Cuculus canorus (common cuckoo): 104059220
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Entry
104059220 CDS
T08597
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca00514
Other types of O-glycan biosynthesis
cuca04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
104059220 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104059220 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cuca01003
]
104059220 (LFNG)
Enzymes [BR:
cuca01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
104059220 (LFNG)
Glycosyltransferases [BR:
cuca01003
]
Glycan extension
O-Glycan
104059220 (LFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
104059220
NCBI-ProteinID:
XP_053936894
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All DBs
Position
15:complement(12161041..12172368)
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AA seq
366 aa
AA seq
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MLKSCGRKLLLSLVGSMFTCLLVLMVEPPARPGLARGEAGGAQRALQSLGAAAAPPPAAQ
GPPGLRSFADYFGRLSRARREVPAAPPSPPRPPAEDISPRDVFIAVKTTKKFHKARLELL
LDTWISRNRDMTFIFTDGEDEELKKQARNVINTNCSAAHSRQALSCKMAVEYDKFIESGR
KWFCHVDDDNYVNVRMLVKLLSSYPHTQDIYIGKPSLDRPIQATERISENKMHPVHFWFA
TGGAGFCISRGLALKMSPWASGGHFMSTAEKIRLPDDCTIGYIIESVLGVKLIRSNLFHS
HLENLHQVPKTEIHKQVTLSYGMFENKRNSIHMKGAFSVEEDPSRFRSVHCLLYPDTPWC
PANVIY
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagagctgcgggaggaagctgctcttgtccctcgtgggctccatgttcacctgc
ctgctggtgctcatggtggagccgccggcgaggccggggctggctcggggcgaggccggc
ggggcgcagcgggcgctgcagagcctcggggcggcggccgcaccccccccggcggctcag
ggcccccccgggctccgcagcttcgccgattacttcgggcggctgagccgagcccggcgg
gaggtgccggccgcccccccgagccccccgcggccgccggcggaggacatctccccccgc
gatgtcttcatcgcagtcaagaccaccaagaagtttcacaaggcgcggctggagctgctg
ctcgacacttggatctcccgcaatcgcgacatgaccttcatcttcacagacggggaagat
gaggagctgaagaagcaagcacgaaatgtcatcaacaccaactgctcggctgcccacagc
cgccaggccctgtcctgcaagatggctgtggagtacgacaagttcatcgagtctggcaga
aagtggttttgccacgtggacgatgacaactatgtgaacgtgcggatgctggtgaagctg
ctctccagctaccctcacacacaggacatctacattgggaagcccagcctggaccggccc
atccaggctacagagagaatcagtgagaacaagatgcaccctgtgcatttctggtttgcc
acgggcggagcggggttttgtatcagccgggggctggcactgaagatgagcccgtgggcc
agcgggggccacttcatgagcacagcagagaagatccgcttgcctgatgactgcaccatt
ggctacatcattgagtctgtgctgggcgtgaagctcatccggagcaacctcttccactca
cacctggagaacctccaccaggtgcccaagacagagattcacaaacaggtgacgctaagt
tatggcatgtttgaaaacaagcgcaactccatccacatgaagggagccttctccgtcgag
gaggatccatccaggtttcgctctgtgcactgcctgctgtaccctgacacgccgtggtgc
ccggccaacgtgatttactag
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