Cyprinodon tularosa (White Sands pupfish): 119790846
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Entry
119790846 CDS
T07496
Name
(RefSeq) protocadherin-15-like isoform X1
KO
K16500
protocadherin-15
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
119790846
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ctul03037
]
119790846
04515 Cell adhesion molecules [BR:
ctul04515
]
119790846
Cilium and associated proteins [BR:
ctul03037
]
Primary cilia and associated proteins
USH complex and associated proteins
119790846
Cell adhesion molecules [BR:
ctul04515
]
Cadherins
Protocadherins
119790846
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
ECD
PCDH15_12th
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Ig_Cad99C_N
Cadherin_2
CDH23_a-b
Ig_BT4661_1st
Motif
Other DBs
NCBI-GeneID:
119790846
NCBI-ProteinID:
XP_038152496
LinkDB
All DBs
Position
Unknown
AA seq
2177 aa
AA seq
DB search
MRRGRWLVRWLGTAMAILSLITHSWGQDTEDWQYEECKLSRPGPPATIVTIDEESPNGTV
LVENMQINGRARDPGRTISLTLLDNYDYWVILEPARQRLYLNSTGRVLDRDPPNYITTIV
VQVQCTNELVGTVILHEVRIVVRDRNDNSPQFQQPRYYVSINELTPVGTTIFTGFSGNNG
ATDIDDGPNGHIEYSILYNPNDPESNNTVRVGNTLSGSIILAQRLNYEDKTRFFVLIQAS
DRAPYPPNRLTATTTLTVDVLDGDDLGPMFLPCILVNNTRDCNPLTYRAAIPEFTEPTKL
NPLNVTPPIRAVDMDRNIQPPSERPGILYYILVGQPNTYPEYFSLNRTTAELLVLKPISR
DLYQRFTLIIKAEQDNGHPLPAYADLIIEILDENNQAPYFQFASYQGYVSESSPVGTTIS
ASSNLTAPLGIIALDNDIEELSPGDTPTKDPMVKITLDDYTTIFSLTPTGIIRYLRILKP
VDREQQMTYTFTMMASDGVQQSSPVTVNILVIDANDNTPTFAQVSYSVEVFTDMQPGETV
LQLTAVDADEGLNGLVTYEILAGAQGDFVINNRSGRITVAPGVTLTVGRSYALTVKASDN
APDTQRRSSITTVYIEVLPPNNQSPPRFPLLTYNLEISEAMRIGAILLNLQATDRENDPI
TYRIVSGDSLKVFNLSETIGLLLLDKPLDRESTEQYRLIVTASDGNPGGTSTATVNIVVT
DVNDNDPKFEVILSSNFTVKEEQANLFVGQVRATDPDAGANGQVFYRIVNHPDLFLISAN
GSIYTRQPLDRELRNEYNLVIEASDGAVDPRRTTLTLLVQVLDIDDNSPVFSQQDYVVNV
PENTPVGTVVLKLSAVDADVFSNVTYRIKTESARQLFSLNPITGELAVLQTLDFEGLAAM
GMGASYTFQVEAVDQGGLMPPGQATVTIRITDMNDFSPIFTQELYKGLVAPNADKGTVIT
TVFAEDQDPPGTPASLVRYRVDLEKSPYSGSIFDVEEETGRVITKVNLNEDPSITFKLFV
IAFDNGEPVKTNSTLVEITVLQPSLIPIFTQEEYRFPAVKELSPVGTAVGTILAAAMNQT
IFYSIVGGNELGHFKVDSSTGVISIAKPLDYENITSYVLRVQADSLGVVMSNLRVPSKSN
TAKVFIDILDENDHPPVFSRKLYIGGVTEDTKIFSSVLKIVATDKDTGNFSAMAYRLIIP
PTAEGQDSFVIEAYTGIIKSAIMFRNMRRSYFKFEVIATDDYGEGFSSSAEVVVSVVNAL
DMQVVVSTVPPTLVEENKEELIRILERHVQDQIPGAKVIVESIGPRRHGDGFELEDYSKS
DLMVYAIDPLTNRAISRQELFKFLDGNVLEINKEFQPYLGEGGRILEIRSPDVVASVKKA
AQAVGYTEGALLALAIIIILCCIPAILIVMVTYKQFKERQAECAKTARIQMALPPGGKAA
PAAAPTANLYEELGDSSMRRAPGRQQQLLRPSLLRPEELSMESGIEPGQDYYTQDYYNYD
QGYDFPQYGSRRRLISPMYDEYGEVIMEDDGYYYSPHGQEGRGRGRGGMRGRGPPKRVAF
