Cuculus canorus (common cuckoo): 104061037
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Entry
104061037 CDS
T08597
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca00310
Lysine degradation
cuca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104061037 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104061037 (PRDM6)
03036 Chromosome and associated proteins [BR:
cuca03036
]
104061037 (PRDM6)
Enzymes [BR:
cuca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
104061037 (PRDM6)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104061037 (PRDM6)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104061037 (PRDM6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
104061037
NCBI-ProteinID:
XP_009561201
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All DBs
Position
Z:63859929..63939844
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AA seq
568 aa
AA seq
DB search
MLKPGDAGGSAFLKVDPAYLQHWQQLFPQSSQLKSSGALAQLQPPERTEPPADSLRQRPA
SLSSASSSSSSSTPSSSATSSCVAAAAASLAGLTSLPVTQLPVFGPLPSSEPPAGGAPAA
LQGKDLCGAAGGKCGAARFRCTAEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMCADNRN
GECPMHGPLHSLRRLVGTSSAAAAAPPPEIPEWLRDLPREVCLCTSTVPGLAYGICAAQR
IQQGTWIGPFQGVLLLPEKVQAGAIRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIR
CARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNV
PSTVMEAMSRQDTLQPFNKSSKLSPATPQRSVVFPQTPCSRNFSLLDKSGSIESGFNQIS
VKNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCS
QSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFT
QATQLSRHQRMPNECKPITESTESIEVD
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggcgacgccggcggatccgcgttcctgaaggtggatcccgcctatctg
cagcactggcagcagcttttcccgcagagcagccagctgaagagcagtggagccctcgcc
cagctccagccgcccgagagaaccgagcccccggccgatagcctccgccagcgccccgca
tccctctcctccgcctcctcctcctcttcctcgtccactccgtcttcctccgccacctcc
tcgtgcgtggcagcggctgccgcttccctggccggcttgacctccctgcctgtgacccag
ctgccggttttcgggccgctgccgagctccgaacccccggccgggggagcgcccgccgcc
ctgcagggcaaagacttgtgcggagccgctggtggcaaatgcggggccgctcggttccgc
tgcacggccgaggagctggactactacctgtacgggcagcagcgaatggagatcatcccc
ttgaaccagcacaccagtgaccccaacaaccgatgtgacatgtgtgcagacaaccgcaat
ggcgagtgccccatgcatgggcccctccactccctgcggcgtctggtggggaccagcagt
gctgctgcagcagctcctccacctgagatcccagaatggctccgggacctgccccgggaa
gtgtgcctgtgcaccagcacagtgcctggccttgcttacggcatctgtgcagcacagcgg
atccagcagggcacctggattgggcccttccagggagtcctgctcttgccagagaaagtt
caagcaggagccatcagaaacactcagcatctctgggaaatatatgaccaagatgggaca
ctgcagcactttattgatggcggagaacccagtaagtcaagctggatgaggtatatccga
tgtgcaaggcactgcggggaacagaacttaacagtggttcagtacaggtcaaatatattc
taccgggcttgtatagatatccccaggggcaccgagctattggtgtggtacaatgacagc
tacacatctttctttggaattcctctccagtgcatcgcacaagatgaaaatttgaatgtc
ccttcgactgtaatggaagccatgtccagacaagacaccctacagccatttaataaaagt
agcaaactatcccctgccactccacagcgatccgtagtatttccacagactccgtgtagc
agaaatttttctctcctggataagtctgggtccatcgagtcaggatttaaccagatcagt
gtcaaaaaccaacgagttcttgcaagcccaacttcaacaagccaactaaattctgagttc
agtgactggcatctttggaaatgtgggcaatgctttaagactttcacccagcggatcctc
ttacagatgcatgtgtgtacgcagaaccctgacaggccctaccagtgtggtcactgctcc
cagtctttctcccaaccttcagagctgaggaatcacgtagttacacactccagtgacagg
cctttcaagtgtggctactgcggtcgagcctttgctggtgccacaacactcaacaaccac
atccggacacacactggagaaaaaccgttcaagtgcgagaggtgtgagaggagcttcaca
caagccacccagctgagtcgacaccagaggatgcccaatgagtgcaagccaataacagag
agcacagaatcaattgaagtggattaa
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integrated database retrieval system
