Cyprinodon tularosa (White Sands pupfish): 119780036
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Entry
119780036 CDS
T07496
Symbol
si:ch1073-335m2.2
Name
(RefSeq) LOW QUALITY PROTEIN: msx2-interacting protein
KO
K25100
Msx2-interacting protein
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119780036 (si:ch1073-335m2.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctul03036
]
119780036 (si:ch1073-335m2.2)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
119780036 (si:ch1073-335m2.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_PARP14_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
119780036
NCBI-ProteinID:
XP_038135846
LinkDB
All DBs
Position
Unknown
AA seq
3160 aa
AA seq
DB search
MVRETRHLWVGNLPEHVREEKIVEHFKRYGRVESVKVLRKRGSEGGVAAFVDFVDIKSAQ
KAHNAVNKMGDRDLRTDYNEPGSVPSAVRGLEDSSPSSSREVAGFSRGTVGPVFGPPVSL
HTREGRYERRIDGSSESRERAYDHSPYGHHERSGTFDRRHYNAEYYRDRAVFAAAGPGSS
AIGGSFEAADPHFESRIRDPFTLTSSTRRDLYRDDRGRRVDRAYHHRRSRSSHSSQSRHP
SPQRAAGQTPKTPHSPKRTPLSPGRGPRSRSHSRSSSSDSVSSTSSTGSGSDSNSSSSDG
SQARSVQSSAAHASQTCMVMDSEEPRRSFGIKVQNLPVRSTDTSLKDGLFHEFKKYGKVN
SVQIHGASEDRYGLVFFRQQEDQEKALSVSKGKLFFGMLIEVTAWNGPETENENDYRPLD
GRLDEFHPKATRTLFIGNLEKTTTYQQLLDIFQRFGEIVDIDIKKVNGIPQYAFVQYSDI
GSVCKAIKKMDAEYLGSNRLKLGFGKSIPTTCVWLDGLAPNITEQYLTRHFMRYGHVVKV
VFDRLKGMALILYNNTDFAQQAVRETKGWKIGGNKIKVDFASQESQNAFYRSMQASGQDI
RDFYEVPPERREDRRPPYHEFTAERAYYENLRTTDLYPEDARREYAARSRERFPGLEHYQ
GEHFDPRYHEDPRDYRDYRDPFEQDIRKYTYIQRERERERERFEADRSRWSPSHPRRAIT
PTISPSSSERATRDSERRVYSQSSERSGSVSSMSPSHFDKSEKNILDHAAKGEKSSQPDR
VTGVEKPKRPKRKDKTDKEKAERGKSRKPKPQSPANPIPETETDAGLDGGSGRGRGSDQD
VHEKQKCKLEGDNLSGSQLTALQESVKSEMNKSDIAEVDGKTRLKKNPKTDVGNDGKELV
VDTDRLAARKRRFGDLGGKTARQKRSRLEEEDGSQSSDFGSNNSYIKEPDTEKHKDSQRR
DARLKTEKSVTQKDGLEDLRGQRDIPEGSIELLESKRQGSTSSRRVSLEGNSDQGGIREQ
EQNALFKLNQNPENKNTKNKEDHVDIDLSQSYRKQMEQNRRLHLQQQQQRDSDKLKKAEN
LQRNEAEDLEHRSLVHEVGKPPEDVTDNFPSHKLSEQFEAEPGIKRERVYRRQKSEDPDW
SGTPSPGHQVFTHVDEEFMDASLKELSRNNQKIHPELELLVKRTQNTQVTKTNTPMNIVE
DDPQKRWESRVKQEILPNVNFSRNLSKTLQNRKPSDYGLWHDLEPGEVRSDSEEDRENKP
LSPAPSTSMPFPERPRPDRFSDPKLAHLERNKFYSFALDQTITPDTKALLERAKSLSSSR
EDNWSFLDYDSHFVNFRHQKDTEKVESAPRSTPSWYMKKKKRSGSEVKQDNRKEEPKPEE
QERRELFASRFLHSAVFELDSRRLQHLERKYEELELNQQASQQGAEGELETGPVVLFHSR
FLELTQLQQQKNKSQQLQEDKGNTVSTNENKEEKPSDLEQQAPRPNDTPESSVEAEIKPI