RDLPAEDEIVQPQPAEEGEPSKAAKRLKSVMKLSKLLAASKGGEQPSDAGTSGPSSWKKA
KMLKMFGAGKKDKDYAKLMSARRIDSQESLTDRPAVIGPIDSKSDARSRLSKVLKRITIG
NKLQVRRKSQSSVSHGSATGSEKDEEASQAASEDESKSKVSISVTESEPEGGASGSSKEK
DSDEESSEKSSVDRDYLKVDLDRDDTNESTVDSEEEPDEEPGDSDEESKSKSEEETEKES
GSEKDSETERESESEKESVSGKSSATGKESETEKESDSDEESSSGKETESGTGTATEKEM
STERDSATEKDSDEESEEDEASESTRESASSTHSSMRSSAAETSRRSSASGTVSGSESAT
ETASESGSRSGSGSRSGSRSGSGSGSGSGSRSGSARSGTPSSRTSAGSLPRTSLSRETSE
KSSKELSETESGTGTASDTESGSRSASERSSSWGSRKEKKATLDLSKRSSSGSQHSFGSN
SAGSRSTSGSRRSVLSHGSEGTITEESEEEEKEEEEESGTADESKDSVSEVSDESSSRRS
SVVSEDPGSSASYHGQPHSSEIRSTSEDTYGGLSPITEVDEDAISSDKASVSTSKGSEGT
EETSDGDSESEGSSTAF
NT seq
6534 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgggggcggtggcttgtcagatggctgggaacagcaatggctatcctctctttg
attacccacagctggggccaggacacagaagactggcaatatgaggagtgtaaattgtcg
cgacctggaccccccgcaaccatagtgaccattgatgaggagagccccaatggaacagtt
ttggtggaaaacatgcaaattaatggaagggcccgcgatccaggtagaaccatctccctg
acactacttgacaactatgactactgggttatactggaaccagcacggcagagactttac
ctcaacagtaccggacgcgttctggacagagatccacctaattacatcacaacgattgtg
gttcaggtccaatgcactaatgagctggtcggtacggttattttacacgaagttcgaatt
gttgtgagggacagaaatgacaacagtccccaatttcaacagccacgctactatgtttct
ataaatgagctcacaccagttggaactaccattttcaccggcttctcaggaaataatggt
gctacagacattgatgatggaccaaatggacatatagaatacagcatcctttacaatccc
aatgatccggaatctaacaacacagtcagggttggtaacaccctttcaggaagtattata
ctggcacagaggctaaattatgaggacaaaacccgcttctttgtattaatccaagccagt
gaccgtgctccatacccaccaaacagactaacagctaccacaactctgactgtggatgtc
ttagatggagatgaccttggtccaatgtttctgccttgcattttggtgaacaacacccgt
gactgcaacccactcacctaccgtgctgctatccctgaatttactgaaccgactaaactg
aacccacttaatgtgaccccacctatccgggctgtggacatggacagaaacatacagcca
ccatcagagagacctggcattctttattacatcttggttggtcaaccgaacacatatcca
gagtacttctccctgaaccggaccactgcagagttgcttgttctgaaacctattagccgg
gacctgtatcagaggttcacacttatcattaaggcagaacaggacaacggacatccctta
ccagcttatgctgacctcattatcgaaatactggatgagaacaaccaggcgccatatttt
cagttcgcctcctatcagggatacgtgagcgagtcctccccagtggggacaactatttct
gccagttccaacctcactgcccctctagggatcattgctttggataatgacatagaagag
ctgtcccctggtgatacacctaccaaagaccctatggtgaagattaccctggatgactac
accacaattttcagcctgaccccgactggcataatccgctacctgaggatcctaaaacct
gtggaccgggaacagcagatgacttatactttcacgatgatggcatcagatggtgtccag
cagagtagcccagtaactgtcaacatcctggttattgatgccaatgacaatacacccacg
tttgcacaggtctcctacagtgttgaagtctttacagacatgcagccaggggagacagtt
ctacagttaactgcagtagatgctgatgaaggactgaatggtctggtgacgtacgagatt
ctggctggggcccaaggagactttgttattaataatcgatctggacgtatcactgtggcg
