Cuculus canorus (common cuckoo): 104059100 Help Entry 104059100         CDS       T08597                                  Symbol TRAF2 Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism cuca  Cuculus canorus (common cuckoo) Pathway cuca04010   MAPK signaling pathway cuca04137   Mitophagy - animal cuca04141   Protein processing in endoplasmic reticulum cuca04210   Apoptosis cuca04217   Necroptosis cuca04621   NOD-like receptor signaling pathway cuca04622   RIG-I-like receptor signaling pathway cuca04920   Adipocytokine signaling pathway cuca05132   Salmonella infection cuca05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:cuca00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     104059100 (TRAF2)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     104059100 (TRAF2)  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     104059100 (TRAF2)   09143 Cell growth and death    04210 Apoptosis     104059100 (TRAF2)    04217 Necroptosis     104059100 (TRAF2)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     104059100 (TRAF2)    04622 RIG-I-like receptor signaling pathway     104059100 (TRAF2)   09152 Endocrine system    04920 Adipocytokine signaling pathway     104059100 (TRAF2)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     104059100 (TRAF2)   09171 Infectious disease: bacterial    05132 Salmonella infection     104059100 (TRAF2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cuca03019]     104059100 (TRAF2)    04121 Ubiquitin system [BR:cuca04121]     104059100 (TRAF2) Enzymes [BR:cuca01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      104059100 (TRAF2) Messenger RNA biogenesis [BR:cuca03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      104059100 (TRAF2) Ubiquitin system [BR:cuca04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     104059100 (TRAF2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING Sina_ZnF zf-C3HC4_2 zf-C3HC4_5 zf-C3HC4_4 zf-TRAF_2 zf-RING_6 zf_C2HC_14 zf-RING_10 zf-RING_UBOX Motif Other DBs NCBI-GeneID:  104059100 NCBI-ProteinID:  XP_009558995 LinkDB All DBs Position Unknown AA seq 472 aa AA seqDB search MAAANSTPPGSLDLNQPGFPKEILGTKLEVKYLCSDCKNILRRPFQAQCGHRYCSYCLKR IISAGPQKCASCIQEGIYEEGISILETSSAFPDNAARREVESLPAICINSGCTWKGTIKE YEAHYEVCPEFPMTCEGCGKTVPRQKFRDHVKACGRSKVPCRFGVVGCTEVVENEKLLEH ESKCLAEHLYMLLSFVLSLKTGSEDLKPLRALSSSQTSSPLLEANSLCSESELSRSLELL GRCEALERKTVTFENIVCVLNREVERVSLTAEAYSRQHRLDQEKIETLSNKVRQLERSIG LKDLAMAEMEEKIRNMEASTYDGVFIWKITEFARKRQEAITGRSPAIFSPAFYTSKYGYK MCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHIIDAFRP DVTSSSFQRPVTEMNIASGCPLFCPVSVMEAKNSYVRDDAIFIKAIVDLTGL NT seq 1419 nt NT seq  +upstreamnt  +downstreamnt atggcagcagcaaactcaactccacctggctctttggatctaaaccagcctggatttcca aaggagatcctgggaactaaactagaggtcaagtatctctgctccgactgcaagaatatc ctgaggaggccgttccaggcgcagtgcggacatcgctactgttcctactgcctgaagaga ataataagtgccggaccccagaagtgcgccagctgcattcaggaagggatctatgaagaa ggaatttctattttggaaacaagctcagctttcccggacaacgcagcgcgtcgggaggtg gagagtctgcctgccatctgcattaacagcggctgcacgtggaagggcactattaaagaa tatgaggcccattacgaagtctgccctgagttcccgatgacttgtgaaggctgtgggaag acagtcccaaggcagaagtttcgggaccacgtgaaggcttgtggcagatccaaagtgcct tgcagatttggagttgttggatgcactgaggtggtggaaaatgaaaagctactggaacat gaaagcaagtgtctggcagagcatctctacatgctgctgagttttgtgctcagcctcaag actgggtctgaagacctaaagccgcttcgtgccctttcttcatcacaaaccagctctccg ctgctggaagcaaactctctgtgctcggagtcagagctttccaggtccctggagctgttg gggagatgtgaagcccttgagaggaaaacggtgacttttgagaacatcgtctgtgtgctc aatcgtgaggtggaaagggtgtctctaacagctgaagcctacagccggcagcatcgactg gaccaggagaaaatagaaacattgagtaacaaggtccggcagctggagaggagcatcggg ctcaaagacttggccatggctgagatggaggagaagatccgcaacatggaagcttccacc tacgatggagttttcatctggaagataacggagtttgccaggaagcgtcaggaggcaata accggccgctctcccgctatcttctctccagctttctatacgagcaagtacggctacaaa atgtgtctgcgtgtttacctgaatggggacggcaccggccgagggacccatctgtccctg ttctttgtggtgatgaaaggacccaacgatgccctgctgcggtggcccttcaaccagaag gtgaccctaatgctcctggatcagaacaaccgggagcacatcattgatgccttccgaccc gacgtgacatcctcctccttccagcgccctgtcacggaaatgaacattgccagcggctgc ccgctgttctgcccggtctccgtgatggaagccaagaactcctacgtgcgtgatgatgcc atctttattaaagccatcgttgatctcacgggcctctaa

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