SPVEQVIPEQRLTPNLVSQPVIKDSPPLDQKCELLRPATDVCPPVKQEIKEEVKEREDII
PMLHPPTETIKPEPVSETLDETKIAEEKQEFVEETKPLVAEQSHCPGSHEELVSISEPEL
GPETSQPEVPTSSSPNQSHLTEEASVIKEEPYSTCQTALESDGDRKLEVGKEQVSADSDT
VEEPVSFQREKTKELKTKKGKQSPAQVPVTPISASEKQATRKSERIDKDKLKRGSSPRAE
TKSTAKSPIPGSDHDQLKQSLPIRGRTRRNVKSIYATPVEEATPTRGKEITESLRPVRKR
PAEKEAAQHSTELEAPAPTPTKQRGRPPKNRKPVEEVSASKADKIKIDKDMDSNESESTE
GIQRLKGKSPHITKGQMPSAQGSKKGDKADATDEAQERNFTEADTTQQLSSLVKDSSVKS
DVNKSEKDKEGVELGKDKDVHEKICQGKSNGNNTDALVIEERLVPEKEKTTRGKLKSAGA
SKPHVLKDLQIRLNVTEVKDLLQLGDEEFGNQEDLSKKVRPDDLPEQASRCSTANKESPS
EEKEKEDIEASKSSSSQEQELEQAVENIAKLTDPAFPTEPPNPSVPPAEVKSDPEEEKPC
NPASETELMAAIDSITVEESSVPLTPAAPINTDVGSESEINEFVQPLKVEESETGNQEES
VLTNTPKKGWKGRPRTPKRAKAPKYARKDVKEEPSLGEELAVPIAERTASDVKIVSEKPP
PAAAAAVITPTPWKSEPELPAVKATESELTSSVEEQTQAMKPVPPQGQSPIYTKPQHLPA
DCVSPSLTSNRQNIRPIQTCRAPVSPQDWRQQSKDVFGSSANMSVAAKEGQPASDSINKE
HEQRTSDLRQILMKTKPVSLQGSSSAQTNLPSPRDQNPSESNPAITAAIQNRSPLRDSKT
PTQSASVVRTPSTLTSETKSVISVIASTATSVISRVCNPLESEEKPNLNSGNPSIDMHKT
AYRPSKDEGGPYHGPPDEAGARFIVDGPTYNSVSCSGLRVNTSEGVVVLSHSGQKTEGPQ
RISAKISQIPQATAGDIESQQLVSIPQIKQDVYAHSQSGHQKGPSQTDHVHPGKPQSALS
SIKQESSSLEKMEPSYQSGPQGVVKRLPGQGNQQVMGYHPDYMKLKHKKKMDNIDHGTDG
VKPPWTSTISPAISPHLPSPPGNHVGYVTAGDRAQAHLGTIKQEPRSPRKSGPPHPPFNK
VSSPLGSSSPKGIPVMLTSALNPMQQYMAGVHHPEQSVIMPPHNVPGGLGRMSPHCVSQT
RVNTPPLSVMNYVHGEQLPSPWSGSMQPRSSSPQAVSRDKVLKVNHGSLRGHEGEQEESR
HFHQAGRPSATLPSDSRGTLRTNVLETFIAQRDMRVHLHQTGEQRMTLDPHSGHIQETLP
PSVSPRAHILSKGVSEKDLKSLEAKRPHSPLPKDGMMGIRQSGPAVSSPQRVPLMPPGPS
GSFSEYPGMYPNRIHSQIPDTSVGHNQPPLNVTPCMGADLQTKPDGKIAQPVNMVQLLTK
YPIVWQGLLALKNDTAAVQLHFVCGNKALAHRSLPLQEGGALLRIVQRMRLEASQLESVA
RRMTGDSDYCLLLALPCGRDQEDVINQTQNLKAAFINYLQAKLAAGIINIPNPGSNQPAY
VLQIFPPCEFSESHLSQLAPDLLNRISSISPHLMIVITSV
NT seq
9483 nt
NT seq
+upstream
nt +downstream
nt
atggttcgggaaaccagacacctttgggtgggaaatttacccgaacatgttcgtgaggag
aaaatcgtggaacattttaaaaggtatggccgagtggagagcgtcaaggttctgcgaaag
cgagggtcagagggcggtgttgcagcctttgtggattttgtggatatcaaaagtgcacag
aaggctcacaatgctgtcaataagatgggagacagggaccttcggactgactacaatgag
ccagggtcagtccctagtgctgtgcggggcctcgaagacagctccccctccagcagtcga
gaggttgcaggattctctaggggaacagttggcccagtgtttggcccacctgtgtcccta
cacacccgagagggacgttatgaacggagaatagatggtagctcagaaagccgtgaacgt
gcatacgatcacagcccatatggccaccatgagcgcagtgggacatttgacagacgtcac
tacaacgctgaatattaccgtgatcgtgccgtgtttgcagctgctggcccgggcagtagt
