Cuculus canorus (common cuckoo): 104060399
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Entry
104060399 CDS
T08597
Symbol
NTHL1
Name
(RefSeq) endonuclease III-like protein 1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104060399 (NTHL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104060399 (NTHL1)
Enzymes [BR:
cuca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
104060399 (NTHL1)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104060399 (NTHL1)
Prokaryotic type
104060399 (NTHL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-GeneID:
104060399
NCBI-ProteinID:
XP_053936372
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All DBs
Position
15:8413172..8421285
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AA seq
293 aa
AA seq
DB search
MSAVLPTGGARAARRLSGARGAAGASQVCSTAGTPRRSRRRKSIAIAYEARQGNGAEQGM
SEPQKPHWEPKHWRQQLEHIREMRRKRDAPVDEMGVEKCYDSSAPPQVMRYQVLLSLMLS
SQTKDQVTSAAMQRLRQHGLTVDRILQMDDATLGQIIYPVGFWRNKVKYIKQTTAILKQK
YGGDIPQTVEELVQLPGVGPKMAHLAMTIAWDSVSGIAVDTHVHRITNRLKWVKKETRYP
EETRVALEEWLPRDLWREINWLLVGFGQQTCLPVNPRCSECLNQDICPAAKRC
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggtgctgcccacgggcggggctcgggcggcgcggcggctcagcggggcccgg
ggggcagccggagcgagccaggtctgcagcacagccggcaccccgaggcgcagccggagg
aggaaaagcattgccattgcctacgaagccaggcaggggaatggtgccgagcaggggatg
tctgagccccagaaaccacactgggagccaaagcactggcggcagcagctggagcacatc
cgggaaatgaggaggaaaagagatgctcccgttgatgagatgggagtggagaagtgttat
gacagcagcgcgcctccacaggtgatgcgctaccaggttctgctgtcactgatgctctcc
agccagaccaaggaccaggtgacatccgctgccatgcagcgtctgaggcagcatggcctc
accgtcgacaggattttgcagatggatgatgcgacacttggacagattatttatcctgta
ggattctggaggaacaaggtgaagtacatcaagcagacgacagccatcctgaagcagaaa
tatggaggtgacataccacaaacggtggaggagctggtgcagctgccgggagttgggccc
aagatggcccacttggccatgaccattgcctgggacagcgtgtccgggatagctgtggac
acccatgtgcacaggatcaccaacaggctgaagtgggtgaagaaggagaccagatatccc
gaggaaacccgtgtagcactggaggagtggctgcccagggatctctggagggagataaac
tggctcctggtgggctttggccagcagacctgcctgcctgtaaatcctcgctgcagtgag
tgcctcaatcaagacatctgcccagctgctaagagatgctga
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