KEGG   Cyprinodon tularosa (White Sands pupfish): 119792213
Entry
119792213         CDS       T07496                                 
Name
(RefSeq) breast cancer type 1 susceptibility protein-like
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03440  Homologous recombination
ctul03460  Fanconi anemia pathway
ctul04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    119792213
  09124 Replication and repair
   03440 Homologous recombination
    119792213
   03460 Fanconi anemia pathway
    119792213
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ctul01009]
    119792213
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ctul04121]
    119792213
   03036 Chromosome and associated proteins [BR:ctul03036]
    119792213
   03400 DNA repair and recombination proteins [BR:ctul03400]
    119792213
Enzymes [BR:ctul01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119792213
Protein phosphatases and associated proteins [BR:ctul01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119792213
Ubiquitin system [BR:ctul04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119792213
  Multi subunit type E3
   BRCC complex
    119792213
Chromosome and associated proteins [BR:ctul03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     119792213
DNA repair and recombination proteins [BR:ctul03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     119792213
    BRCA1-A complex
     119792213
    BRCA1-B complex
     119792213
    BRCA1-C complex
     119792213
    BRCA complex
     119792213
   FA (Fanconi anemia) pathway
    Downstream FA components
     119792213
SSDB
Motif
Pfam: BRCT BRCT_2 zf-C3HC4 zf-C3HC4_4 zf-RING_UBOX zf-C3HC4_2 RING_XB3-XBAT31 zf-C3HC4_3 zf-RING_2 RTT107_BRCT_5 zf-RING_5 zf-Nse PTCB-BRCT zf-ANAPC11 zf-rbx1 TRAF3_RING zf-RING_4 U-box zf-RING_6 zf-RING_10 Lmo2446-like_N zf-MIZ Sina_RING
Other DBs
NCBI-GeneID: 119792213
NCBI-ProteinID: XP_038154667
LinkDB
Position
Unknown
AA seq 1312 aa
MTTPKAEDVRKGIAVLWETLQCPICLELMTAPVSTKCDHQFCKFCITKLLDNSKPNRATC
PVCKSKITKRSLQESPGFQRLVAGLQDMIQAYEHDTSTNYFTGLPQERMNANITDRETSK
HAANLSSGNTFGTDLNNLETTGCDDHPQSCSSTAAALNGFAQLMGLEDSVSVTAENEGLD
GRLCDIPPASDRKTSNSADHLETENVGKNASSSRSKPENSDCLKPTQEETVQQPVRKSSR
KKQKKEVDPEKVDEQKKKKSLEKVAEWLLKVPAKEELELENPPTHEDDEDSCSSASTLDL
VPQNDELNPKKDDRAKGLEEQVFGAVYKRRGNKVIEPLTAKERKNIKRVSKKSNLLHCEE
KQVENEISGDFYKPDVKEKPDGSVEQLKNLSESDKNQPEASPPKRRTRKNMQQLQVEPSE
QTDLKSEGREEKGGSRKARKSNSNRKKPTKEAESAVLLEFQNSETSPKPNERSEKVVVQI
