Cuculus canorus (common cuckoo): 104059241
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Entry
104059241 CDS
T08597
Name
(RefSeq) cystathionine beta-synthase-like protein isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca00260
Glycine, serine and threonine metabolism
cuca00270
Cysteine and methionine metabolism
cuca00670
One carbon pool by folate
cuca01100
Metabolic pathways
cuca01230
Biosynthesis of amino acids
Module
cuca_M00035
Methionine degradation
cuca_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
104059241
00270 Cysteine and methionine metabolism
104059241
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
104059241
Enzymes [BR:
cuca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
104059241
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Motif
Pfam:
PALP
CBS
DUF1414
Motif
Other DBs
NCBI-GeneID:
104059241
NCBI-ProteinID:
XP_053932110
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All DBs
Position
1:92132026..92163474
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AA seq
577 aa
AA seq
DB search
MEKLVSEERVSLSKDEMPTLPSQEKPNMNSCPHASGKYFLPGGMDNENCKPNEKEREWIR
PDTPSKCTWKLGKPISASPHRHTTLPEPLKILPSILNKVGNTPLVRINKIGKQYGLKCEL
LAKCEFFNAGGSVKDRISLRMVEDAEKAGILKPGDTIIEPTSGNTGIGLALAAAVKGYRC
IIVMPEKMSMEKVDVLRALGAEIVRTPTTARFDSPESHVGVAWRLKNEIPNAHILDQYRN
ASNPLTHYDTTAEEILQQCDGKIDMLVATAGTGGTITGISRKLKEKCPGCKIIGVDPEGS
ILATPEELNKTEKTMYEVEGIGYDFVPTVLDRSTVDQWYKSNDEDSFALARMLIREEGLL
CGGSSGSAMSVAVKAAKELKEGQRCVVILPDSVRNYMSKFLSDKWMIQKGFMKEEYLVKK
PWWWNISVQELSLSAPLTVLPSVTCAKTVEILREKGFDQVPVVDESGVILGMVTLGNMLS
SLLAGKVQPSDEVRKVIYKQFKQTDNQASGGGVINLKDNLGKLSHILEIDHFALVVHEQI
QYHSDGSSSKRQMVFGIVTAIDLLNFVTARERERKSN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggagaagttggtatcggaagagcgtgtttctttgtctaaggatgaaatgcctacactt
ccttcccaggagaagccaaatatgaattcatgccctcatgcatctggcaaatactttctc
cctggtgggatggacaatgagaactgcaagcctaatgagaaggaaagggaatggatccgc
cctgatacacctagtaaatgcacatggaagcttgggaaacccatctctgcctcccctcat
cgtcataccactctgccagagcctctgaaaatcctgccaagcatcctgaataaagttggc
aatacacccttggtgcggatcaacaagattgggaagcagtatgggctcaagtgtgaactc
ttggcaaaatgcgagttcttcaatgctgggggcagtgtgaaggaccgcatcagcctgagg
atggtagaagatgctgaaaaagctgggattttgaagcctggggacacaatcatagagcca
acctctggaaacacaggaattgggctggccttggctgcagcagtgaagggttaccgctgt
atcattgtgatgcctgagaaaatgagtatggagaaggtggatgttctgagagctctgggt
gctgagattgtgaggaccccaactactgccagatttgattctcctgaatctcatgtggga
gtggcgtggagactgaaaaatgaaatccccaatgcgcatatattagaccagtaccgcaat
gccagcaaccccctaacacactatgacaccacagctgaagagatcctgcagcagtgtgat
ggaaaaatagacatgctggtggctacggctggcacaggaggtactatcactggcatctcc
agaaagctaaaggagaagtgtccaggctgcaaaattataggcgttgatcctgaaggctcc
atccttgctacaccagaagaactaaacaagactgaaaagacaatgtatgaagtggaagga
attggttatgattttgtccccacagtgttggatagatctacagtggaccagtggtacaag
agcaatgatgaggactcatttgctttagcacgtatgctgatccgagaggaaggactgctg
tgtggtggcagctctggcagtgccatgtctgtagctgtgaaggcagccaaagagctgaag
gaaggtcagcgctgtgttgttatcctccctgactctgtcaggaactacatgtccaagttc
ttgagtgacaaatggatgattcagaaagggttcatgaaagaagaataccttgtcaaaaaa
ccttggtggtggaacatcagtgttcaggaactaagcctctctgcccctctgactgtgctt
ccatctgttacctgtgcaaagactgttgaaattctccgggagaagggattcgaccaggta
ccagttgttgatgaatctggggtgattttgggaatggttaccctgggtaacatgctttct
tcactgcttgctggaaaagttcagccttctgatgaggtcaggaaagtaatctacaaacaa
tttaaacagacagataatcaagcatcaggtggaggtgtgattaacctgaaagacaacttg
gggaaactctctcatatcctggaaatagaccactttgctctagtggttcacgaacaaatt
cagtatcattctgacggttcctccagcaagcggcaaatggtgtttggcatcgttacggcc
attgacctccttaactttgtgactgcaagagaaagggaaagaaagtccaactga
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