Cyprinodon tularosa (White Sands pupfish): 119792808
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Entry
119792808 CDS
T07496
Name
(RefSeq) otoferlin-like isoform X1
KO
K19949
otoferlin
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119792808
Membrane trafficking [BR:
ctul04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119792808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FerB
dsrm_Ferlin
Ferlin_C
FerI
FerA
Motif
Other DBs
NCBI-GeneID:
119792808
NCBI-ProteinID:
XP_038155539
LinkDB
All DBs
Position
Unknown
AA seq
1797 aa
AA seq
DB search
MKRSKHRGQKEDKGGDEPAILETQNMDRNGMLMGGPDPDTVSLASVTAVTTNVSNKRSKP
DIKMEPSSGRPMDYQVSVTVIEARQLVGLNMDPMVCVEIGEEKKYTSMKESTNCPYYNEY
FVFDFHVPPDVMFDKILKVSVIHSKNLLRSGTLVGSFKMDVGTIYSQPEHQFYHKWALLS
DPDDITAGCKGYVKCDIAVVAKGDTIKTPHKANESDDDDIDGNLLLPEGVPAERQWARYY
LKIYRAEGLPRMNTSLMANVKKAFIGENKDLVDPYVQVLFAGQKGKTSVQKSCYEPIWNE
QVVFTEMFPPLCKRMKIQIRDSDKVNDVAIGTHFLDLKKISNDGDKGFLPTMGPAWVNMY
GSTRTYTLMDEYQELNEGLGEGVSFRARLLISLGVEILDPSSPDITSSTEVQVEGVPNIS
ETATGKVEDFFLFGSFLEATMIDRKIGDKPITFEVTIGYYGSENDGVIQPKTKEKKGGRD
GAEEETELIHNSSDEEIDDEGDLTLVSSTPPMKPVITDRNYFHLPYFERKPCIFIKSWWQ
DQRRRLYNANIIDNIAHKLEDGLNDVHEIIKTEKAYPERRLRGVLEELSQGCSQFLSLAN
KDHNQSGRTKLDRERLKLCLSEVEAIGQQAKSMRTQVKKSTVRDKLKLAQNFLTKLRFLA
DEPQHSVPDVFIWMISNGKRIAYARVPSKDILYSSIDEERGKDCGKVKTIFLRIPGKKGF
GPAGWTVQSKLEIYLWLGLNRQRKDYLNGLPNGFEENKLSKGPGLPSSPPISLTYMMKQI
FQLRVHMYQARSLFAADSTGLSDPFARVFFSTQSQVTEVLAETLCPTWDQLLVFENVELF
GEACELRDDPPIIVIELYDQDTVSVDCLDGKADFMGRTFAKPVVKMADEHYGPPRFPPQL
EYYQIYRGNCAAGEMLAAFELLQIGPNGKADLPPIDGPTDMDRGPILPVPLGIRPVLSKY
RIEVLFWGLRDLKRVNLAQVDRPRVDIECAGKGVQSALIPNYKKNPNFSTLVKWFEVDLP
ENELLHPPLNIRVVDCRAFGRYTLVGSNAVTSLRKFIYRGSDRQANNWSTTEEIIVVSME
TEPAFKKMDTVVKLDSCSEAVVKVEDDEKDEKGKKKKRKKGEEPEEEELDESMLDWWSKY
FASIETLTEALKAQEAALSDSEEKEDMDIADGGAEDSLVKSPKKGKGKKDKKRPAVDPFE
KKKPKLDELKVYPKELESEFDNFEDWLHTFSLFRGKGGDDDDQNVTDEDRIVGKFKGSLC
MYKMSDETQRDMNFDSNLGMFQNIPNNDPINVLVRIYVVRATDLHPADINGKADPYIAIK
LGKTEIKDKENYISKQLNPLFGKSFDVEVTFPMDSTLTVSIYDWDLVGTDDLIGETKLDL
ENRFYSKHRATCGISSSYAIHGYNVWRDPMKPTQILAKLCKDGKLDGPHYGPEGRVKVEN
RVFMAPTEIEDENGLKKKTDEHLALSVLRHWEEIPKAGCKLVPEHVETRPLLHPDKPGIE
QGRIEMWVDMFPKDKTAPGPALDISPRKPKKFELRVIIWNTDEVVLEDDDIFTGEKSSDI
FVRGWLKGQQEDKQDTDVHYHSITGEGNFNWRFIYPFDYLVAEEKIVISKKESMFAWDET
EYKIPPRLNLQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCTIEMVTNEAEMPLVSI
FKQKRIKGWWPFVARNEEDEFELTGKVEAELHLLTGEEAEKSPAGEGRNEPEPLEKPNRP
DVALLWFLIPLKAAKHLVCDQYRWLTIKIVTALLLLAILALFLYNMPGYMVKKMLGA
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagtaagcatcgtggacaaaaggaggacaaaggcggagatgaaccagcaata
ttagagacacagaacatggatcgtaatgggatgctaatgggaggtccagacccggacacc
gtctctttggcctcagtcacagctgtcacaaccaatgtatcgaacaaaagatcaaagccg
