Cuculus canorus (common cuckoo): 104061381
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Entry
104061381 CDS
T08597
Symbol
IRF5
Name
(RefSeq) LOW QUALITY PROTEIN: interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104061381 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104061381 (IRF5)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
104061381 (IRF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
104061381
NCBI-ProteinID:
XP_053929629
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All DBs
Position
1:complement(209163009..209168107)
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AA seq
494 aa
AA seq
DB search
MRKRRAQVRPPMDTPSRRVRLRPWLVAQVSSGRFPGLHWLDPERRRFAIPWLHATRHLGA
PPDSHERPRRRGQRDTGRFHEGRDAPDPARWKATLRAPSNKSREFRLVLDGPRAVPPVPY
RVYELCLGSNRXADEDDYDYGEEGDVSQLQKMTSLSISDTQHGGDLLPPYPWPKEEXPLL
AAAAPVASFAPPPPVLLPREVGGTHGPPELPPTALAEPGPPLAPPAACPLVPMEQVIPNL
LISPHMLPLTDLELKFQYRGRQVCALTISNPHGCRLFHSSLEPTQEQVELFGPLTLEQVR
FPATDAIPNEKQRFYTHQLLDVLDRGLILELQGQDLYAIRLCQCKVFWTGPCASHHTGPN
PIEREKKTKLFSLEGFLNGLILFQKGQTTTPPPFEIFFCFGEEWPDQKPKEKKLITVQVV
PVAARLLLEMFSGELSWSADSIPLQISHPDLKDKMVEQFKELHQLWQNQQRLPTAQPEPS
PATGPWALPPGSLP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagcgccgagcgcaggtgcgaccgcctatggacaccccatcgcgccgcgtgcgc
ctccggccctggctcgtggcccaggtgagcagcgggcgtttcccggggctgcactggctg
gaccctgagcggcgccgcttcgccatcccctggctccatgccacccggcacctcggcgcg
ccccctgactcccatgagcggcctcgcaggcgtgggcaacgggacacgggccggttccat
gagggtcgggatgcaccggaccccgcacgctggaaggcgactctgcgcgcgccctccaac
aagagccgcgagttccgactcgtcttggacgggccccgtgcggtgccccccgtgccctac
cgggtgtacgagctgtgcctggggagcaacagatgagcagacgaggatgactacgactat
ggagaggagggggatgtcagccagctccagaagatgacatctctgagtatcagtgacacc
cagcatgggggagacctgctgcccccctacccctggcccaaggaggagnccccccttcta
gcagcggctgcccccgtggcatcctttgcaccgccccctccagtgctgctccccagggag
gtggggggcacccacgggccgcccgagctgcctcccacggccctcgccgagccggggccc
cctctggcccccccagccgcctgcccgctggtacccatggagcaagtgatccctaacctg
ctcatcagcccccacatgctgccactgaccgacctggagctcaagttccagtaccggggc
cgccaggtctgcgccctcaccatcagcaacccccacggctgccgcctcttccatagcagc
ctagagcccacgcaggagcaggtggagctctttgggccgctgacactggagcaggtccgc
ttccccgccactgacgccatccccaacgagaagcagcggttctacacccaccagctcctg
gacgtgttggaccgtggactcatcctggagctgcagggccaggacctctatgccatccgc
ctctgccagtgcaaggtcttctggacggggccctgcgcctcccatcacaccggccccaac
cccatcgagagagagaagaagaccaagcttttcagtctggaggggtttctcaatggcctc
atcctgtttcagaagggccagaccaccacccctcctcccttcgagatcttcttctgcttc
ggtgaggagtggccggaccagaaacccaaggagaagaagctcatcacggtgcaggtggtg
ccagtggcagcacggctgctgctggagatgttctcgggcgagttgtcctggtcggctgac
agcatcccgctgcagatctcccaccctgacctcaaggacaagatggtggagcagttcaag
gagctccaccagctttggcagaaccagcaacggctgccgacagcacagccagaacccagc
cccgccactggcccctgggcactgccacctgggtccctgccttag
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