gccatcggagggagttttgaagcagcagacccacattttgagtctagaatacgagatcca
tttacccttaccagttcaacaagacgtgacctctacagagatgatagagggcgacgtgtt
gatcgagcttatcaccaccgtcgaagcagatcatctcattcctcccagtcaaggcaccca
tctcctcaacgggctgcagggcaaaccccaaaaactccccattctcctaaaagaacgcct
ttgtcccctggaagaggcccaagatcgagatctcacagcagatcatcgagctcggactct
gtcagcagcaccagcagtacaggcagtggcagtgattcaaacagcagctctagcgatggt
tcacaagcccgttctgtccagtcttcggctgcacacgcttctcagacatgtatggtgatg
gattctgaagagccacggaggagttttggaattaaagtgcaaaacttaccagtgcgctcc
acagatacaagtttaaaagatggactctttcatgaattcaagaaatatgggaaagtgaat
tcggtgcagattcatggggcgtcagaagatcgttatggtctagtgttcttcagacaacaa
gaggatcaggagaaagccctcagtgtctccaaaggaaaactcttctttggaatgcttatt
gaggtcacagcctggaacggtcctgaaactgagaacgaaaatgactacaggcctctagat
ggacgtctagacgagttccaccccaaggctacgaggacactgtttataggaaaccttgaa
aagaccaccacttatcagcagctccttgacatttttcagcgcttcggagaaattgttgac
atcgacatcaagaaagtgaatggaattcctcagtatgccttcgtccagtattctgatatt
gggagcgtttgcaaggccatcaagaaaatggatgcagaatatctggggagcaacaggctt
aagctcggttttgggaagagtattcctactacatgtgtttggcttgatggtttggctcct
aacattacagagcagtaccttacaagacattttatgcgctatgggcatgtagttaaagtc
gtatttgatcggctaaaggggatggcccttatcttgtacaacaacacagattttgctcag
caagctgtgagggagaccaaaggctggaagattggtggcaataaaattaaggtggacttt
gcaagtcaagaaagccagaatgcattttaccgctcaatgcaggcctctggtcaagacatt
agagacttctatgaagttccaccggaacgacgagaggatcgcagacctccttatcacgag
tttacggcagagagagcttactacgagaacttaagaaccactgacctttatccagaagat
gctcgtagagaatatgctgcgcgcagcagagagcgctttcccggactggaacattatcag
ggggaacactttgatccacgctatcatgaagacccaagagactacagggactatagagac
cctttcgagcaagacatcagaaaatacacctatattcaaagagagcgagaaagagagcgg
gagcgtttcgaggctgatcgtagcaggtggagcccatctcatccaaggcgagctattact
cccacaatatccccctcttcatcagaacgggctaccagagactcagagcgacgtgtttac
agccagtcatctgagaggagtggcagtgtgagctccatgtcgccttcacattttgacaaa
tctgaaaagaacatacttgatcatgcagcaaagggtgaaaagagctctcagcctgatcga
gtgacaggggtggagaaaccgaagcggcctaaaagaaaggataaaactgacaaagaaaag
gctgaaagaggtaaatcaaggaaaccaaagcctcagtccccagcaaacccaataccagaa
acagagacggatgctggtttagatggaggatctggacgaggaagaggatcagatcaagat
gttcatgagaaacagaaatgtaagttggaaggagacaatctgtctggaagtcagttaact
gctcttcaagagtctgttaaaagtgaaatgaacaaatcagatatagcagaggtggatggg
aaaaccagactcaaaaaaaatcctaagactgatgttggaaatgatggaaaagaattagta
gttgacacagatcgccttgctgcaagaaaaaggcgatttggagatttaggtggcaagact
gctcgacagaaaagaagcaggctggaagaggaggatggcagtcagtcatcagactttgga
