Cuculus canorus (common cuckoo): 104057729
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Entry
104057729 CDS
T08597
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04620
Toll-like receptor signaling pathway
cuca04621
NOD-like receptor signaling pathway
cuca04622
RIG-I-like receptor signaling pathway
cuca05164
Influenza A
cuca05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104057729 (TRAF3)
04621 NOD-like receptor signaling pathway
104057729 (TRAF3)
04622 RIG-I-like receptor signaling pathway
104057729 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104057729 (TRAF3)
05168 Herpes simplex virus 1 infection
104057729 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF3_RING
zf-TRAF
zf-C3HC4
Cast
MPS2
ATG16
zf-C3HC4_2
Sina_ZnF
Med28
FliJ
Spc29
KxDL
Tropomyosin
GAS
zf-RING_6
DUF1664
Crescentin
SPATA24
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
104057729
NCBI-ProteinID:
XP_053923438
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All DBs
Position
5:29906563..29978052
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AA seq
567 aa
AA seq
DB search
MDTSKKTEPPLSVEMVQQRANPDHGASASIYVPEHGGYKERFVNAVEDKYKCEKCHLILC
NPKQTECGHRFCETCMNALLSSSSPKCTACQEGIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLLHLKTDCQFEELPCPRADCKEKVLRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSLLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaagaagacagaacctcctttatctgtagaaatggtacagcaaagggcc
aatcctgatcacggtgcttcagcatcgatttatgttccagagcatggtggctacaaagag
agatttgtaaatgctgtggaagataagtataaatgtgaaaaatgtcacctcatcttatgc
aaccctaaacagactgaatgcggacacagattctgtgagacctgcatgaatgccttgctg
agttcttctagtccaaaatgtacagcatgtcaagaaggcatagtaaaagataaggtattt
aaagataattgttgcagaagagagctacttgcccttcaaatatactgcagaaatgaaaac
aagggctgtaaagaacaactctctttgggtcaattactgctgcatttgaaaactgattgt
cagtttgaagaacttccgtgtcctcgtgctgattgcaaagaaaaagtactgagaaaagat
ttgccagatcatgtagagaagacctgtaaataccgggagacaacctgtaaatactgtaaa
agccaagtcccgatgattatgttgcagaaacacgaagatacagactgcccgtgtgtaatg
gtttcatgtcctcataaatgtagtgttaaaacactcatgaggagtgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagaatggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtattcaaactttacataatcagatttgtagctttgaaatagaa
attgagagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcga
gtgatagacagtcaagcagagaaactgaaagaactggacaaagaaatccgtcccttccga
cagaactgggaggaagctgacagcatgaaaagcagtgtagaatccctccagaacagagtg
actgagctggaaagtgttgataaaactgcaggacaaggagctcgaaatacaagcctgcta
gagacacagctgagcaggcatgatcagatgctgagtgttcatgatattcggctggctgac
atggacctccgattccaagttctagaaactgccagttacaatggagtattaatttggaaa
attcgagattataaacgtcggaagcaagaggcagtcatggggaagactctgtccttgtac
agccaacccttttatactggatactttggctacaagatgtgtgccagagtttaccttaat
ggagatggcatgggaaaggggacgcacttgtcactctttttcgtcataatgcgtggagaa
tacgatgcattgcttccttggccgtttaaacagaaagtaactctcatgctaatggatcag
ggaccgtctcgacgccacttgggagatgctttcaagccagatccaaacagcagcagtttc
aagaagccaactggagaaatgaacattgcatctggctgcccagtctttgtggctcaaact
gttctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatcggatctaccagacccctga
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