Cuculus canorus (common cuckoo): 104055728
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Entry
104055728 CDS
T08597
Symbol
FBN1
Name
(RefSeq) fibrillin-1
KO
K06825
fibrillin 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04350
TGF-beta signaling pathway
cuca04518
Integrin signaling
cuca04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
104055728 (FBN1)
09133 Signaling molecules and interaction
04518 Integrin signaling
104055728 (FBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104055728 (FBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cuca00536
]
104055728 (FBN1)
Glycosaminoglycan binding proteins [BR:
cuca00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104055728 (FBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
hEGF
FXa_inhibition
EGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_PEAR1L
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
104055728
NCBI-ProteinID:
XP_053933516
LinkDB
All DBs
Position
12
Genome browser
AA seq
2866 aa
AA seq
DB search
MWRGRLLGLALGVAVLWASQAGAAEGGSARESRASRAKRRGQGGGHDALKGPNVCGSRYN
AYCCPGWKTLPGGNQCIVPICRHSCGDGFCSRPNMCTCPNGQIAPSCGSKSIQHCNIRCM
NGGSCSDDHCLCQKGYTGTHCGQPVCENGCLNGGRCVAPNRCACTYGFTGPQCERDYRTG
PCFTLITNQMCQGQLSGIVCTKTLCCATVGRAWGHPCEMCPAQPHPCRRGFIPNIRTGAC
QDVDECQAIPGICQGGNCINTVGSFECKCPAGHKFNEVTQKCDDIDECSTVPGICDGGEC
SNTVGSYFCKCPPGFYTAPDGLKCIDVRPGYCYSSLTNGRCSNQLPQPLSKMQCCCDSGR
CWSSSPATAPEMCPIRSTDEYRKLCTVAALLPARPDLPPGRPDLPPGRPDIIPPPHIPGV
YPPQQPEIVYPSRVPPPHVILPVNFTDYCQLFRHLCLNGRCVPTPGSYRCECNKGFQLDV
RGECIDVDECEKSPCISGDCVNTQGSYICQCRVGYQSTATRTECRDIDECLQNGRICNNG
RCINTDGSFHCVCNAGFQVAADGKNCEDMDECSIRNMCLNGMCINEDGSFKCICKPGFQL
ASDGRYCRDIDECETAGICMNGRCVNTDGSFRCECFPGLAVGLDGRVCVDTHMRSTCYGG
YKRGQCVRPLTGAVTKSECCCASTDYAFGEPCQPCPAQNSAEYQALCSSGTGMTAGGNDI
NECLLDTDLCPNGRCENLHGTYKCLCDAGYEVDSTGKNCIDIDECALNMLLCDNGQCRNT
PGSFTCTCPKGFVYTPDLKTCEDIDECESNPCVNGVCKNTAGSFVCECSPESTLDTTKTI
CIETVKGTCWQNIVNGRCEININGATLKSQCCSSLGAAWGSPCTPCERDPICQRGYSRIR
GTLCEDVNECEVFPGVCTNGQCVNTLGSFVCQCPNGMTLDASGRTCLDIRLESCYLQHED
EQCTAQIPGRHRMDACCCSVGAAWGFECEECPLKGSPEFEALCPRGSGFSTKIEITGKPF
SKDINECKMVPSLCTHGKCRNTIGSFKCRCDSGFALDSEERNCTDIDECRISPDLCGQGI
CVNTPGDFECECFEGYESGFMMMKNCMDIDECQRNPLLCRGGTCINTEGSFRCDCPPGHQ
ISPNISACIDINECELSTNLCRNGRCVNLIGKYQCACNPGYQSTPDKLYCVDIDECSIMN
GGCENFCTNSEGSYECSCKQGFALMPDHRTCTDIDECEDNPNICDGGQCTNIPGEYRCLC
YDGFMASEDMKTCIDVNECDLHPNICLSGTCENTKGSFICHCDMGYSGKKGTTGCTDINE
CEIGAHNCDRHAICTNTAGSFKCSCSPGWVGDGIKCTDLDECSNGTHMCSPHADCKNTMG
SYRCLCKEGYTGDGFTCTDLDECSENLNLCENGQCLNAPGGYRCECDMGFLPSPDGKACE
DIDECSLPNICVYGTCHNLPGLFRCECEVGYELDRSGGNCTDVNECADPTTCISGTCINT
