KEGG   Cyprinodon tularosa (White Sands pupfish): 119777697
Entry
119777697         CDS       T07496                                 
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like
  KO
K06752  MHC class II antigen
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04145  Phagosome
ctul04514  Cell adhesion molecules
ctul04672  Intestinal immune network for IgA production
ctul05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    119777697
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    119777697
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    119777697
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119777697
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ctul04147]
    119777697
Exosome [BR:ctul04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119777697
  Exosomal proteins of epithelial cells
   119777697
  Exosomal proteins of breast milk
   119777697
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 DUF2273 DUF2627 DUF4064 Ig_3
Other DBs
NCBI-GeneID: 119777697
NCBI-ProteinID: XP_038132617
LinkDB
Position
Unknown
AA seq 288 aa
MNTQSFLFIFFLSLENPVFSHEDFYQVRAYCAFNGPNFNNIEYTIMTSFNKQNMMQYNST
RGNWIGFTQYSHVNSYYWNKDPADALQRVLQKKLMCYDNLHHIRTMGNLSTTPTIRIKFL
IKPDGRHPALLICSAYNFYPKQIQLTWLRNNQQVTKGVTYSDVIPVGDLYYHFHSHLEYI
PTPGEKISCMVEHLTMSEPRVVVWDDSLPKKEKTKIVVGLIGLILGLVILISGFIYHKQK
SAVYNSICQGRAGSGGLVTRAECFNSEDAESTKCEPHRLLLLVPGHHP
NT seq 867 nt   +upstreamnt  +downstreamnt
atgaacactcaaagttttctgttcattttctttttatcgcttgaaaatccagttttctca
cacgaagatttttaccaggtcagagcatactgtgcgtttaatggtcctaactttaacaat
attgagtacacaattatgactagcttcaacaagcagaatatgatgcagtacaacagtaca
aggggaaactggattggatttacacaatattcacatgttaattcatattactggaataag
gatcctgctgatgcgcttcaaagagtactgcaaaagaagcttatgtgttatgacaaccta
caccatatccgaacaatgggaaacctgtcaacaacacccaccattaggatcaaatttctt
ataaagcctgatggtcgacatccagccttgcttatctgcagtgcttataacttttacccg
aagcaaatccaactaacctggctaagaaataatcaacaagtgactaaaggggtcacttac
tcagatgtgattcctgttggagacttgtactaccactttcattctcacctggagtacatt
ccaactcctggagaaaaaatcagctgcatggttgaacatttgacaatgtctgaaccaagg
gttgtagtttgggatgactcccttccaaagaaagaaaaaactaagattgttgttggtctg
attggactgatacttggtttggttatcctaatatctggatttatttaccacaaacaaaag
tctgctgtgtacaactcgatctgccaaggacgtgcagggagtggtggcctagtgactaga
gcagagtgctttaattctgaggatgccgaaagtaccaagtgtgaaccccatagattgctg
ttattggtccctgggcatcacccttag

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