tcgaataactcctatataaaagaaccagatactgaaaaacataaagattctcagcgacga
gatgcacgacttaaaacagaaaaaagtgtcactcaaaaggatggactggaggatctcaga
ggacaaagagatatacctgaaggatctatagagctgctggagtcaaaacgacaaggaagc
acttcttccagaagggtctcattagaagggaattcagatcaaggcggtattagagagcaa
gaacaaaatgccttattcaaacttaatcaaaatcctgaaaataaaaacaccaagaacaag
gaggaccatgttgacattgacctctctcagagttatcgtaagcagatggagcaaaacaga
cgtctacacctgcagcagcaacaacagcgtgattctgacaaacttaaaaaagcagaaaat
cttcagagaaatgaagcagaggacttagaacatcgtagtcttgtgcatgaagttggtaaa
ccacccgaggatgtcacagataactttccatctcacaaactctctgaacagtttgaagca
gaaccagggataaagagagagcgtgtctatagaagacaaaaaagtgaagatcctgactgg
agtggtacaccctctccaggacaccaggtcttcactcatgtagatgaagaattcatggat
gcttctttaaaagagttgagtcgaaacaatcagaagattcacccagaacttgagctactg
gtgaaaaggactcaaaacacacaggtcaccaagacaaacacccctatgaatatcgttgaa
gacgacccacaaaagaggtgggagagcagagtaaaacaagaaatattacccaatgttaac
ttttctagaaacttaagtaaaactcttcagaaccgcaaaccttcagactatggcctttgg
catgatttagagccaggggaagtgagatcagactctgaagaggacagagaaaacaaaccc
ctctctcctgccccctccacatctatgccttttcccgagaggccaagacctgataggttt
tcagacccaaagctagcacatcttgaaagaaacaaattctattcctttgcacttgaccag
accatcacccctgatacaaaggctcttctggaacgggcaaagtcactctcatcatctcgt
gaggataactggtcatttttagattatgattcccactttgtaaatttccgacatcagaaa
gacacagagaaagtagaatcagctccaagatctacaccttcctggtatatgaaaaagaaa
aaacgaagtggatcagaggtcaaacaggataacaggaaagaagagcccaagccagaggaa
caggaacgcagagaactatttgcctcacgtttccttcatagtgctgtgttcgagctggat
tctagacgacttcaacaccttgagcgcaaatatgaagaacttgagctaaatcaacaagct
agtcagcaaggggcagagggtgaacttgagactggcccagttgtcctttttcacagtcgt
tttttggagctcacgcaactacaacaacaaaaaaacaagagccaacagctgcaagaggat
aaaggaaacacagtatcaacaaatgaaaataaagaggaaaaaccatctgatctggaacaa
caagctccacggcctaatgacacaccagagtcgagtgtggaggcagaaatcaaacccatc
agtcctgttgaacaagttattcctgagcaaagactcactcctaatctagtttctcagcct
gtgatcaaagactcgcctcctttagatcagaagtgcgagttacttcgtccggctactgat
gtatgcccacccgtgaaacaggagataaaggaggaagttaaagaaagggaagatattata
ccgatgctccatccaccaactgagacaataaaacctgaacctgtatccgagactcttgat
gaaactaaaattgctgaggagaagcaggaatttgttgaagagacaaagcccctagttgct
gaacaatcacactgtcctggttctcacgaagagttggttagcatatcagaaccagagcta
ggtcctgagacgtcacaacctgaagtgcctacatccagtagtccaaaccaatcccatctt
actgaagaggcaagtgtaatcaaggaagagccttattctacatgtcaaacagcattagag
tcagatggagataggaaacttgaagttggtaaagagcaagtttctgctgacagtgacaca
