Cyprinodon tularosa (White Sands pupfish): 119787235
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Entry
119787235 CDS
T07496
Name
(RefSeq) sodium channel protein type 3 subunit alpha-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctul04040
]
119787235
Ion channels [BR:
ctul04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
119787235
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
IQ_SCN5A_C
Na_trans_assoc
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
119787235
NCBI-ProteinID:
XP_038146904
LinkDB
All DBs
Position
Unknown
AA seq
1614 aa
AA seq
DB search
MSWFEFWSRRMQQTEHQMRTPQLNPSQRNLLHGNYEVRVELQKERMTSLLPPIGVEVFRR
FTPASLEKIQLQQEDEKKKQKPKKNKTKPASHLKAGRPLPFIYGDLPPEFCRTPLEDLDP
FYETQKTFVVVCKEKIIHRFNAESACYLFSPFNPLRTTAIKILLHPVFSWFLILTILTGC
VFMLVEQPLMGMVVECVLLSIFTLELLLKFLSRGVGFGQFTSLRDPWNWLDILNITVTVF
FLCDPFNELDALRTISRVLKLFSYRPGLKKTVEKLVHSLKELADVMVLGVFVLSILTVLG
MQLFMGQLSNRCVMSSPSGMNDTPTPWPYANPNSSEEFAFGDFLCGNSSYARECPDSLCL
RLGKNPDHGFTSFGTFGWSLLSVLRILTQDFFDRLMKMTLEVIGKPYVSAYVLIFFPGCF
VVVSLIVAAVAILLVKQEEAEAAEAKKAEKEFTRIVKVLKKREEKEATDGTELLEDLDSA
HKKKPAANTKEQEPLTGEDDADKVKPLCSSHWNRVLENDCCSCSQWLKQKLRPIVMNRFF
ELGIIICIILNTILMAMEHYPMTPEFENLFLLNEVFLAIYVAEFLLKLLALGVKGYFQVR
WHIFDFIIVLSGLLLLMIADVQGLWVLRSVQLLVSLRLGRWWHTLSLLMKITWFSFGNLS
RVLFWAFFMFAMVGMKLFKDDYYRELPEWHMDDFVHSILLVFRILCGEWIETMWDCMLVS
NDGLCVVYFMVVVFIGNLLVLCLFLSLLLSPLYAKASGGAEGQETNKSQSRPWVPEFFRT
LIGKNLCVDIDQKAATSKTNGKEDYLALTVVTSEQPSLRDPSNDSTKIQTAANNKENKQE
CDGVQKSLDNRNLTKNTPGDCCCSVCYNCFSIQDIDTSQGSGKVWFKFRKACLLIVQHRV
FEVFMIFIILLSSAALVLEDTLIEPNEVMQEVLDKADLVFTCLFLTEMLLKWIALGFKQY
FTSFWCWLDFLVLDVSMFGLIGKTLGYSSNSLKTLRALRTLRVPSRFKGMRVVLQSIAAS
VPSMCSALLVVLFVWLNFSIMGVNLFAGKFYSCFNMTTKERMDWDHIANKTDCLYIQENN
TDICWRNEHFNFDNVGMAFLSLLVMATSAGWKDIMHDAVDSTQVEDQPQFEYRLNMYLYF
VLFIIFGCFFCSNLLIRACIDALHKQNNKAGGKHVLRTEQQLKFHVTVGKIFPKSPEKAA
PRPQNRCIARLFDLVTAPTFEILVVVVICVKVLSMMMERDDQSMLAYTVMMWFHFIIMIL
FLIEFILKIIALRQHYFSFGLNILDFVVLIYAIFGFFFHDIFEKYLIIDIFILRLLRISR
VLPLIPWTKRLQKLIIGFIMSIPALLNIGLVIFLVVYTYSFVGMCTFCTVEMESWLYNFD
TFGNSMISMITVTTSSHWNRFLYSIMEELVECDLKTPDSSSDFGRPYTGIFFFSSYMLLY
LLLVIHLFIAVVMESFNSIKSEDSNLLQMFYKTWRKFDPNALQVIQYTELSDFCDALPAP
LRIPKPNSIQLNHMDLPLLAGDQICCFDVLRALMTQAFGESAETEALQARLKEKFNNAEK
VSREPVSSTLKRKQEQVAAAVIQRAFRKHQVQNRADETPDQAVGETTDVLVSSH
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggtttgagttctggagcaggaggatgcagcaaacagagcatcagatgagaact
cctcagctgaacccctctcagagaaacctgttacatggcaactatgaagtccgggtagag
