Chlamydia trachomatis B/TZ1A828/OT: CTB_1451
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Entry
CTB_1451 CDS
T01327
Symbol
dnlJ
Name
(GenBank) NAD-dependent DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ctz
Chlamydia trachomatis B/TZ1A828/OT
Pathway
ctz03030
DNA replication
ctz03410
Base excision repair
ctz03420
Nucleotide excision repair
ctz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CTB_1451 (dnlJ)
03410 Base excision repair
CTB_1451 (dnlJ)
03420 Nucleotide excision repair
CTB_1451 (dnlJ)
03430 Mismatch repair
CTB_1451 (dnlJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctz03032
]
CTB_1451 (dnlJ)
03400 DNA repair and recombination proteins [BR:
ctz03400
]
CTB_1451 (dnlJ)
Enzymes [BR:
ctz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CTB_1451 (dnlJ)
DNA replication proteins [BR:
ctz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CTB_1451 (dnlJ)
DNA repair and recombination proteins [BR:
ctz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CTB_1451 (dnlJ)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CTB_1451 (dnlJ)
MMR (mismatch excision repair)
DNA ligase
CTB_1451 (dnlJ)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CTB_1451 (dnlJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
HHH
HHH_3
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
Transposase_20
BRCT_2
Zn_ribbon_RlmA
Motif
Other DBs
NCBI-ProteinID:
CAX09699
LinkDB
All DBs
Position
164180..166171
Genome browser
AA seq
663 aa
AA seq
DB search
MGAVSRDDYIALCAELVEHDRRYYVLNQPTISDYSYDVKMRELQEIEVQHPEWKVSWSPT
MYLGDRPSGQFPVVPHSSPMLSIANVYSLQELEEFFSRTEKLLGYSPGYSLELKIDGIAV
AIRYEKRLFAQALSRGNGVKGEDITANVSTIRSLPMRLPQEAPEDLEVRGEVFLSYEAFE
ELNACQREQGKLEFANPRNAAGGTLKLLSFKEAAKRKLDLSVYGLITDQKKRSHFENLQL
CSQWGFFVAGMPKQCRSRQEVVERIREIEEMRAALPMAIDGVVIKVDNIAHQDRLGLTSK
HYRWAIAYKYAPERAETILEDIVVQVGKTGILTPVAELAPVFLSGSRVSRASLYNQDEIE
KKDIRIGDSVYVEKGGEVIPKIVGINLAKRSLESGPWKMPSLCPVCHEPVVKEKVSVRCI
NPLCSGGMLEKICFFASKSALNIDHLGEKVVTKLFEVGLISSCSDIFALTEEDLKQVPGF
KDRSIQNLLASIAGAKKVALDRLLTALSIPFVGSSGAIALADHFGTLDKVIEASLDELMS
IEGIGPKVAASIVAFFSKHENREEIRRMQELGVQVLSKQSDKEAPLQGKVFVFTGTLQQM
TRTQAEERIRSLGGKVSSSVSKSTYAVIAGSEAGGKLKKAQDLGLSIWNESELLRILDAK
SVS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgtatctcgagatgattatattgctttatgcgcagaattagtggaacatgac
cgacgctattatgtgctcaatcaaccgacgatttctgattacagctatgatgtgaaaatg
cgagagcttcaagaaatagaagttcagcatccggaatggaaggtttcatggtctcctacc
atgtatttgggggatcgtccttcaggacagtttcctgtggttcctcattctagccccatg
ttgtctatagcgaatgtatactcattgcaagagctagaggaatttttttcccgtacagaa
aaattattggggtactctcctggatattctttagaactcaaaattgatggaattgctgtc
gccattcggtacgagaagcgattgtttgctcaagctttgagtcgggggaatggggtaaaa
ggagaagatattacagctaatgttagtactatacgctctttacctatgagactccctcaa
gaggctcccgaggatctagaagtgcgaggagaagtgtttctttcatatgaagcgtttgaa
gagctcaatgcttgtcaacgggaacaagggaaactggaatttgctaatcctcgtaatgca
gctggaggaactcttaagcttttatcttttaaggaagctgctaagcgtaaattagacttg
tctgtttatgggttgatcacagatcaaaaaaaacgctcacattttgaaaatcttcagtta
tgctctcaatggggatttttcgttgcagggatgccgaaacaatgccgttcgagacaagag
gtggtagaacgtattcgagagatagaggagatgcgcgcagcgctcccgatggctatcgat
ggagtcgtcattaaagtagacaatattgcacaccaggatcggctgggtttgacgagcaaa
cattatcgttgggcgatagcttataaatatgctccggaaagagcagaaacgattttggag
gatattgtcgttcaagtagggaaaacgggtattcttactccggttgccgagttagctcct
gtttttttatctgggagccgcgtgtccagagcatccttatacaaccaggatgagattgaa
aaaaaagatattcgcatcggagattcggtgtatgtcgaaaaaggaggagaggttattccc
aaaattgttgggattaatttggctaagcgttcattagagagcgggccttggaaaatgcca
agcctgtgtcctgtatgtcatgaacctgttgttaaagagaaggtgtcggtgcgttgtatc
aatccactttgttcaggggggatgctagaaaagatctgtttctttgcaagtaagagcgct
ttaaacatagatcatttgggagagaaggtcgtaactaaattattcgaagtaggtctcatt
agttcttgttcggatatatttgctcttacagaagaagatttgaaacaggtccctgggttt
aaagatcgttctatacagaatttattggcaagcattgccggagccaaaaaggtggcatta
gatcggcttttaacggctctttctattccttttgtggggagctctggtgccatagctctg
gcagaccacttcggaactctggacaaagtaatcgaagcttctttagatgagctgatgtct
atagaggggattggtcctaaggtagctgcatcgatcgtcgcgttcttctcgaaacatgag
aatagagaggaaattcgtcggatgcaagagctaggagttcaggttctttctaagcaatcc
gataaagaggctcctttacaaggaaaagtgtttgtttttacggggactctccaacaaatg
acgagaacgcaagcagaggagcgtatccgctccctaggggggaaagtgagctcttcggta
tcgaagagcacatatgccgtcatagcgggtagcgaagctgggggtaaattgaaaaaagct
caagatttaggtttaagtatttggaacgagagcgaattattaagaattcttgacgcaaaa
tcggtctcctga
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integrated database retrieval system