gacatcaagatggagcccagttctggacgaccaatggactaccaggtcagtgtgacagtg
attgaagccaggcagctggttggccttaacatggacccaatggtctgtgtggagattggg
gaagaaaaaaagtacacctctatgaaggagtcaactaactgcccttactacaatgaatat
tttgtgtttgacttccacgtccctccagatgtcatgttcgacaaaattctcaaagtgtct
gtcattcactccaaaaaccttctgcgaagtggaacgctggttgggtctttcaaaatggat
gttggcacaatctactcccagccagaacatcagttttaccacaaatgggcactgttatct
gatccggatgacattacagcaggctgtaaaggctacgttaaatgtgacattgcagtcgtg
gctaaaggagacaccatcaaaactccacacaaggccaacgagtctgatgatgatgacata
gatggaaacctgctgctgcctgagggtgttcctgcagagcgacagtgggctcgctattac
ttgaagatctacagagcagagggacttccaaggatgaacaccagcctcatggccaacgtc
aaaaaggctttcattggagaaaataaagacctggttgatccgtatgttcaagtactcttt
gcagggcagaaggggaaaacatcagtacaaaagagctgctatgagcccatctggaatgag
caagttgtttttacagaaatgttccctcctctgtgcaaacgcatgaagatccagatccgg
gactcagataaagtgaatgatgtggctattggaacacacttcttagatttgaagaaaatt
tccaatgatggagacaaaggcttccttcccacaatgggacctgcctgggtgaacatgtac
ggctccacccgcacctacaccctgatggatgagtaccaggagcttaatgaaggacttggg
gaaggtgtgtccttcagggcgcgtttgctcattagtctgggcgtggagatcctggacccc
tcctcacctgacatcaccagctccacagaggttcaggtggagggagtgcctaacatctct
gagactgctaccgggaaggttgaggatttcttcctctttgggtctttcctggaggctaca
atgattgatagaaaaatcggtgataagccaatcacctttgaggtcacaataggttactat
ggaagtgagaatgatggagtcatccaacctaaaacaaaggagaagaagggtggcagagat
ggtgctgaagaggaaacagaactgatacacaactccagcgacgaggagatcgatgatgag
ggagacctgactttggtgtcatctactccacctatgaaacctgttatcactgaccggaac
tatttccatctgccctattttgagaggaagccatgcattttcatcaaaagttggtggcag
gatcagcgaagaaggctgtacaacgccaacatcattgataacattgcacacaaactggag
gatggactgaacgatgtgcacgagatcatcaaaacagagaaagcctatcctgaacgtaga
ctgagaggtgttcttgaggaactcagccaaggatgcagtcagtttctttctctggcaaac
aaggatcacaatcagtctggcagaaccaaactcgacagagagaggctgaaactgtgcttg
tcagaagtggaggccattggtcaacaagctaagtccatgaggacacaggtgaaaaagagc
acagtcagggataaactcaagctagctcaaaacttccttacaaagcttcgctttctggct
gatgaacctcagcacagtgttcctgatgtcttcatttggatgataagtaacgggaagcgc
attgcttatgcacgtgttccttccaaggacatcctttattccagtatagatgaggaaaga
gggaaagattgtggtaaagtcaaaaccatcttcctcaggattcctggtaaaaaaggtttc
ggacctgctggctggacagtgcagtccaaattagagatctatctctggctgggtctgaac
aggcagcgcaaagactacctgaacgggctgcccaacgggtttgaggaaaataagttgtcc
aaggggcccggcctgccttcctcgccacccatcagcctaacctacatgatgaaacaaatc
ttccagctgagggttcatatgtaccaggctcgcagcctgtttgctgctgacagcacaggt
ctttctgatccctttgcaagagttttcttctcaacccaaagccaagttactgaggtgctg
gctgagacactctgccccacatgggaccagctgctggtgtttgagaatgtggagctgttt
ggtgaagcctgtgaactgagagatgatccaccaattatcgtcattgagctctatgatcag
gacacagtgagtgtggattgccttgatggtaaagccgacttcatgggcaggacgtttgct
aagcctgtggtcaagatggcagatgagcattacgggccgccgcgttttccaccccagctg
gagtactaccagatctaccgtgggaactgtgctgctggggaaatgcttgcagcctttgag
cttcttcagatcggccccaatggaaaagcagaccttcctcccatagatgggcctacagat
