Cuculus canorus (common cuckoo): 104054567
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Entry
104054567 CDS
T08597
Symbol
RAPGEF4
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04081
Hormone signaling
cuca04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
104054567 (RAPGEF4)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
104054567 (RAPGEF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104054567 (RAPGEF4)
Membrane trafficking [BR:
cuca04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
104054567 (RAPGEF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
Motif
Other DBs
NCBI-GeneID:
104054567
NCBI-ProteinID:
XP_053926000
LinkDB
All DBs
Position
6:22885502..23038754
Genome browser
AA seq
1026 aa
AA seq
DB search
MVAAHTSHSSSSGEWIACLDKRPLERSSEDVDIIFTRLKEVKAFEKFHPNLLQQICLCGY
YENLEKGVTLFRQGDIGTNWYAVLTGSLDVKVSDTSNHQDAVTICTLGIGTAFGESILDN
TPRHATIVTREYSELLRIEQKDFKALWEKYRQYMSGLLTPPYGVMETGSNNDRMPDKDSM
SSSALCQVSKNCNKTPLIEPHIPHRPTKTITQVPSEKILRAGKILRNTILSRAPHMIRDR
KYHLKTYRQCCVGTELVDWMMQQSPCVHSRTQAVGMWQVLVEEGVLNHVDQEHHFQDKYL
FYRFLDDEREDAPLPTEEEKKECDEEIQDTMLLLSQIGPDAHMRMILRKPPGQRTVDDLE
IIYEELLHIKALSHLSTTVKRELAGVLIFESHPKAGTVLFNQGEEGTSWYIILKGSVNVV
IYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTV
RLKEHDQDVLVLEKIPAGNRVSNQGNSQPQHKYIVMSGTPEKILEHFLETMRLDTTLNEA
TDSGLNDFIMMHCVFMPNIQLCPALMAHYHAQPSQGTEQEKMDYALNNKRRVIRLVLQWA
ALYGDLLQEDEAAMAFLEEFYVSVSDDTRMIAALKEQLPELEKIVKQVSEEPKASQKKHK
VLLQLFNTNDDRAQKRLPIRGSDEVLFKVYCIDQTYTTIRVPVSSSVKEVISAVADKLGS
GEGLIIVKMSSGGEKVVLKPHDVSVFTTLTVNGRLFACPRDQFDSLTPLPEQEGPSTGTV
GTFELMSSKDLAHQMTIYDWELFNCMHELELIYHTFGRHNFKKTTANLDLFLRRFNEIQF
WVVTEICLCSQLSKRVQLLKKYIKIAAHCKEYKNLNSFFAIIMGLSNVAVSRLSLTWEKL
PSKFKKIYAEFESLMDPSRNHRAYRLTVAKLEPPIIPFMPLLIKDMTFTHEGNKTFTDNL
VNFEKMRMIANTVRTVKFCRSQSFNPDAALTNKNHQDVRSYVRQLNVIDNQRTLSQMSHR
LEPRRA
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccgctcacacctcgcattcctcgtcctccggcgagtggatcgcctgtctggat
aaaagacctttggaacgttccagtgaagatgtagatataatattcacgcgactgaaagaa
gtgaaagcttttgagaaatttcatccaaaccttctccagcagatatgtctctgtggatat
tatgaaaatctggaaaaaggagtcacattgttccgtcagggtgatattgggacgaactgg
tatgccgttctgacaggatcactggatgtgaaggtttctgatacaagcaatcaccaggat
gctgtgacaatatgcactctgggaataggaactgcttttggagagtccattcttgataac
actcctcgccatgctaccatcgttaccagagaatatagtgagctccttcgaattgagcag
aaggacttcaaagcactttgggagaaatatcgacagtatatgtctggacttctcactcct
ccttatggtgttatggaaactggctccaacaatgacagaatgccagataaggacagtatg
tcaagcagtgctctctgccaagtttctaaaaattgtaataagacacctcttattgaacct
cacatcccacatcgtcctactaaaaccattacacaggttccttcagaaaagatcctcaga