AGSYTCECPPDFELNPTRVGCVDTRSGNCYLDIKTRGDNGGTFCSNEIGVGVSKASCCCS
LGKAWGVPCEHCPLVNTTEYKVLCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINT
FGSFQCQCPSGYYLNEETRVCDDVNECDTPGICGPGTCYNTVGNYTCICPPDYMQVNGGN
NCMDMRRSLCYRNYYADNQTCDGELLFNMTKKMCCCSYNIGRAWNKPCEQCPIPSTDEFS
TLCGSQRPGFFIDIYTGLPVDIDECREIPGVCENGICINMVGSFRCECPVGFFYNDKLLI
CEDIDECQNGPVCQQNAECVNTAGSYRCDCKPGYRFTSTGRCVDRNECQEIPNICSHGQC
IDTVGSFYCICHNGFKTNDDRTMCIDINECERDACGNGTCRNTIGSFNCRCNLGFILSHN
NDCIDVDECASGNGMLCRNGQCVNTIGSFQCLCNDGYEVALDGRTCMDVNECALDPGKCS
PGTCQNLDGSFRCICPPGYVLQNDKCEDIDECVEQPEICALGTCSNTPGSFKCLCPEGFV
LSSTGRRCQDLRVSYCFTKFEDGKCSVPKSRNHSKQECCCALKGQGWGDPCELCPEEADE
AFRQICPFGIGILVGPGDARLDVDECLDPDNCKFGQCINTDGSFRCECPYGYILEGAQCV
DTDECAVGNPCGNGTCRNVVGGFECTCVEGFEPGPMMTCEDVNECIQNPLLCAFRCVNTF
GSYECKCPAGYVLREDRRMCRDQNECEEGIHDCDSKQMECKNLIGTYMCICGPGYQRRPD
GEGCMDENECQTKPGLCENGRCVNTVGSYRCECNEGFTVSDAQNECLDNREGYCFTEVLQ
SMCQIGSSNRNAVTKSECCCDGGRGWGQNCEVCPFPGTVAFKKLCPHGRGYTSNGADIDE
CKVIHDVCRNGECINERGSYRCHCNLGYTTDITGTLCIDLNECNESPKPCNFICKNTEGS
FQCSCPKGYILQEDGRSCKDLDECATKQHNCQFLCVNTIGGFTCKCPPGFTQHHTACIDN
NECATEINLCGPKGICQNTPGSFVCECQRGFSLDQTGLSCEDVDECDGNHRCQHGCQNII
GGYRCSCPQGYLQHYQWNQCVDENECLSAHICGGASCHNTLGSYKCMCPTGFQYEQFSGG
CQDINECGSAQAPCSYGCSNTEGGYVCGCPPGYFRIGQGHCVSGVGLGKGQGQELSLSGE
VDDNSLSPEACYECKINGYHKRGRKRRSTNETANETEDQQELEPPISLASWDVEKAAVFS
INISDLSNKDRILELLPALTTLTNHNRYLIDSGNEDGFFRINKKDGISYLHFTKKKPVPG
NYSLQISSIPLYKKKELNQLEEKHDKDYLSGELGDNLKMKIQILLH
NT seq
8601 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgggggcggctgctggggctcgccctgggggttgcggtgctttgggcatcccag
gcgggcgctgccgagggggggagcgccagggagagccgagccagccgggccaagcggcga
gggcagggcggcgggcacgatgcgctcaaaggaccaaatgtgtgtggatcacgttacaat
gcttactgttgccctggatggaaaactttacctggtggaaaccaatgcatagtccctatc
tgcagacattcctgtggggatggattttgctctagaccaaacatgtgcacatgcccaaat
ggtcagatagccccctcctgtggttcaaaatcaatacaacactgtaacatccggtgcatg
aacggaggtagctgcagtgacgaccattgcctctgtcagaagggatatacaggaacacac
tgtggacagcccgtctgtgaaaacggatgtctgaatggaggaagatgtgtggctccgaac
cgatgtgcttgcacatatggctttactggaccccagtgtgaaagagattacaggaccggc
ccttgcttcactttgataaccaaccagatgtgccagggacagctgagtggaatcgtctgc
acaaaaaccctttgctgtgccacagtcgggagagcgtggggtcacccctgtgagatgtgt
cctgcccagccgcatccctgccgcaggggtttcattccaaacattcgaaccggggcctgt
caagatgtggatgaatgccaagccatccctgggatctgtcaagggggaaattgcattaat
actgttggatcttttgagtgcaaatgcccagctggacacaagtttaatgaagtgacacaa
aaatgtgatgatattgatgaatgcagcaccgttcctggaatctgtgatggaggagagtgt
tcaaacactgttggcagttacttctgcaagtgtccgccagggttttatacagctcctgat
ggcttgaagtgcatagatgtgcgtcctggatactgctactcttctctgaccaacggacgc
tgcagtaatcagcttccccaacctttgtccaaaatgcagtgttgctgtgacagtggccga
tgctggtcttccagtccagccaccgctcctgaaatgtgccccatcagatccaccgatgag
