtgataacgcaaagatatcttactcaatactggattctaaagtacaa
gacgtttctgtctcatcttatgtttacattaactcggataatgggagcatctacagcatg
cattcctttgactatgagaagctgaaggtgtttcagattcaggttcaggcaaaggaccat
ggttcccctcctctgagcagcaacaccactgtccatgtttttatcctggaccagaacgat
aatgctcctgctgttatttacccctcctctgctgccctgggttctctctctcatcaaagg
atgccccgctctgctaaagctggtcacctggttactaaggtgacggccgtggacgctgac
tccggccataatgcctggatctcctacagactagcggaggccacagacgcctctctgttc
accgtcaatcagtacacaggggaggtgaggactaaacgcgctgtaaccgagcaggatgac
tcctctcagaggctgctgatagagatcaaggatgatggggaaccggttcagtccgccacc
gctacggtgtccatcctgctggaggacggtctccatgaacccatcttagacctcagacac
aaagtttctgagcccagcaagaaaactggcagaattaccctttatttgattctgtctctg
gcctcagtgtccgtgctgtctctggtgacgtttctcatcttagcggtgaaatgcatcagg
agcagcagaagctgttgcacgagacggggtgactgtgatgattacaagaaccccaacaga
aacctgcagattcagctcaatactgatggacccataaagtacgtggaggtcctgggagga
gacatgatgtctcagagtcagtccttcaggtcctgcatgtctccaatgtcagagtacagt
gactttactctgatcaaacccagcagcaccacagactttaaagaaaccctcagtgttctg
gatgcgtccttacctgacagcacctggacctttgagagccagcaggtgaggcaaaaagtc
attcggtttttataa
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