gttgaagagccagtctcctttcaaagagaaaaaactaaagagctcaaaactaagaaaggc
aagcaatctcctgcccaagttcctgtaacaccaatctctgcttctgagaaacaagctaca
cgcaagagtgagcgcattgacaaagataagctgaaacgcggctcgtccccaagagccgaa
acaaagtccacagccaagtctccgattcctggatctgaccatgatcaactgaagcagagc
ttaccaataagaggaagaacacgaagaaatgtaaaatctatttatgccactccagttgaa
gaagcaacaccaactcgtggtaaggaaataacagagtcactgcgccctgtacgaaagcgg
cctgcagagaaagaagctgcgcagcacagtactgagctggaggcaccggctccaactccc
acaaagcaacgtggtcgtcctcctaaaaaccgcaaacctgttgaagaggtttcagcttca
aaagcggacaaaataaaaattgacaaagacatggactcaaatgaatcggaaagcacagaa
ggaattcaaagacttaaagggaaatcccctcatattacaaagggtcaaatgccctcagct
caaggctcaaagaaaggggacaaagctgatgcaaccgatgaggctcaagagagaaatttt
acagaagcagatactacacaacagttatcaagtttggtcaaagattcttcagtaaaatct
gatgtaaataaaagtgaaaaagacaaagaaggtgtggaactgggtaaagataaagatgta
catgaaaaaatatgtcagggtaaatcgaatggtaataatactgatgctttagttattgaa
gagcgacttgtcccagagaaagaaaagaccacaagaggaaagctcaagtcagctggggct
tcaaagcctcatgttcttaaggacctccaaatcagactaaatgtcacggaggtcaaagat
cttcttcagctaggtgatgaagagtttggaaatcaagaagacctgtcaaaaaaggtcaga
cctgatgacctacctgaacaagcttcaaggtgctctactgctaacaaagagtcccccagt
gaggaaaaggagaaagaggacatagaagcttcaaagagctcatcctcacaggagcaggaa
ctggagcaggctgttgaaaacatagccaaacttactgacccagcatttccaacagaacca
ccaaacccttctgtccctcctgcagaggtaaaatcggatccagaggaggaaaagccttgt
aatcctgccagtgagacggagctgatggctgctattgattcaataactgttgaagaatca
agtgtacccctcaccccagctgctccaatcaacactgatgttggttcagaatctgaaatc
aatgagtttgtccagccactcaaggttgaagaatctgaaaccggtaatcaggaggaatct
gtcttaacaaatacacccaaaaagggttggaagggaaggcccagaacgcctaaacgagcc
aaagccccaaagtatgccagaaaagatgtaaaagaagaaccatcattaggtgaggagcta
gcagtccctattgctgaaaggacagcctctgatgtaaagattgtgtctgagaaacctcca
cctgctgctgcggctgccgttattacccctacaccctggaaatcagagcctgaacttcca
gctgttaaagcaacagaatcagagctgacatcgtccgtagaagaacaaacacaagccatg
aagccagtacctccccaaggtcagagtcccatatacaccaagcctcaacacttaccagct
gactgcgtttctccttctctgacatcaaacaggcaaaatatcagacccattcaaacatgt
agagcccctgtttcaccacaagactggcgacaacagtctaaggatgtgtttggttcctct
gccaatatgtcagttgcagcaaaagaaggccaaccagcctcagactccattaacaaagag
catgaacaaaggacaagtgacttgaggcagattcttatgaaaaccaaacctgtttcactc
caaggaagtagttctgctcaaaccaatttgcccagccccagagatcagaatccttctgaa
agcaaccctgccattacagctgcaattcagaatagatccccgctccgggatagtaaaacg
ccaactcaatcagcatcagttgtccgaacaccctccacattaacctctgagacaaaatct