cctggtgttacgttaactgtgggccgatcatatgcactaacagtgaaagcctcagacaat
gcaccagacacccagagaaggagctccatcactacagtttatattgaagttttaccaccc
aacaaccagagtcctccacgcttcccccttctcacctataacctagagatcagtgaggcc
atgaggattggagctattctccttaacttgcaggcaacagacagagaaaatgatccgatc
acttatcgaattgtgagtggggattcactgaaggttttcaatctctcagaaacgattggc
cttttacttttggataagcctttggacagagaatccacagaacagtatcgtctgattgtc
actgcttcagacggcaaccctggagggacgtccactgctactgtaaacatagtggtgact
gatgtcaacgataacgacccaaaatttgaagtcatcctcagctctaactttactgttaaa
gaagagcaagctaatctgtttgttggacaagtcagagccactgatccagatgctggagcc
aacggtcaggttttctacagaattgtcaatcatccggatttgtttctgatcagtgccaac
ggaagcatctacacaagacagcctcttgacagggagttaaggaatgaatataacctggtg
attgaggcctcagatggggcggtagaccctagaagaaccaccctgacactattagtccag
gttctggatattgatgacaacagcccagtcttctcacagcaagactatgtggtgaatgta
cctgagaacacccctgtcgggactgtagttctgaaactaagtgctgtggacgctgatgtc
ttctccaatgtcacataccgcatcaagactgagtcggccaggcagttgttctctcttaac
cctatcactggggagctagctgtgctgcagaccctggacttcgagggcctggcagctatg
ggaatgggggcttcatacactttccaggtagaagctgtcgaccaaggaggactaatgccg
ccgggacaggctacagtcacaattcgcatcacagacatgaatgacttctcacccatcttc
actcaagaactgtacaagggcttggtggcacccaatgcagacaaaggaacagtcatcaca
accgtttttgctgaggaccaagacccaccaggcaccccagccagtttagtacgctacaga
gtggacctggagaagtccccctacagcggaagcatctttgatgttgaggaggaaactggc
agagtcattaccaaagtcaacctcaatgaagacccaagcatcacctttaagttgtttgtg
atcgcctttgataatggggagccagtgaagacaaacagtactttggtggagatcactgtc
cttcagccctcacttatcccaatcttcactcaggaagagtataggtttcctgcagtcaaa
gagctgtctccagttggcactgcggtggggactattctagctgctgctatgaatcaaacc
atcttctactccattgttggaggaaatgaactgggacactttaaagtagacagcagcact
ggtgtcatctccattgccaaaccactggactatgagaacataaccagctacgtcctcagg
gtgcaggcagattctttgggggttgtcatgtccaacctgcgtgtgccttctaaaagcaac
acagccaaggtgttcattgacatactggatgagaatgaccaccctcctgttttctccagg
aagctctacattggtggtgtaactgaggacacaaagattttcagctctgtccttaaaata
gtggccactgataaggatactgggaacttcagtgccatggcataccgcctgattatacct
ccaacagcagagggtcaagacagctttgtcatagaggcctacactggtatcattaagtca
gccatcatgtttcgaaatatgcgcaggtcttacttcaagtttgaagttattgccactgat
gactatggggaaggttttagcagcagtgctgaagtggtggtttctgtagtcaatgcatta
gacatgcaggttgttgtctccacggtacctcccactttagtggaagagaacaaagaggag
ctcattagaattctggaacgacatgttcaggaccagattcccggagccaaggtgatcgtt
gagtcgattgggccacgtcggcatggtgatgggtttgagctagaggactattctaagtca
gacctaatggtgtatgccattgacccattaacaaacagggccatttcccgacaggagctc
ttcaagtttcttgatggaaatgtcttggagatcaataaagagttccaaccatatctgggt
gagggtggccgtatccttgagatccgctcgcctgatgtcgtggccagcgtgaagaaggct
gctcaggccgtgggctatacagagggagcactgctggccctggccattatcatcatcctg