atggaccgtggtccaatcctcccagtgcctctggggattagaccagtgctcagcaagtac
agaattgaggttttgttctggggcttgagagacttgaagagggtgaacctcgcccaggtg
gatcggcctcgtgtggatattgagtgtgccggaaagggagttcagtcggcccttattccc
aactacaaaaagaaccctaacttcagcacccttgtcaagtggttcgaagtggatttacca
gagaacgaacttcttcaccctccgctgaacatccgtgtagtggactgcagagcctttggg
cgctacacattggttggctccaacgctgtcaccagtctgcgcaagttcatctataggggt
tcagacaggcaggccaacaactggtccactacagaggaaattattgtggtgagcatggaa
actgagcctgcctttaagaagatggatacagtggtaaaactggactcttgctccgaggct
gtggtcaaagtcgaggatgacgaaaaagatgagaagggcaaaaagaagaagaggaagaag
ggggaggagcctgaggaggaggagcttgatgagagcatgttggactggtggtccaaatat
tttgcctcgattgaaaccctaactgaggctctcaaggctcaagaggcagcgctgtcagat
tcagaagaaaaggaagacatggacattgctgatggtggagctgaagactctctagtgaaa
agccccaagaaaggaaaaggaaagaaagacaagaagagaccagctgtggatccgtttgag
aagaaaaagccaaagttggatgagcttaaggtgtatccaaaggaactggaaagtgaattt
gacaactttgaggactggctccacaccttttccctgtttagaggaaaggggggtgacgat
gacgaccaaaatgtcacagatgaggacaggattgttggaaagttcaagggttcgctgtgc
atgtacaaaatgtcagatgaaacacagagagacatgaactttgactccaatttaggaatg
tttcagaacattcctaacaatgatccgataaatgtccttgtccgcatttatgtagtcagg
gcgacagatctgcatccagcagatatcaatgggaaagctgacccctacatcgcaattaag
ctgggaaaaacagaaatcaaagataaggaaaactacatttccaaacagctgaaccccttg
tttggcaaatcctttgatgtggaagtgacgttccccatggattccactctaacagtgtca
atctatgactgggatctggtgggaacagatgatctgattggagaaacaaagttggatctg
gagaatcgtttctacagcaaacacagagccacatgtgggatttcatccagctatgcaatt
catggttacaatgtgtggcgagacccaatgaaacccactcaaatcctggctaagctgtgc
aaggatggaaaactggacggccctcactacggccccgaaggaagagtgaaggtggagaac
cgtgtcttcatggcgccaactgagatcgaggatgaaaacggtttgaagaagaagacggat
gaacacctggctctctctgtgctgaggcactgggaggaaattcctaaagccggctgcaaa
ctggtcccagagcatgtagaaaccagaccgctcctgcatccggataaaccaggaatcgaa
caaggaagaatagagatgtgggtggatatgttccccaaggataagactgcaccaggtcct
gctcttgacatttcaccacgaaaaccaaagaagtttgaactgagggtcatcatctggaac
acagatgaggttgttttagaggatgatgacatcttcactggcgagaaatcaagcgacatc
tttgtacgaggatggctgaaaggacagcaggaggacaaacaggacactgacgtccattac
cactccatcactggagagggcaacttcaactggcgctttatttacccgttcgactacctg
gtggctgaggagaagatagtcatctccaaaaaggagtcaatgtttgcctgggatgagaca
gagtataagatccctcctcgacttaatctccaagtgtgggacgctgaccacttctctgct
gatgattttctgggtgcgattgagctggacctaaaccgtttccctcgtggtgcaaagaca
gccaaacagtgcaccatcgaaatggtgacaaacgaagccgagatgcctctggtctccatc
ttcaagcagaagaggattaaaggctggtggccatttgtcgccagaaacgaagaagatgaa
tttgaacttactggtaaagtcgaagctgagctgcaccttctcacaggggaggaagcagag
aaaagcccagctggagagggacgcaatgagcctgaacctctggagaaacccaaccgccca
gatgtcgccctcctctggttcctcatcccactcaaagcagcaaagcacctggtgtgcgac
cagtacaggtggctgaccataaagatcgtcacggcgctcctgctgttggccatcttggcc
ctcttcctctacaatatgccaggatacatggtcaagaaaatgcttggagcttga
DBGET
integrated database retrieval system
