Cuculus canorus (common cuckoo): 104060393
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Entry
104060393 CDS
T08597
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104060393 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104060393 (SMCR8)
Membrane trafficking [BR:
cuca04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
104060393 (SMCR8)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
104060393
NCBI-ProteinID:
XP_009560479
LinkDB
All DBs
Position
15:complement(9846581..9855991)
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AA seq
936 aa
AA seq
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MISAPDVVAFTREEELEGELCSEPPLPEEYSVPLFPFASHGANPWAKVASSKFTRDFILI
SEFSEQVGPQPLLTIPDDAKVPGAFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADEHKIMQQFQELSVEFSKAS
ECLKTGNRKAFANELEKKLKDLDYTRTVLHNETEIQKKANDKGYYTTQAIEKANELASVE
KSIIEHQDLLKQIRSYPYRKLLKESDFHPYEPECAPGQASTGCNRDLTTSDLAEPGETRL
YAHVPSYTPKLIKAKSAKCFDKKLKTLEELCDIYFFTQTLDQLHHIERTFRGDVCYLLTE
QISRALLKQQSVTNFLFEDVSFLEEKPPEKQYRGCQGLSQDTIDRKCSEESPAPKVVISL
GSYKSSVESVPIKMEPEIEDSQEPQMTESLTFEHQENLDYLDADIKGSISSGESIEVLGT
EKSASGLTKSDSQASLPVSPSPQAGRSKVGSRRTVSEDSIEVLSTCPSEALIPEDFKASY
PSAINEEPYVDDEEEGLRFTPKLSLDNTDDQEDILKEENLVQVDSACCIGKESPNFLDPL
PDVGQKPCEEDGVVRIPPQSYRQAEQGLRGSFGSFPSHEGISGGLLPYELESRYPAGSRD
ISKSSLDECSDSTSYISSAASTCSDRTPSPAHPAGQASDRHKKKAGQNALRFIRQYPFAH
PAIYSLLSGRTLIVLGEEEAIVKKLVTALSIFVPNCSVYAKPVKHWVTSPLHVVDFQKWK
LIGLQRTTSPAGVNVLHALSRYSRYVSILDADSKTLRCPLYKGTLVSRLADHRTQIKRGS
TYYMHVQSILTQLCSKAFLFTFCHHLHLPINEREPEESVVHRRMNFLKLQLGLANEDIKI
VQYLAELLKLQCIQEPGRGVNPLLRFDYVPSFLYKI
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccccgatgtggtggccttcaccagggaggaggagctggagggagagctg
tgcagcgagcccccgctgcccgaggagtactcggtgccgctcttccccttcgccagccac
ggtgccaacccttgggccaaggtcgccagctccaagttcactcgggacttcattctcatc
tctgagttctcagagcaagtggggccccagcccctcctgaccatccctgatgacgccaag
gtgccgggcgcttttgatctcaattatttttcccttcggatcatgtctgtggattaccag
gcgtccttcgtggggcatccacctggctctgcctatcccaagctgaactttgtggaggat
tccaaagtggtgctgggggactcgaaggagggtgcctttgcctatgtccaccacttgact
ctgtacgacctcgaagcccggggttttgtgaggcccttctgcatggcctacatctccgcc
gatgagcataaaatcatgcagcagtttcaagagctctctgtagagttctccaaagcctct
gagtgtctgaagacaggcaaccggaaggcttttgctaatgaactggaaaagaagctgaaa
gatcttgactacaccaggactgtcctgcacaacgaaaccgagatacagaagaaagccaac
gacaaagggtattacacaactcaagccatcgagaaggccaacgagctggccagcgtggaa
aagtccatcattgagcaccaagacctgctgaaacaaatcaggtcttatccctacaggaag
ctgctgaaggagtccgacttccacccctacgagcccgagtgtgcaccgggtcaggccagc
accggctgcaatcgggacctgactacctccgaccttgccgagcctggcgaaacgcgcctt
tacgcccatgtgccgtcctatacccccaagctcatcaaagcgaagtctgccaaatgcttt
gacaagaagctgaagacgctggaggagctgtgcgatatttattttttcacccagaccctg
gaccagctgcatcatatcgagaggactttcaggggtgacgtgtgctacctcctgacagag
cagattagcagggccctcttgaagcagcagagtgtaaccaacttcctctttgaggatgta
tcctttctggaagaaaaaccacctgaaaaacagtacagaggctgccaggggcttagtcaa
gacaccattgatagaaagtgttcggaagagtcccctgctcctaaagtggtcatcagcttg
gggtcctacaagtccagtgtggagtccgtgcccatcaagatggagccagaaatcgaggac
tcccaggaaccccaaatgactgagtctttgacattcgaacaccaggagaacttggactac
ctcgatgcggatatcaaaggcagcatcagtagtggtgagagcatcgaggttcttggaacg
gagaagtctgcatctggcctgaccaagtcggacagccaggccagcctccccgtcagcccc
agcccccaggcgggccggagcaaggtgggcagccggcggaccgtcagcgaggacagcatc
gaggtgctcagcacctgcccctccgaggccctcattccagaggatttcaaagcgagctac
ccaagtgccattaacgaggaaccttacgtggatgatgaagaggaaggcctccgtttcact
cccaaactaagcctggacaacactgatgatcaggaagatattttgaaagaggaaaactta
gtgcaggttgattctgcctgttgtatcgggaaggagagtcccaacttcttagaccccctg
cctgacgttgggcagaagccctgcgaggaggatggagtggtcaggatccccccgcagtcg
taccggcaggctgagcaggggctgcgcgggagctttgggagcttcccttcccacgaaggc
atctcgggtgggctccttccctacgagctcgaatcacgctacccagcgggcagcagggac
atcagtaagagcagcctggatgagtgttcggactccacgagctatatcagcagcgctgcc
tccacatgctctgacaggaccccttctccagctcatcccgctgggcaggcgagtgacagg
cacaaaaaaaaggctggccagaatgcgctgcggttcatcagacagtaccccttcgctcac
ccagccatctactcgctgctcagcggcaggaccctcatcgtgctgggagaagaggaagcg
atagtcaagaagcttgtgacagcactctccatcttcgtgccaaactgcagtgtttacgcc
aagcctgtaaagcactgggtcacttcccctctgcacgttgtggatttccagaagtggaag
ctaatcggactccagaggacgacgtcgcctgctggggtgaacgttctgcatgccttgagc
cgatacagccggtacgtcagcatcttggacgctgacagtaagactctccgctgcccgctc
tacaaaggcaccttggtgtcacggctggcagatcaccgcacgcagatcaaacggggaagc
acctactatatgcacgtccaaagcatcctcacccagctgtgctcgaaggccttcctcttc
accttctgccatcatttgcaccttcccatcaatgaaagggaaccagaggaatccgttgtg
catcgcaggatgaactttctgaagcttcaactgggccttgccaacgaagatatcaaaatc
gtacagtatttagcagagctgctgaagctgcaatgcattcaggaacccggccggggagtg
aatcccctgctcagatttgactatgtgcccagctttttgtacaaaatctag
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