Cyprinodon tularosa (White Sands pupfish): 119792398
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Entry
119792398 CDS
T07496
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ctul01009
]
119792398 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctul04040
]
119792398 (trpc5a)
Protein phosphatases and associated proteins [BR:
ctul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119792398 (trpc5a)
Ion channels [BR:
ctul04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119792398 (trpc5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
119792398
NCBI-ProteinID:
XP_038154947
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MNPMTQLYYKKAIYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPVFSLIYLLAPKSAV
GRFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTIVEWMILPWVLGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASEEPNNCKGIRCERQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSFWYLLMWLHNKLCRRGQPPGELSHKCENLREFTERHADSLIQNQHYQ
EVIRNLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRHYSSS
SETTRDDGAMVSEDDSEPGDCTAAGVGLQKTKSVTFSNPVEDDGRPAPTLGVSALVRSIS
GLTQIDKEEEGSLEDKVGWGEEEEEDGKPKSNGLKTAMMPQTSTNALPSPSSSFSSTLTS
SLARTRSHLQRLSGPSAKTDSFKRLSYLFSRSKRKAPPTPLPLQSPPSYTISDGLLRPLG
SHTHSDFGLSDVTRSDSHLNEVGRSADTTSYSPLRTNGRDSLLTLPLPPPCPCQSLHCAS
NISESSSRLLDSSEDVFQVEGIEGAGEGGIDRGGGGGMMMMGGWVGPCNDVLEDSCDVIE
DSVTTQL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaatgacacagctatactacaaaaaggcgatttattcgccgtatcgagaccga
atcccgcttcagattgtccgggctgaagtggagctgtctgctgaggagcgggcctacctc
accgctgtagagaaaggtgactatgcaggagtcaaacatgctcttcgcgaggcagaagtc
tactacaacatggacgttaactgtctggatccgctgggtcgcagcgctctcctcatcgcc
atcgagaacgagaatctggagatcatggagctcctgctggaccatggcatccacacaggt
gacgccttgctgtacgccatcaggaaggaggtagtgggcgccgtggagctgctgttatca
cacaggaggcccagcggggagaagcaggttccctccctgatgatggacagtcagttctca
gagttcacccctgatataactcccatcatgcttgctgctcacaccaacaactatgagatc
atcaaactacttgtccagcgcaaggtcaccatcccacggccgcaccagataagatgtgac
tgtgtagagtgtgtatccagctcagaggtcgacagccttcgccattcacggtctcggctc
aacatctacaaggctctggcatcaccctctctcattgcgttgtccagtgaagatccaatc
ctcactgcctttagactgggctgggaactaaaagaattgagcaaggtagagaatgagttt
cgtcaggaatatgaggagctgtctcagcaatgtaagcgttttgccaaggaccttctggat
caggccagaagttcaagagaactggaaaccatcctgaatcacagagataacgaccagagc
gaggagctggaccccaggcagtgccacgacttggccaagctgaaacttgccatcaaatat
caccaaaaggagtttgtagcgcagccaaactgtcagcagctgctggccactctttggtat
gacggcttcccgggctggaggaggcgacactgggccgtcaagctggtgacctgcttcatc
attggactgctctttccagttttctcactgatctacctgttggccccaaagagcgcagtt
ggacgcttcattaagaagcccttcatcaagttcatctgccacacagcatcctatcttacc
ttcctcttcctcctcctcctggcttcgcagcatatcgcccgcaccaacctgcacatgcag
ggacctccacccaccattgtggagtggatgattcttccatgggtgcttggcttcatctgg
gcagagatcaaggaaatgtgggatgggggattcacagagtacatacatgactggtggaac
ctgatggactttgccatgaactccctctacctggctaccatatcactgaagatagtggca
tacgttaagtataactcttctcgtccaagggaggagtgggagatgtggcacccgacgctg
atcgccgaggctctgtttgccatcgccaacatcttcagctcgctcagactcatctccctt
ttcacagccaactcccacctcgggcctctgcagatctctctggggaggatgctgctggac
atcctcaagtttctcttcatttactgtctggttctattggcatttgccaacggactcaac
cagctgtacttctactatgagacaaaggcatcagaagaaccaaacaactgtaagggcatc
cgctgcgaaaggcaaaacaacgcattctccacgttgtttgagactctccagtccctcttc
tggtccatatttggtctgctcaacctgtacgtcaccaacgtgaaagctcgccatgagttc
acagaattcgtcggggcgacgatgttcgggacatacaacgtcatctcactggtggttctg
ttaaacatgctcatcgccatgatgaacaactcctaccaactcatcgctgaccacgccgac
attgagtggaagtttgcccgcaccaagctgtggatgagttactttgacgagggcggcacg
ctgcctcctcccttcaacatcattcccagccctaagtccttctggtacctgctaatgtgg
ctccacaacaagctgtgcaggagaggccagccgcccggggaactctcacacaaatgcgag
aacctgcgagagttcacagagcgtcatgctgacagtctgatacaaaaccagcattaccag
gaagtgattcgaaacctggtgaagagatatgtggcggccatgatacggagcgccaaaaca
gatgaggggctgacagaggaaaactttaaggaattgaagcaggatatctccagtttccgc
tatgaagtgttggatctcctcggcaaccgacgtcctccccggcggcattactcttcctcc
agtgagacgacaagagacgatggtgcgatggtatcagaggatgatagtgagccaggtgac
tgtaccgcagcaggagttggactccagaagactaagagtgtcaccttctccaacccagtg
gaggacgacgggaggccagcaccgacgcttggtgtgtctgcgctggtgcgctccatttca
gggttgacacagatagacaaagaagaggaggggagtctagaggacaaagtgggatgggga
gaagaggaggaagaagatgggaaaccaaagagcaatgggctaaagacagctatgatgcca
cagacctccaccaatgctctcccctcgccgtcttcgtccttttcctcaacgttaacgtca
tcacttgctcgcacaagaagccacctgcagcgcctctcaggtccgagtgcaaagacagac
tcttttaagcgcctctcatacttgttttcccgttccaaacgcaaagctccaccaacacca
ctccctctccagtctccgccttcatacacaatttctgatggtcttctccgtcccctcggg
agccacactcactccgactttggactcagcgatgttacaagaagcgattctcacctgaat
gaggtgggtcgctcagcggacactacatcatactcaccgctcagaaccaatgggcgggac
tcccttctaacgctgcccctaccgcccccatgcccttgccaatccctgcactgtgcttcc
aacatttctgagtccagctcaagactcctggactccagtgaggacgttttccaggtggaa
ggcatagaaggagcaggagaaggtggcattgatcgaggaggtggaggggggatgatgatg
atgggagggtgggtagggccgtgcaacgatgtcttagaggacagctgtgatgtcatagag
gactctgtcaccacgcagctatag
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integrated database retrieval system