tatcgcaaactgtgcacagtagctgctctgctgccggcaagacctgaccttccaccgggc
cgacccgaccttcctccaggccgtcctgatatcatccctccaccacacattcctggtgtt
tatcctcctcaacagccagaaattgtttatccatctcgggttccaccacctcatgtgatc
ttgccggtgaacttcaccgactattgccaactgttccgacatctctgccttaatggacgc
tgtgttcctactcctgggagctaccgctgcgagtgcaacaaaggattccaactggatgtt
agaggggaatgcattgatgttgatgaatgtgagaagagtccgtgcatcagtggagactgt
gtgaacacccagggatcttacatatgccagtgtcgtgtcggctatcagagcacagcaact
agaacagagtgccgagacattgatgaatgtttacagaacggtcgtatctgtaataatgga
cgatgcatcaatacagatggcagttttcactgcgtgtgtaatgctggcttccaagtggca
gctgatgggaaaaactgtgaagatatggatgaatgcagcataaggaacatgtgcctcaac
gggatgtgcatcaatgaagatggcagttttaaatgcatttgtaaaccagggttccagtta
gcatctgatggacgctattgcagagacatcgatgagtgtgagacagctggaatatgcatg
aacggacgctgtgtgaacactgatggctctttcagatgtgaatgcttccctggccttgca
gtgggactggacggacgtgtgtgtgttgatacacatatgcgaagcacatgctacggtggc
tacaagagaggacaatgcgtgagaccattaaccggcgcagttacaaaatcagagtgctgt
tgtgccagtactgactatgcctttggggagccttgtcagccctgcccagcgcaaaattca
gctgaatatcaggctctgtgcagcagtggaactggcatgactgcgggaggaaatgatatt
aacgagtgcttactggatactgatctctgtcctaatggaaggtgtgagaacctgcatgga
acatacaaatgtttatgtgacgctggatatgaagtggattcaactgggaaaaactgcatc
gacattgatgaatgtgcactgaacatgctgctttgtgacaatgggcaatgcagaaatacc
cctggaagcttcacctgcacttgtccgaaaggatttgtatacactcctgacctaaagacg
tgtgaagatattgacgagtgcgaatctaacccctgcgttaatggggtgtgcaaaaacaca
gcaggctcttttgtttgcgaatgttctcctgaaagtactttggatacaaccaaaaccatc
tgcatagaaactgttaagggtacctgttggcagaacatagtgaacggaagatgtgaaata
aatatcaacggagcaactctgaagtcccagtgctgttcctcactgggtgctgcttgggga
agcccgtgtacaccatgtgaacgagacccaatatgtcaaaggggatattcaagaataaga
ggaacattgtgtgaagatgtaaatgaatgtgaggtgtttcctggagtctgtacaaatggg
caatgtgtcaataccttgggatcgtttgtttgccagtgccccaatggaatgactttagat
gcttctggacggacatgtcttgacattcgcttggagagttgctacctgcagcatgaagat
gagcaatgcaccgcacaaataccaggccggcaccgaatggatgcttgctgctgttcagtg
ggggcagcgtggggatttgagtgtgaggagtgtcctctgaagggatcacctgaatttgaa
gctctttgtccaagaggatctggtttctctacgaagatagagataactgggaaacctttc
tctaaagatatcaatgaatgtaaaatggtccccagtctttgtacccatggaaaatgcaga
aacaccattggcagttttaagtgtagatgtgacagtggatttgcccttgattctgaagaa
aggaattgcacagacattgatgaatgccgcatctctcctgatctttgtggccaaggcatc
tgtgtcaatactcctggagattttgaatgcgaatgttttgaaggctatgaaagtggattt
atgatgatgaaaaactgcatggacattgatgagtgccagcgcaacccccttctctgccga
ggtggcacctgcatcaacacagagggaagttttcgatgcgattgtcctccaggccatcag
atatcaccaaatatctctgcgtgtatagacattaatgaatgtgaattaagcaccaacttg
tgccgaaatgggcgttgtgtcaacctcattggaaagtatcagtgtgcttgcaaccctgga
tatcagtccacacctgacaagttatactgtgttgatatcgatgagtgcagtataatgaac
ggtggctgtgagaacttctgtacaaactcagagggcagctatgaatgtagctgtaaacaa