ctacagaaagagaggatgacatctctgttgcccccaattggcgtggaagtcttcagacgc
tttacaccagcgtcactggagaagatccaactacaacaggaagatgagaagaaaaaacag
aaaccaaaaaagaacaaaaccaaaccagccagtcacctgaaggctgggagaccccttcct
tttatttacggggacttgcccccagaattttgcagaacccctctggaggatttggatccc
ttctatgaaactcagaagacctttgttgtagtgtgtaaggaaaagataatacacaggttt
aatgctgagtcggcctgttacctgtttagtcctttcaaccctctgaggaccactgccatc
aagatcctcctccaccctgtgttcagttggtttctcatcttgacgattttgactggctgt
gtgtttatgctggtcgagcagccattgatgggaatggtagttgagtgtgtgttgttaagt
atcttcacccttgagctcctcctgaagtttttgtccagaggcgtgggctttggacaattc
acctccctcagggatccctggaactggctggatatcctcaacatcaccgtgactgttttc
tttctatgtgatccttttaatgaattagatgctttgagaacgatttctcgtgtattgaag
ctcttcagctacagaccaggtctgaagaagacggtcgaaaagcttgtgcattcactcaag
gagctggctgatgtcatggtccttggggtatttgtcctgagtatcttaactgtgcttggc
atgcagcttttcatgggtcagttgagcaataggtgtgttatgagctcaccatctggaatg
aatgacacaccaaccccttggccctatgcaaaccccaactcttctgaagagtttgctttt
ggagactttttatgtgggaacagctcatatgctagggagtgtccagattccctttgttta
agacttgggaagaacccagaccatggattcaccagctttggcacatttggttggtctctg
ctgtctgtgttgagaatattgactcaggacttcttcgataggcttatgaaaatgactttg
gaagtaataggtaaaccctatgtgagtgcctatgtgctcatattctttcccggatgtttt
gtggtggtaagcctcattgtggcagcagttgcgatattgctggtgaaacaagaggaggct
gaggctgctgaagccaaaaaagctgaaaaagagttcactcgaattgtaaaggtgctaaaa
aagagagaggagaaggaggccacagatgggacagagctcttggaagatcttgattcagca
cataagaagaaaccagcagcaaatactaaggaacaggaacctctcactggggaagatgat
gcggataaagtcaagcctttgtgcagctctcattggaacagagtcctggagaatgactgc
tgcagttgctcacaatggcttaaacaaaagctccgtccgattgtgatgaatcgttttttt
gaactaggaataataatttgcatcatcttaaacactatccttatggccatggaacattat
ccaatgacacctgaatttgaaaatctgttcttgctaaacgaggtgtttcttgcaatctac
gtagcagaatttctacttaagcttttggccctgggtgttaaaggctacttccaggtgaga
tggcacatatttgacttcatcattgtcctctctggcctgttgcttcttatgatcgcggat
gtgcagggactatgggtgctgagatcagtacaattgctggtatcactgaggttgggacgt
tggtggcacaccttgagcctgctgatgaagatcacctggttttcatttgggaatctcagt
cgcgttctattttgggcattcttcatgtttgcaatggttggcatgaagctctttaaggac
gactactatcgtgagcttccagaatggcacatggacgactttgtgcactccatcttgctt
gtcttcagaatcctctgcggagagtggattgagaccatgtgggactgcatgctggtttcc
aatgatggcctatgtgtcgtctacttcatggtggttgtgttcattggaaacctgctggtg
ctgtgtctgtttctttctctcttgttgagcccattgtatgctaaagcatcaggaggtgca
gagggacaagaaacaaataaaagtcagagtcgaccatgggtcccagagtttttcaggact
ttgataggaaaaaatctgtgtgttgacatagatcagaaagcagccacgtctaagaccaac
ggcaaggaagactatctggcattaacagttgttacgtcagaacagccatcccttagagac
ccaagtaatgattcaaccaaaatccaaacagcagcaaataacaaagagaataagcaggaa
