Cuculus canorus (common cuckoo): 104060224
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Entry
104060224 CDS
T08597
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104060224 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104060224 (TDG)
Enzymes [BR:
cuca01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
104060224 (TDG)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104060224 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
104060224
NCBI-ProteinID:
XP_053933446
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All DBs
Position
1:complement(147481131..147494822)
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AA seq
408 aa
AA seq
DB search
MEAEELGRYYAYLQQAQAFYSFPFHPMMTAAPNMEIMSEQLTLEGIPEPNIAEEPPKEVK
KGGRKRKAKVTEPKQPKKPAAKKEKSAKSKGKQEKITDSFKVKRKVDRFNGVSEAELLTK
TLPDILTFDLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSKEQLNHMDDHTLP
HKYGIGFTNMVERTTPGSKDLSSKEFREGGRILMQKLQKYKPRIAAFNGKCIYEIFSKEV
FGIKVKNLEFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGI
APNTEVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYCDRAPYESEPCNFSSN
GTEASNPQYCQGSSFGEVPNGQWMTQSFADQIPEFNAGMIREEEGSSA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaggagctgggcagatattacgcctaccttcagcaagctcaagctttttac
tcatttccattccatccaatgatgactgcagcgcctaacatggaaatcatgagtgagcag
ctgactctagagggcattccagagccaaatattgctgaggagcctccaaaagaagttaaa
aaaggaggaaggaaaagaaaagccaaagtaactgagccaaagcaacccaaaaagcctgct
gctaaaaaagaaaaatcagccaagtcaaaaggcaaacaagaaaagatcacggatagtttt
aaagtcaaaagaaaagtggaccgttttaatggtgtatctgaagcagaacttctgaccaag
actttacctgatattttgacctttgatctggatattgtaataattggcataaaccctggc
ttgatggcagcttacaaaggacatcattaccctggacctggaaaccatttttggaagtgt
ctgttcatgtctggtctgagtaaagaacagctgaaccatatggatgaccacaccttgcca
cataaatatggtattggatttacaaacatggttgaaaggacaacacctggaagcaaagac
ctttccagcaaagagtttcgggaaggagggcggattctgatgcagaagttacaaaagtac
aaacctcgtatagcagctttcaatggaaaatgtatttatgaaatttttagtaaagaagtt
tttggaataaaagttaagaacttggaatttggactgcagcctcacaaggtgccagataca
gaaactctctgctatgttatgccatcatccagtgcaagatgtgctcaatttcctcgtgca
caagacaaagttcattattatataaagctgaaagacttaagggatcagctgaaaggcatc
gcaccaaacacagaggtgcaggaggtgcagtacacgtttgacttgcaacttgcacaagag
gatgctaaaaagatggctgtcaaagaagaaaaatacgatccaggttatgaagcagcatat
ggaggcgcttactgtgaccgtgcaccatatgaaagtgaaccgtgcaatttctcttcaaat
ggaactgaagcaagcaacccacagtactgccaggggtcatccttcggtgaagttcctaat
ggacaatggatgacacagtcctttgcagaccagattccagagttcaatgctggtatgata
cgggaagaagagggaagcagtgcgtaa
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