ggctttgcactcatgccagaccacaggacatgcactgatatcgatgagtgtgaagacaat
cctaacatctgtgatggagggcagtgtacgaacatcccaggagaatacaggtgtctttgc
tatgatggatttatggcatctgaagacatgaagacttgcatagatgttaacgagtgtgat
ctgcatccaaacatctgtctcagtggaacctgtgagaatacaaagggctcatttatctgt
cactgtgatatgggatattcaggcaagaaaggcacaactggttgcacagatatcaatgag
tgtgaaattggagcccataattgcgatagacacgccatatgtacaaacacagcaggaagt
ttcaaatgtagctgcagccctggctgggttggagatggtatcaagtgcacagatctggat
gagtgctccaatggaacccacatgtgcagtccacatgctgactgcaagaatacaatggga
tcttaccgctgcctgtgtaaagaaggttatactggagatggcttcacttgcacagacctc
gatgaatgctcagaaaacttgaatctctgtgagaatgggcagtgcctcaatgcccctgga
ggataccgctgtgaatgtgatatgggttttttgccaagtccagatgggaaagcatgtgaa
gatattgacgagtgctcacttcctaacatctgtgtctacggtacttgtcataatctccct
ggacttttccgatgcgagtgtgaagtgggctacgagttggatagaagtggtggtaactgc
acagacgttaacgaatgtgcagatcccacaacctgcattagtggcacgtgtatcaatact
gctggtagttacacctgtgagtgccctcctgattttgaactgaatcccacccgagttgga
tgtgttgatactcgatctggcaactgttacttggacattaaaactcgtggagataacggt
ggcaccttctgcagcaatgagatcggagtgggtgtttccaaggcctcctgttgctgctcc
ctgggcaaagcttggggagttccctgtgagcattgcccacttgtgaacacaactgaatat
aaggttctttgccctggaggggaaggattccgaccaaaccctattacagttatattagaa
gatattgatgaatgtcaagaactgcctggactttgccaaggaggaaaatgcattaatacg
tttggtagcttccagtgtcagtgtccatcagggtactatttgaatgaagagactcgagtg
tgcgatgatgtgaatgagtgtgatacacctggcatttgtggacctggcacatgctacaat
actgttgggaactacacctgcatctgtcctcctgattacatgcaggtcaatggaggaaac
aactgtatggatatgagaagaagtctgtgttacagaaattactatgctgacaatcaaacc
tgtgatggtgagctgctctttaatatgaccaagaaaatgtgctgctgttcctacaatatt
ggacgtgcgtggaataagccttgtgaacagtgtcccatcccaagcactgatgaattctcc
acactctgtggaagccaaaggcctggcttcttcattgacatttatacaggattaccagtc
gatattgatgaatgcagagagattcctggagtgtgtgaaaatggaatctgtataaacatg
gttggcagcttccgatgcgagtgccctgtgggtttcttctacaatgacaagctactgatc
tgtgaagatattgatgaatgccaaaatggaccggtgtgtcagcaaaatgcagaatgtgtc
aacacagctggtagctaccgttgcgactgtaaacctggctacaggtttacatcaactggc
cgctgcgtagatcggaatgaatgtcaagaaattcccaatatctgcagccacgggcagtgt
attgacactgttggaagcttctactgcatttgtcacaatggattcaagaccaatgatgac
agaacaatgtgtatagatattaatgagtgcgagagagatgcgtgcgggaacggaacctgc
agaaataccattggctctttcaactgccgctgcaatttggggttcatcctctcacacaac
aatgactgcatagatgtggacgagtgtgcaagtggaaatggaatgctctgcaggaatggt
cagtgcgtaaacacgattgggtccttccaatgtctttgcaatgatggctatgaggtggct
ctggatggaaggacttgcatggatgtcaatgagtgtgcactggatcctggaaaatgttca
ccaggcacatgtcagaacttggatgggtcgttcagatgtatttgtcctcctggatatgtc
ctgcagaatgacaaatgtgaagacattgatgagtgtgtggaacagccagaaatttgtgcc
ctgggcacatgtagcaacactccaggcagtttcaaatgtctctgtccagaaggctttgtg
ttgtcttccacaggaaggcgatgccaagatctgagagtaagttattgcttcaccaaattt
