Cyprinodon tularosa (White Sands pupfish): 119789722
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Entry
119789722 CDS
T07496
Symbol
cacna2d1a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1a isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04010
MAPK signaling pathway
ctul04260
Cardiac muscle contraction
ctul04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119789722 (cacna2d1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
119789722 (cacna2d1a)
04261 Adrenergic signaling in cardiomyocytes
119789722 (cacna2d1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctul04040
]
119789722 (cacna2d1a)
Ion channels [BR:
ctul04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119789722 (cacna2d1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
Cache_3-Cache_2
CaKB
DUF2201
Motif
Other DBs
NCBI-GeneID:
119789722
NCBI-ProteinID:
XP_038150705
LinkDB
All DBs
Position
Unknown
AA seq
1095 aa
AA seq
DB search
MDYSLCLLVLLTTVSVSHGQFPTPQMVKDWVEQIQKELITLTDKASGLQDLIEIYKKHRT
HFSVESNNATELVATASKNIEQLLANRSDALKRLATEAERLQKEHEWRVDSDPNKLLYYN
AKDGMNRTSLEKEQETEEEKRNRFIPDDFEIDPTFKRHVSYNTTAVHIPTDIYEGSTIIL
NELNWTDALDDVFRKNKEEDESLLWQVFGSATGLARYYPASPWIDKRSAPDKIDLYDVRR
RPWYIQGAASPKDMLILVDASGSVSGLTLKLIKTSVSKMLETLSDDDFVNVVSFNKTAKP
VACFEHLVQANVRNKRILKDAVQKLKAEGITNYTSGFELAFAQLAQANVSRANCNRIIML
FTDGGEERAEEIFQKYNPKQEVRIFTFSVGQHSYDKGPIQWMACNNKGYYYEIPSIGAIR
LNTQEYLDVLGRPMVKADSRSKRKSKAKEVQWTNVYLDALELGLVITGTMPVFNKTNTGS
KKSQNQLILGVMAIDVSLEDIKRLTPRFTFGPNGYYFAIDPNGYVLLHPNLQPLTAKFDE
PVTLDFLDAELENDIKVEIRTRMINGKTGKYTISTLVKSQDERYIDQGQRTYTFAPVNGT
DYSLALVLPDYSMKYIRAKLGDTITQAKWKEVSESLLADNFDEYGYTFIAPRMYCTDLKP
PDKETNNTEFLMDFNNYIDTRTPNDPSCNVELVNRLLLDAGITADLVKFWKQNEFEQGIV
ARFVATDGGITRVFPKSAGLDWKEEAETYESSFYKRSLDNDLYMVKPTRYNESGKNVLVS
RAVNLNIDGFTLKPAVVGVKMDIYQWMESFISIEYWKNCKNEICGCRKDDPYIHCVLLDD
GGFMVMSNQMDDLDQIGQFFGVIDPDLMRALVNSSLFTAKSTYDYQSLCEPKRESKAAAG
LRSIYVPTIADILNLGWWATAAAWSIVQQLLVSITLPNVLDAAEMDDTESDAMTKEVCIT
EQTQYFYENKDSSFEGSFECANSTRQYLAEKVPNTNLVFIISDRQQGDSQSFCTPKLVQE
EQASDGPDACEMALRPRHRKGPMNCFDQTEHDEAMCRRSAGSPLASSLLMLLLPLFMCCL
GLVFVLVCFCSLYIL
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggattactccctctgtttgttggttcttctgacgaccgtgtctgtttcgcacggacaa
ttcccaacaccccagatggtaaaagactgggtggagcagattcaaaaagagttgatcaca
ttaacagacaaagccagtggattgcaggacctaatagagatatataaaaaacacagaacc
cactttagtgtggaatccaacaatgccacagaactggtggcaacagcttcaaagaacata
gagcaactgctggctaaccgctctgacgccctaaagagacttgcaactgaggctgaaagg
ttacaaaaggaacatgagtggagagtcgacagtgatcccaacaaactcctttactacaat
gccaaggatggtatgaataggacctctttagaaaaagaacaagagacagaagaggagaag
agaaaccggttcattcctgacgactttgaaatagacccgacctttaaacgccatgtctcc
tacaacaccactgccgtccacatccctacagacatatatgaaggctccaccattatttta
aatgagctaaactggacagatgccctggatgatgttttccggaaaaacaaagaggaagat
gagtcactgctatggcaggtatttggctctgcaactggactggctcggtattacccagcc