tgctgcattcctgccatcctaattgtcatggttacctacaaacagttcaaagagcggcaa
gcagagtgtgccaaaactgccaggatccagatggctttaccaccaggagggaaagcagct
ccagccgctgcccccactgctaacctctatgaagaactaggtgacagcagcatgaggcgt
gctcctggcagacagcaacaactgctaaggccatctctactgagaccagaggagctctca
atggagtcaggcatcgaaccaggccaagactactacacacaagactactataattatgac
caaggatatgactttcctcagtatggaagtcggaggaggctgatatcccccatgtatgat
gaatatggtgaggtgatcatggaggatgatgggtattactacagtccacatggccaagag
ggccgaggcagaggccggggtggaatgagaggtagaggtccaccgaagagagttgcattt
agggacttgccggcagaggatgaaatagttcaacctcagccagcagaggaaggtgagcct
tctaaggctgccaagagattgaagtctgtcatgaaactcagcaaactcttggcagccagc
aaaggaggagagcaaccatctgatgctgggacttctggcccatcttcatggaagaaggcc
aagatgctcaagatgtttggcgctggaaagaaggacaaggattatgccaaactgatgtca
gcccgccgtattgacagccaggaaagtcttacggacagaccggcagttattggcccaata
gatagcaagtcggatgctcggagccgacttagcaaagttttaaagagaattaccataggc
aacaagttgcaggtcagaaggaagtcacagagtagtgtgagtcatggctcagccacaggc
agtgagaaagatgaagaggcttcacaagcagccagtgaggatgagagtaagtctaaagtg
tctattagtgtgactgaaagtgaaccagaaggaggtgcaagtggaagcagtaaggagaag
gattctgatgaagaatcctctgaaaagagcagtgttgacagggattatctcaaagtcgat
ttagacagagatgacacaaatgaaagtactgtggactctgaggaagagccagatgaagag
ccaggggactctgatgaggaaagtaagtctaaatctgaagaggaaacagagaaggagtca
ggcagtgagaaagactcagagactgaaagagagtcagagtcagaaaaggaatctgtgtct
gggaagtcttcagctacagggaaagagtcagaaactgagaaagagtcagattctgatgaa
gagtcgagttctggtaaggaaacagaatcagggacaggcacagcaacagaaaaggaaatg
agcacagaaagggattcagctacagagaaagactctgatgaagagtctgaggaagatgag
gcatcagaaagcactagagagagtgcctcttctactcacagttctatgagatcctcagct
gctgagaccagcaggagaagcagtgcttctggcactgttagtgggagtgaaagtgcaact
gaaactgcaagtgagagtggcagcaggagtggtagtggcagtaggagtggcagtaggagt
ggtagtggtagtggtagtgggagtggtagtaggagtggtagtgccagaagtggcacacct
tcttctcgaacaagtgcaggctcattgccaagaaccagcttatcaagggagacgtcagag
aagtccagcaaagaacttagtgagactgagtcagggacagggacagctagcgatacagag
tcaggatcaaggtcagcaagtgaacgttcttcatcttggggatctaggaaggaaaaaaaa
gcaactttagacctaagtaagagatcatcatctggcagtcaacattcctttgggagtaat
tcagctggctccaggtccaccagtggaagtaggcggtctgtcctgagtcatggttcagag
ggcacaatcactgaggaaagtgaggaagaggagaaggaggaggaggaagaatctgggact
gctgacgagagcaaagactctgtgagtgaggttagcgatgaatcgtcttccagaaggtct
agtgtagtgtctgaagatccaggatcttctgcttcctaccatggtcagccccatagctct
gagatcagaagtacctctgaagatacatatgggggactgtccccaatcactgaagtggat
gaggatgccatctcctctgataaagcgtcagtcagtacatcaaagggttcagaaggcaca
gaagaaacatcagatggtgattcagaatctgaagggagctcaacggccttctag
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integrated database retrieval system