gaagatggaaagtgttctgtgccaaagtcccgaaaccactccaaacaagagtgctgctgc
gccttaaagggacagggatggggagatccctgtgaactctgcccagaggaagcagatgag
gcattcagacaaatttgtccgtttggaattggcatccttgttggacctggtgacgcaaga
ctggatgtggatgagtgccttgatccagacaactgtaaatttgggcagtgtatcaacaca
gatgggtcttttcgctgtgagtgtccatatggttacatcctggaaggagctcagtgtgtg
gatactgatgaatgtgccgttggaaacccatgtggaaatggaacttgcaggaatgtggtg
ggaggttttgaatgcacctgcgtcgagggatttgagcctggaccgatgatgacctgtgaa
gatgtcaacgagtgcatccagaaccctctgctctgtgctttccgctgcgtgaatactttc
ggatcgtacgaatgcaagtgccccgcagggtacgttctacgagaggatcggagaatgtgc
agagatcagaatgagtgtgaagaaggaattcacgattgtgactcaaaacagatggagtgc
aaaaacctaattggcacctatatgtgtatctgtggacccggttatcagcgccgtcccgat
ggggaaggctgtatggatgagaatgaatgtcagaccaaacctgggctttgtgagaatggt
cgttgtgtgaacacagtgggaagttacagatgtgaatgcaatgagggattcaccgtcagt
gacgcccagaatgaatgccttgacaacagggagggctactgcttcactgaagtcttacaa
agtatgtgtcaaatcggatcaagcaacaggaacgctgtcaccaagtctgaatgctgctgt
gatggtggccgaggctggggacaaaactgtgaggtctgccccttcccaggcaccgtagcc
ttcaagaagctatgtcctcatggccgaggatacacgtctaatggagcagatattgatgag
tgcaaagttattcatgatgtctgccgcaatggagaatgcatcaatgagagaggatcgtat
cgttgtcattgcaaccttggctatactacagacataacaggcactctttgcatagatctg
aatgaatgtaacgagtctccaaaaccttgcaatttcatttgcaaaaacacagaggggagc
ttccagtgttcatgtcctaaagggtacatcctgcaagaagatgggaggagctgcaaagat
cttgatgaatgtgcaacaaagcagcacaactgccagttcctttgtgtgaacactattggg
ggtttcacttgtaaatgtcctcctggattcactcagcaccatacagcctgcattgataat
aatgagtgtgctactgaaatcaatttatgtgggccaaagggaatttgccagaacacaccg
ggaagttttgtttgcgagtgtcaacgtggcttctcactggatcagactgggcttagctgt
gaagatgttgatgaatgtgatggaaaccaccggtgtcagcatggctgccaaaatataatt
ggaggatacagatgtagctgcccacaaggatatctccagcattaccaatggaaccaatgt
gttgatgaaaatgaatgtctcagtgcacacatttgtggaggagcatcttgccacaatact
ttgggaagctataaatgtatgtgccctaccggatttcagtatgaacagtttagtggaggt
tgccaagatatcaatgaatgcggttctgcacaagccccatgcagttatggttgttcaaat
actgaaggtggctacgtctgtggatgtccacctggttacttcagaataggacaaggacac
tgtgtttctggagtagggctaggcaaaggtcaaggacaagagctttcactcagcggagaa
gtagatgacaactccctctctccagaagcttgttatgaatgtaaaatcaatggctatcac
aagagaggaaggaagcgcagaagcactaatgaaactgcaaatgaaacagaggatcagcaa
gagctggagccgcccatcagtctcgccagctgggatgttgagaaagcagcagtcttctcc
atcaacatctcggatctcagtaacaaagatcgtatcctggaactgcttcctgccctcaca
acactgacaaaccacaaccgatatttaattgactccggaaatgaagatggtttctttaga
atcaataagaaggacggaataagttaccttcatttcacaaagaagaagccagtgcctgga
aactattcattacaaatcagtagtattccgctctataaaaagaaggaacttaaccagctt
gaagagaaacatgacaaagactacctcagtggtgagctgggagataacctgaaaatgaaa
attcagatattgcttcattaa
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integrated database retrieval system