tccccctggatcgacaagagaagtgcgcctgacaagattgacctgtatgacgtacgcagg
cgaccttggtacattcagggggcggcgtcacccaaggacatgctgatcctggtagatgcg
agtggaagtgtttctggtctcacccttaaactgatcaaaacatccgtcagcaagatgctg
gagaccctctctgatgatgactttgtaaacgtggtttctttcaacaaaaccgccaagcct
gtagcatgctttgagcacctggtgcaggccaatgtgaggaacaaaaggatcctgaaggat
gctgtgcagaagcttaaagctgagggcatcaccaactacaccagtggctttgagcttgcc
ttcgcacagcttgcacaggccaatgtgtcgagggccaactgtaacaggattataatgctg
ttcactgatggaggagaagagagagcagaggagatctttcagaaatacaaccctaagcaa
gaggtgcgcatttttacattctcagtgggtcagcacagctacgacaaagggccaatacag
tggatggcctgcaataataaaggttactattatgagattccatctattggggccattcgg
ctgaatactcaggagtacttggatgttttgggtcggccaatggttaaagctgacagcagg
tccaagaggaaaagcaaggctaaggaagttcagtggacaaacgtctacctggatgcactg
gagcttggtcttgtaatcacaggaactatgcccgtcttcaacaagaccaatacaggctca
aagaagtcacaaaaccagctcatcctgggagttatggctattgatgtctccctggaagat
atcaagagacttactcctcgtttcacatttggtccaaatggctactactttgctattgat
ccaaatggctatgtgttgctccaccctaatcttcagccactgactgctaagtttgatgag
cctgtaacactcgactttctggatgcagaattggagaacgacatcaaagtggagataaga
actagaatgataaatggaaaaacagggaaatacactatatctacattggtaaaatctcaa
gatgagcgctacattgaccaaggtcagaggacctacacctttgctcctgtgaatggaaca
gactacagcctggccttggttctaccagactacagcatgaaatacatccgtgcaaaatta
ggcgacacaataacccaggcaaaatggaaagaggtttctgagagcctgcttgctgacaat
tttgatgaatatgggtacacattcattgcaccaagaatgtactgcacagacttaaagcct
cctgacaaggaaacaaacaacacagagttcctgatggactttaacaactatatcgataca
aggactccaaacgatccttcgtgtaatgtagagcttgtgaacagacttctccttgatgcc
ggtatcactgctgatttggtcaaattctggaaacagaatgagtttgaacaaggtatcgtt
gccagatttgtagcaactgatggaggaatcactcgcgtcttcccaaaaagtgcagggttg
gactggaaagaagaagcagagacctacgagtcaagtttctacaagcgaagtttagacaat
gatctgtacatggtcaagccaactcgctacaacgaaagtggtaaaaatgtccttgtgagc
cgagcagtaaacctcaacattgatggttttacactcaaaccagctgttgttggtgtaaaa
atggacatctatcaatggatggagagcttcatcagcatcgagtattggaagaattgcaag
aatgagatctgcggctgtaggaaagatgatccgtatatacactgtgttctgctggatgat
gggggattcatggtgatgtccaatcaaatggacgatctcgatcagatcggccagttcttt
ggcgtcattgaccctgaccttatgagagctttggtcaactcgtcactgttcaccgcaaag
agcacctatgactaccagtctctttgtgagcccaagagagagagcaaggcggctgcaggc
ctgcgatcaatctatgtacccacaatagccgatatattaaacttgggatggtgggcaaca
gctgcagcctggtcaattgtgcaacagctgctggtcagcatcacactcccaaatgttctg
gatgcagctgagatggatgacacagagtctgatgcaatgactaaggaggtgtgcattaca
gagcaaactcagtacttctatgaaaacaaggattcatcttttgaagggtcatttgagtgt
gcaaactccaccaggcaataccttgctgaaaaggtgcccaacacaaacctggtctttatc
ataagtgacagacaacaaggtgacagccagtcattttgcacgcccaagttagtacaggaa
gaacaggcatctgatgggccggatgcctgcgaaatggctctcagacctcgccacaggaaa
ggccctatgaattgttttgatcaaaccgagcacgatgaggccatgtgccgaaggagcgct
ggctccccattggcttcctctctgctcatgttactgctgccgctgttcatgtgctgtctc
ggtcttgtttttgtccttgtttgtttttgctcactttatatcttgtag
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