gctggaaagattttgcggaatacaattctgtcccgagcccctcacatgataagagatcgt
aaataccatctgaagacttacaggcaatgctgtgtggggacagaactagttgactggatg
atgcagcaaagtccttgtgtccattcacgaacccaggctgttggcatgtggcaagtattg
gtggaagaaggtgttcttaaccatgtggatcaagaacaccactttcaagacaaatactta
ttttatcgatttttggatgatgagcgtgaagatgctcctctgccaactgaggaagagaaa
aaggagtgtgatgaggagatacaggacactatgctgcttctgtctcagatcgggccagat
gctcatatgaggatgattctcagaaaacctcctggccagagaactgtagatgacttagaa
attatatatgaagaacttcttcacattaaggccttatctcatctttctaccacagtaaag
cgagaattagcaggtgtcctcatttttgagtcacatcccaaagcaggaacagtcttgttt
aatcagggagaagaaggtacttcttggtacattatcctaaagggatcagtaaacgtagtc
atttatggcaagggtgtggtatgtactctacacgaaggagatgattttggcaagttagcg
cttgtgaatgatgctcccagagcagcatccattgttctgcgtgaagacaactgccacttc
ttgagagtagacaaggaggacttcaacaggatccttagggatgtagaagcaaatacagta
agactcaaagaacatgaccaagatgtcttggtgttggagaagatcccagcaggaaacaga
gtttctaaccaaggaaattcacagcctcagcacaagtatattgtgatgtcaggaactcca
gagaaaattttagagcactttctagaaactatgcgccttgacactactttaaatgaagca
acagattctggtttaaatgattttattatgatgcactgtgtttttatgccaaatattcag
ctctgcccagccttgatggcacactatcatgcccagccttcccagggtacagagcaggag
aaaatggattatgccctcaacaataaaaggcgagtcattcgactggttctgcagtgggct
gctttatatggagatttactacaagaagatgaagcagcaatggcctttttggaggaattt
tacgtatctgtatcagatgatactagaatgattgcagcactaaaggagcaacttccagag
ctagagaaaattgtaaaacaagtttctgaagaacctaaagcatcacaaaagaagcacaaa
gttcttctgcagctgttcaatacaaatgatgacagagcacagaaacgcctgcctattaga
ggcagtgatgaagttctttttaaggtgtactgcatagaccaaacctataccactatccgg
gtgccagtgtcttcctccgtgaaagaagtgatcagcgcagtagcagataagctgggttct
ggagaaggcctcatcatagtgaagatgagttcaggaggagaaaaggttgttctcaaacct
catgatgtttctgtgtttacaactctcactgttaatggacggctgtttgcttgcccacgc
gatcagtttgattcattgacaccattgccagaacaagaaggaccatctactggtacagtg
ggaacatttgaactgatgagctccaaagacctagcacatcagatgacaatttatgactgg
gagctcttcaactgcatgcatgagctggaattgatctatcacacttttggaaggcacaat
tttaaaaagaccacagcaaatctggacttgtttttaagaagatttaatgaaattcagttc
tgggtcgtcactgagatttgtctttgctctcaactcagcaagcgtgttcagctgttaaag
aagtatattaagatagcagcccactgtaaagaatataaaaacctgaattcctttttcgct
attattatgggactgagtaatgttgctgtgagccgtctctcgttaacgtgggagaaactt
ccaagcaagttcaagaagatctatgcagagtttgaaagcttaatggatccatcaagaaac
catagggcctacagactaactgtagctaaattggaacctccaataattcctttcatgcca
ctacttataaaagacatgacgtttactcatgagggaaacaagacattcaccgacaatctg
gtaaacttcgaaaaaatgcgcatgattgccaacactgtcaggacggtgaaattctgccga
agccaatctttcaaccccgacgcagccctaactaataagaaccatcaggatgttcggagc
tatgtgcggcaattaaatgtgattgacaaccagagaactttatcacagatgtctcaccga
ctagaaccgcgtcgagcataa
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