Cyprinodon tularosa (White Sands pupfish): 119778993
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Entry
119778993 CDS
T07496
Symbol
pkp1b
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctul04812
]
119778993 (pkp1b)
Cytoskeleton proteins [BR:
ctul04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
119778993 (pkp1b)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Arm_2
Atx10homo_assoc
Symplekin_C
Motif
Other DBs
NCBI-GeneID:
119778993
NCBI-ProteinID:
XP_038134399
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MSKMSKADPLKSAISIENVDDTSLALPSGNQYRSGEQRVKAQVQTVRRIKSRHSSNSSRS
GSTSMSPTSPVYDSVFTDGVKTPSLTSNGSAFYSNGFSKSFTIDKNISNHQSITNLGSTV
RKKSLTSGYRFERTQPAAGSTVALGHANTSRSEPGVAWGRYGTQLSVPHTRNPTTEQQAS
RNNYRNQRSTSNHFVQRTISQSQPLYPANGFGLTHKQSQYKGSQPNMSKTPTQQTTTDSS
SKTKINSGSNGNILNADITMKEAVQFLTSDDENYQNCGASYIQHNTFISDKAKEEVLKLK
GIHPLVGLLHSHNSQVKHTASAALRNLSFKSDKNKEEIHRCDGITEVANQLRDSESVDLD
KQLTGLLWNLSSADNLKPDLLKHALPVLMEHVILPYTTRSGDTIRDSDVFLHTTGCLRNL
SSAKESSRQTMRKCRGLIDSLTAYIKDCLEKEKTNDECLENCVGILHNLTFQLEDEAPML
FTNINTLARSQLRSTSPNNSNPVGCFSSQTKLPQVERPFDFAVIEDPQPKGPSLLIHSKT
LQDYLSLLSLSTGEELQEACCGTLHNLTAREGIVSSVISQMIVQKLNGMPVIAPLINSKK
VNLQKTTLALVGNLIKNPNLHQAVGRKALPELLSLLAEGTSGANESDDNLAMACNATSCL
VLKDPDMTKRYLSNDFIKSLSSISHNMYFPKSSKAAAVLLVKIWSDKELQSFFKKQGLTK
SFFVNDTTMAAHRSLHIVD
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaatgtcgaaggccgatccgctgaaatcggcgatctccattgagaatgtggac
gacacgtcgctggctctgccgtcagggaatcagtacagatccggagagcagcgcgtaaag
gcgcaagtgcaaactgtcaggaggataaagtcgaggcactcgagcaacagcagcaggagc
ggatctacttctatgagcccaacaagccctgtgtatgactctgtgtttacagatggggta
aagacaccgtccctcacatctaatggaagcgccttctacagcaatggtttctcaaaaagt
ttcaccatagacaaaaacataagcaatcatcaatcaatcaccaacctaggatctactgtg
aggaaaaagagtctgacatcagggtatcgctttgagagaactcaacccgctgctggcagt
actgtggctctgggtcatgctaacaccagccgcagtgaacccggtgtggcctggggcaga
tatggcacccagctgtctgtcccacacaccagaaaccccaccacagaacagcaggccagc
aggaacaactacaggaatcagcgtagcaccagcaatcactttgtgcagaggaccatctcc
cagtcccaacctctgtaccctgcaaacggctttggtctgactcacaaacaaagtcagtat
aaaggcagccagcctaacatgagcaagactcccacacagcaaaccactactgactcttca
tccaagactaaaataaactctggatcaaatggaaacattttaaatgctgacatcactatg
aaggaggctgtgcagtttcttaccagcgatgatgaaaattatcaaaactgtggcgcttcc
tatattcagcacaatactttcattagcgacaaagcaaaagaagaggtcttaaagcttaag
gggatccaccctcttgtaggtttgctgcacagccacaactcacaggtcaaacacacggcc
tctgctgctctgcgaaatctgtcctttaaaagcgacaaaaacaaagaggagatccatcgc
tgtgacggcatcactgaggttgccaatcagctcagagattcagagtctgtagatctggat
aagcagctgacaggtctgttgtggaatttgtcttctgccgacaacctgaagcctgatctg
ctgaagcatgctctgcctgtcttaatggagcatgtgatcttgccttatacgacaaggtcc
ggagatacaatcagggattcagatgtcttcttacacaccacgggatgtcttcgaaacctc
agcagtgccaaggagagcagcaggcagacgatgaggaaatgtcgaggtttgattgactct
ttaaccgcttacatcaaagactgtctagagaaggaaaaaaccaatgatgagtgtttggaa
aactgtgtgggcatcctgcacaatctgaccttccaactggaggacgaggctccgatgctg
ttcaccaatataaatacgttggctaggagtcagctcaggagcaccagtccaaataacagc
aaccctgttggctgcttcagttcacaaaccaaacttccacaggtggagcgtccctttgat
tttgcagtcattgaggatccgcagcctaaaggaccatcccttttgatccactctaaaacg
ctgcaggattacctttcactgcttagcttgagcacgggagaagagcttcaggaagcctgt
tgcgggacactgcacaatctcactgcacgtgaaggcattgtctccagtgtaataagccag
atgattgtgcagaaactgaatggcatgccggttattgcgcccctcataaactcaaagaaa
gtcaacctgcagaagaccacactggctttggttgggaatttgatcaagaacccaaacctg
catcaagcagttggccgtaaagctctcccagagttgctgagtctccttgcagaaggcacg
tctggagcaaacgagtctgatgacaaccttgctatggcttgcaatgccaccagttgcctc
gttctgaaagaccctgacatgaccaagagatatttaagcaatgacttcataaaatccctc
agcagcatcagccacaacatgtattttcccaaatcaagcaaggctgctgcagttcttctt
gtcaaaatctggtcagataaagagcttcaaagctttttcaaaaagcaagggttgaccaag
tctttttttgtgaatgacaccaccatggcagctcacaggtcgctccatattgtggattag
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