ETYPSSEEQKTPVMSSARRSRRLQLFAEEDQENRSAKKLTEDTSDEAMDAVLPKSGNLPM
EAKRNGCIYEEDIGGIESAENSGRASLRQTEAEVPEAQTPPKAAADCPPSVVPNSTSPSL
PSVVGPTLDSEKQEMNYQHDSQQEISVNEAKRKVEESEDCRNDSELDTEQLLRTFKAAKR
KSFCLGEPNVKRSRGLDDAATSDAGSELSENVGEVLKVTGKLVCSDVIPPSDFPDQKKPD
QSVLEASDPNSKGSVQEDDAEYCPIRSSFSSGLSPNKVSRRDRDSPQSVVPQVIESGLCF
MAVERDAPRSSQVASSLKEIRDGVSNYPSFQDASLTPDILEIHKADLNASVSGEVSTPSS
VKMNPKKKRRTQKLDSSSESGSSDSKEEFPALAHIFGVSNRPQTEARDQEEMGETSRGEG
VCGETDGAEPLSRPPGSPSPDQVHSSQASVDLFGTPAECDAPENDAGISIESSEFSSEVP
VTQQKIEMQKELVRLEKLIALVSEVLQEKEGSPAREGLPSESDQGGKDRGPDVPKPLPND
QDPVQPSDREDFLDAEKRPSDDKVVAKQGSVSESAVNDSSCAALQVKGTKVRSSTPATKT
VINRDLPPDGQEDKENNSPPKDRPKPKLVLVTSGLGPNEQIMVKKFAKRLGGHVVPQVTP
EVTHVIMRTDDQLVCERTLKYFLGIAGRKWVVSFLWISECFKEKKLLEESSFEVRGDVVN
GPNHQGPLRARTTQDSDLLLKGYTICLKGPFTDMSTDDMQWMVELCGATVVKDPLLLDGK
QKSHHIIIVQPRANSSSSLYSSLSRKATVVSRGWLLDTVATYTLQKYSSYTV
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgacgactccaaaagcggaagatgtcagaaaggggatcgcagtcctgtgggaaactctt
cagtgtccaatttgcctggagctaatgactgcacccgtttctactaagtgtgatcatcag
ttttgcaaattttgtattacaaaacttttggacaactccaaaccaaacagagccacttgc
cctgtttgtaaatccaagataacaaagaggagcctgcaggaaagccctgggtttcagaga
cttgttgctggattgcaagacatgatccaggcatatgaacatgacaccagcacaaactac
tttactggactgccacaggaaaggatgaacgctaatatcacagatagagagacaagtaaa
catgctgctaatttatcatctggaaacacgtttggaactgatctgaacaatttggaaacc
acaggctgtgatgatcatcctcagtcatgctcctcaactgcagcagctctgaacggattc
gctcagctaatgggacttgaagactcggtttctgtaacggcagaaaacgaaggcctggat
ggccgcctgtgtgacatcccgccagcttctgacaggaagacgtccaactctgcagatcat
ttagagacagaaaatgttgggaaaaacgcctcatcgtcaagaagcaaaccagagaactct
gattgtttgaaacctactcaggaggaaactgttcaacagcctgtcaggaagtcctctagg
aagaaacaaaaaaaggaagtagatcccgaaaaggttgatgagcagaaaaagaagaagagt
ttagagaaagtcgccgaatggctcctgaaggttccagccaaagaagagctggagctggag
aacccccccacccatgaggatgacgaggacagctgttcgtctgcatcgacgctggatttg
gtgccgcagaacgatgaactgaatcctaagaaggacgatcgcgccaaaggcctcgaagaa
caggtttttggtgccgtctacaagcgtagagggaacaaagttatagagccgctaacggct
aaagaaagaaaaaacattaaaagagtttcaaagaaaagcaacctactccactgtgaagag
aaacaggttgaaaatgaaatcagcggggacttttataaaccagatgtaaaagaaaagcct
gatggaagtgttgaacagttaaaaaacttgtcagaaagcgacaaaaatcaaccagaagca
tcaccgccaaagagaaggactcgtaaaaatatgcaacagcttcaagttgaaccatcagag
caaaccgatttaaaatcagaaggtagagaggagaaaggcggcagtaggaaagcaagaaag
tctaattcaaatagaaagaaaccaactaaagaggctgaatctgctgttttattagaattt
cagaacagcgaaaccagtcctaaaccgaatgaaagatccgagaaagtcgtagttcaaatc
gagacttatcccagcagcgaggaacagaagactccagtcatgagcagtgccagaagaagc
agaagacttcagctttttgcggaggaggatcaggaaaatcgcagcgctaaaaagctaact