gtgatctctgttatcgcttctacggcaacatctgtcattagccgtgtttgcaaccctctt
gagtctgaggagaagcctaatttaaacagtggaaacccatctatagatatgcacaaaaca
gcctacaggcccagcaaagatgagggtggaccataccatggaccacctgatgaagcagga
gcacgcttcattgttgatggccccacttacaactctgtgtcttgctctggtcttagagta
aacacatcagaaggagtggtggtgctgagccactcaggccagaaaacagaaggaccccag
aggatcagtgccaagattagtcaaatcccacaagcaacagcaggcgacatagaatctcaa
cagttggtgtcgattccccagattaagcaagatgtatatgctcattctcagtcaggacat
cagaaggggccttcacagacagatcatgtgcatcctggtaaaccacaatcagctctgtcc
tcaattaagcaggaaagcagcagtttagaaaagatggagccttcataccagtcagggcct
caaggagttgttaagcgtctcccaggacagggtaaccagcaagtcatgggttatcacccg
gactacatgaagttaaaacataaaaaaaaaatggacaatattgatcatggtacggatgga
gttaagccgccgtggacctctaccatcagccctgctataagcccccatctaccttcaccc
cctgggaaccatgtaggttatgtcacagctggtgacagagctcaggcacatcttggcacc
attaaacaggagccaagatccccacggaaatcaggccctccccatcctcctttcaataag
gtgtcctcaccccttggctcatcatcacctaaggggatccctgtaatgttaacctctgct
cttaaccccatgcagcagtatatggcgggagtgcaccatccagagcagtccgttatcatg
ccacctcacaacgtgcctggaggcttgggaagaatgtctcctcactgcgtttcccagact
agggtaaacactccacctctgtctgtgatgaactacgtacacggtgagcagctgccttct
ccttggtccggttcaatgcagccacgatcctcctccccacaggctgttagcagggacaag
gtcctcaaagttaatcatggttctttgcgaggtcatgagggagaacaggaagaatctaga
cacttccaccaagcagggagaccatctgctaccctgccatctgattctcgaggaaccttg
aggacaaatgttttggaaaccttcatagctcagagagacatgcgtgtgcacctgcatcaa
actggggagcagagaatgaccttggacccccattctggacacattcaagaaaccctacca
ccttctgtatcaccgagagctcacattttgtctaaaggcgtgtctgagaaggacctaaag
tctctggaagcaaagaggcctcactctcctcttccaaaggatggaatgatgggaatccga
cagtctggccctgcagtttcatctccccagagggttccactgatgccaccgggtcctagt
gggtcattctcagagtacccaggaatgtacccaaaccgcatccattctcagatcccagac
acgtctgttgggcacaaccagccaccattgaatgtgacaccatgtatgggtgcagacctc
cagacgaaaccagatggcaagatagcacagcctgttaatatggtccagttgctgacgaag
taccccatagtgtggcaaggccttctggcactgaagaatgacactgctgctgtccagttg
cattttgtatgtggaaataaagctctggctcatcgatcgcttcctctgcaagaaggaggt
gctttgctcaggattgtccagagaatgagactagaggcgtctcagttggagagtgtagcc
agaagaatgacgggcgacagcgattactgtcttctccttgctttgccatgtggacgagat
caagaagacgtcataaaccaaactcaaaatcttaaagctgcattcatcaactacttgcag
gcaaaattggcagctggtattatcaacatccccaatccaggttccaatcagcccgcctac
gtgctccagattttcccaccctgtgagttttctgagagccacctatcacagcttgctcct
gaccttttgaacaggatctccagcatctcaccacacctcatgattgtcatcacctctgtg
taa
DBGET
integrated database retrieval system