tgtgatggggtgcagaagtctctggacaacagaaatctgacaaaaaacacacctggagac
tgctgctgttcagtttgttacaactgcttttcgatccaggatatagacacatcccagggt
tctgggaaggtgtggtttaagttcaggaaggcatgtctcctcatcgttcaacacagagtg
tttgaagtctttatgatcttcatcatcctgcttagcagcgctgctttggtcctagaagac
acactcatagaacccaacgaagtcatgcaggaggtgctagacaaagcagacctggtgttc
acctgcctgttcctgacagaaatgctgctgaagtggatcgccttgggattcaagcaatac
ttcactagcttctggtgctggcttgacttccttgtcttagatgtctctatgttcggtttg
attggtaaaacactgggatactccagcaattcgctaaagaccctgagggccctgaggacc
ttgagggtaccatcccgcttcaaaggcatgagggtggtgcttcagagcatagcagcaagt
gtcccctccatgtgcagcgcactgctggttgttctgttcgtgtggttgaacttcagcatc
atgggagtaaatctgtttgcaggaaagttttactcctgttttaatatgaccacaaaagaa
agaatggattgggatcatatcgcaaacaagacagactgtctttacattcaggaaaacaac
actgatatctgctggaggaatgaacatttcaactttgacaacgtgggcatggctttcctt
tcactgctggttatggcaacatcagcaggctggaaagatatcatgcatgatgctgtggac
tccacacaggtggaggaccagccacagtttgagtacagactgaacatgtatctgtacttt
gtccttttcatcatcttcggctgcttcttctgctccaacctcctcatcagggcctgtatt
gatgctctccataagcagaataacaaggctggagggaaacatgtcctcaggacggagcag
cagctaaagtttcatgtaactgtaggaaagattttccccaagtcacctgagaaggctgct
ccacgcccacaaaaccggtgcattgctcgcctgtttgatctggtgactgccccaacattt
gaaatcctggttgtggtagtaatttgtgtgaaagtgttgtcgatgatgatggaaagggat
gatcagtctatgctggcatacaccgtaatgatgtggttccacttcatcatcatgattctt
ttcctcatcgagttcatcctgaaaatcattgcactaagacagcactacttcagctttggc
ctcaacatcttggactttgtagtcctgatctatgcgatttttggattcttctttcatgat
atctttgagaagtatctcataatagatatctttattcttcgactgcttcgaatcagcaga
gttctcccattgatcccctggaccaaacggttgcagaagctgatcattggctttataatg
tctattcctgccctcctcaacattggcctagtcatcttccttgtggtgtacacctattcc
ttcgttgggatgtgtactttttgcactgtggagatggagtcttggctttacaactttgac
acatttgggaacagcatgatcagtatgattaccgtcacaacctcctctcattggaaccgt
tttctgtattccatcatggaagagcttgtagaatgtgacttgaagacacctgactcatct
tcagactttggccgcccatacacaggcattttctttttctcatcctacatgctgctgtac
ctgctgcttgttatccacctcttcattgcagttgtcatggaaagcttcaacagcatcaaa
tctgaggactctaatttactgcaaatgttttacaaaacctggaggaagtttgatcctaat
gccttacaggttatacagtacactgagctgtctgatttttgcgatgctcttccggctcca
ctgaggatacccaaaccaaacagtatccaactgaaccacatggatctgcctcttcttgca
ggagaccagatctgctgctttgacgttctacgagcactcatgacacaggcatttggtgaa
tcagcagagactgaagctcttcaagccagactgaaagaaaagttcaacaacgcagaaaag
gtgtctcgtgaaccagtcagcagcaccctgaagagaaaacaggaacaagtggcagcagca
gtgatccaaagagccttcaggaaacaccaggtgcaaaatagagctgatgaaactccagac
caggctgtgggagaaaccacagatgtgttggtgtcttcccattga
DBGET
integrated database retrieval system