gaagataccagtgatgaagccatggatgcagtgctgcctaaaagtggaaacctaccaatg
gaagcgaaaagaaacggatgcatctatgaggaggatatcggagggatagaaagcgcagag
aacagtgggagagcctctttaagacaaactgaggcagaagttcccgaagcccaaactcct
cctaaagcggctgctgactgtcctccctctgtggttccaaactctacaagcccatccctt
ccatctgtggtaggtccgacgcttgacagcgagaagcaggagatgaattaccaacatgat
tctcagcaagaaatcagtgttaatgaggctaaacgtaaagtagaagaatccgaggattgc
aggaatgacagtgagctggacacagagcagctgctcaggacctttaaagctgctaaaagg
aaatccttctgtctcggggaaccaaacgtgaagagaagccgtggtttagatgatgcagcg
accagtgatgcaggctctgaattatctgaaaatgtcggcgaggttttaaaagttactgga
aagctggtttgcagtgatgtgattcctccttccgacttccccgaccagaaaaaacctgat
caatccgtgctggaagcttctgatcctaatagcaagggttcagtgcaggaggatgatgct
gaatactgtccaatcagaagtagcttcagcagtggtctcagtcctaacaaagtatcaagg
cgggacagagacagccctcagtctgtggtccctcaggtcatagagtctggcctctgcttc
atggctgtagagcgtgatgcaccaaggagctcacaggtcgccagtagtctgaaggagatc
agagatggtgtttccaactatccttcattccaagacgcctctttaaccccggacatttta
gagatccataaagcagatttgaacgccagtgttagcggagaggtcagcactccatcctct
gtcaagatgaacccgaagaagaagaggagaactcagaagctcgattcttcatctgagtca
ggaagcagtgactcaaaagaggagtttccagctctggctcacatctttggagtgtcaaat
cggccccaaaccgaggccagagatcaggaggaaatgggtgaaactagcagaggtgagggt
gtctgtggtgaaaccgatggagcagaaccactgagccgtcctcctggcagcccgagtcca
gaccaggtccactctagtcaggcgtctgtggacctgttcggcacaccagctgaatgtgat
gcccctgaaaatgatgcaggcatttccattgaatcctctgaattctcaagcgaagttcct
gttacacagcaaaagatagaaatgcagaaggagctggtgaggctggagaagctgattgcg
ttggtctcagaggtgcttcaggagaaagaaggcagccctgccagagaagggctgccttca
gagagcgatcagggcggtaaagacaggggcccagatgtccccaaacccctcccgaatgat
caggacccagtccagccttcagacagggaggattttttagatgcagaaaaaagaccatca
gatgataaagtagtggcaaagcagggcagcgtttcagagagcgctgtaaacgactcatct
tgtgcggcattgcaagtaaaaggcacaaaggtccggagttcgactcctgcaaccaaaacg
gttataaaccgtgatttaccgccagatggtcaagaagacaaagaaaacaacagtcctccg
aaagaccgacctaaacctaaacttgtcctggtgacgtctggactgggccccaatgagcag
ataatggtgaaaaagtttgccaagagacttggcggtcacgtcgttccacaggtcacgcca
gaggtcacccacgttataatgcgcacagatgaccagctggtatgtgagcgcactctgaaa
tatttccttggaatcgcgggcagaaagtgggtggtcagcttcctctggatttctgaatgt
ttcaaagagaagaagttgttggaagagagttcatttgaagtgagaggcgatgttgtgaat
ggacccaaccaccaagggcccttgagagctcgtaccacacaggacagtgatcttctcttg
aagggctacacaatctgcctcaagggaccttttacagacatgtccacagatgacatgcag
tggatggttgagttgtgtggagccacagttgttaaagatccacttcttcttgatggcaag
cagaaatcccaccatatcatcatcgttcagcccagggccaattcatcatcctccttgtac
agcagtctgtccaggaaggccacagtcgtgtcccgtggatggctgctggataccgtagca
acatacacactgcagaagtacagcagttacactgtgtga

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