Cuculus canorus (common cuckoo): 104061772
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Entry
104061772 CDS
T08597
Symbol
OTOF
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104061772 (OTOF)
Membrane trafficking [BR:
cuca04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104061772 (OTOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
HSP70
Motif
Other DBs
NCBI-GeneID:
104061772
NCBI-ProteinID:
XP_053919283
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All DBs
Position
3:66667534..66764754
Genome browser
AA seq
2044 aa
AA seq
DB search
MALLLHLRTVSGLRGKADRIAKAAFRGLSFYTRVLENCEDEAKFDETFRWPVASSIDGNE
ILEIQVFNYSKVFTNRLIGTFRMVLQKVVEEGQVEVTDTLIDDNNSAIQTSISIEIRYQA
LDGTVGTWNDKEFLETPSVHSEGDGRYPLETDSLLSGHRQGLDTSPGKSNQQSIERSFRR
MEEDDMYYHSEDELLGEGDTLSQGSLNTRAGKGVFSAMKLGKARPSKDDHRRQDEPAVLE
AEDLDRKALRQAGGLEPDTISLASVTAVTTNVSNKRSKPDIKMEPSAGRPMDYQVSITII
EARQLVGLNMDPVVCVEVGEEKKYTSMKESTNCPYYNEYFVFDFHVSPDVMFDKIIKLSV
IHSKNLLRSGTLVGSFKMDVGTVYTQPEHQFYHKWAILSDPEDLTAGLKGYLKCDIAVVG
KGDNIKTPHKANETDEDDIEGNLLLPDGVPPERQWARFYIKIYRAEGLPRMNTSIMANVK
KALIGENKDLVDPYVQVAFAGQKGKTSIQKSSYEPLWNEQIVFTEMFPPLCKRIKIQIRD
SDKVNDVAIGTHFIDLRKISNEGDKGFLPTFGPAWVNMYGSTRNYTLMDEHQELNEGLGE
GVSFRARLLMSLAVEILDTSNPEINSSTEVQVEQATSVADNCTGKMEEFFLFGAFLEATM
IDRKIGDKPINFEVTIGNYGNQIDGMTKPIRRRKKEGGDGDEEESELLHNSSEDEGDEDG
ELVSVSSSPPMKPLVTDRNYFHLPYFEKKPCIYIKSWWQDQRRRLYNANIMDKIADKLEE
GLNDVQEMIKTEKPHPERRLRGVLEELSSGCLRFVTLADKDQHHSSRTRLDRERLKSCMR
ELESMGQQAATLRSQVKKNTMKDKLKLVQNFLQKLRFLADEPQHTIPDVFIWMMSNNKRI
AYARVPSKDILYSIVDEEMGKDCAKVKTIFLKLPGKRGFGPAGWTVQAKMEMYLWLGLNK
QRKDFLGGLPCGFEEKKTARGQNLPSFPPISLLYTKKQVFQLRAHMYQARSLFAADSSGL
SDPFARVFFISQSQCTEVLNETLCPTWDQLLVFDNVELYGEAHEMRDDPPIIVIEIYDQD
TVGKADFMGRTFAKPVVKMSDEQYCPPRFPPQLEYYQIYRGNSTAGDLLAAFELLQIGPG
GKSDLPPIDGPTDIDRGPILPVPLGIRPVLSKYRVEILFWGLRDLKRVNLAQVDRPRVDI
ECAGRGVQSALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGS
HAVSSLRKFIYRPPDKKAQHWNMTAKHLNGYLAMANGAHRSRLTGEIVVNMEPEVPIKKM
ETMVKLEANSDAVVKVDVSEEEKEKKKKKKKGGGGEEVEEEEPDESMLDWWSKYFASIET
MKEQLRQQEAAAAEAEEKEEMEIAEENKLDSPMKGSRGLVKNKEKSKAPKDDKKKKQQSA
PELPEKKNKQKIEELKVFNKELETEFDNFEDWLHTFNLLRGKIGDNDDNATEEERVVGRF
KGSICVYKVPLPDDIAKEAGYEPSFGMFQGIPTNDPINVLVRVYIVRATDLHPADINGKA
DPYIAIKLGKTDIKDKENYISKQLNPVFGKSFDIEATFPMESMLTVAVYDWDLVGTDDLI
GETKIDLENRYYSKHRATCGVSQTYSIHGYNTWRDPMKPSQILSKLCKEGKVDGPHFGPG
GRVKVANRVFTGPTEIEDENGQKKQTDEHLALAVLRHWEDIPRAGCKLVPEHVETRPLLN
PDKPGIEQGRLEMWVDMFPMDMPAPGPAIDISPRKPKKYELRVIVWNTDEVILEDDDYFT
GEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYIFPFDYLMAEEKIVISKKES
MFSWDETEYKIPARLTLQVWDADHFSADDFLGAIELDLNRFPRGAKTSKQCSLEMVTNEA
DLPMISIFKQKRVKGWWPFVARDENDELEITGKVEAELHLLTAEEAEKSPAGLARNEPDP
LEKPNRPDTSFIWFLNPLKSIKYLICTRYKWLIIKIVLALLLLFMVALFLYSMPGYMVKK
LLGA
NT seq
6135 nt
NT seq
+upstream
nt +downstream
nt
atggctctgctgctgcatctccgcaccgtctccggcctccgcggcaaagctgaccgcatc
gccaaagcagcttttcgagggctctccttctacacccgggtgcttgaaaactgcgaggac
gaggccaagtttgatgagactttccgctggccggtggcaagcagtatagatgggaatgag
atcctggagatccaggtgtttaactacagtaaagtcttcaccaacaggctcattggcact
ttccggatggtcctgcaaaaggtggtggaggaagggcaggtagaggtgacggacactctc
atagacgacaataattcagccattcagaccagcatctccatagagatcaggtaccaggct
ttggatgggacagtgggcacatggaatgacaaggaattcctggagacccccagcgtccac
tcagaaggggatggcaggtatcccttagagaccgacagcctcctgtctggccatcggcag
ggtttggacacatctccaggcaaatccaaccagcagtccatagagaggagcttcagaagg
atggaagaggatgacatgtattaccacagtgaagatgaacttctgggagagggggacacc
cttagccagggatccctcaacacgagagctgggaaaggagttttttcagccatgaagctt
ggcaaggcacgtccatcgaaggatgaccatcggagacaagatgaacctgctgttttggag
gcagaagacctggaccgaaaagctctgagacaggcaggtggactggagccagacaccatc
tccttggcctctgtcacagctgtcaccaccaatgtctcaaataagaggtccaagcctgac
atcaaaatggagccgagtgctgggaggccaatggattaccaggtcagcatcaccatcatc
gaggcccggcagctggttgggctcaacatggaccctgtggtctgcgtggaggttggagag
gaaaagaaatacacgtccatgaaggaatcgaccaattgcccttactacaatgagtacttc
gtcttcgatttccacgtctccccagatgtcatgttcgacaagatcatcaaactgtctgtg
atccactcaaaaaacctcttgcgcagtgggactttggtaggctccttcaagatggatgtt
ggaactgtttatacccaacctgaacaccagttctaccacaaatgggccatcctttctgac
cccgaggacctcaccgctgggctgaaaggttacctgaagtgtgacatcgctgtggtaggg
aaaggggacaacatcaagactccacacaaagctaatgagacggacgaggatgatattgaa
gggaaccttctccttccggatggggtccctccggagaggcagtgggctcgtttctacatc
aagatctaccgagcagaggggctgccccgtatgaacaccagcatcatggccaatgtgaag
aaggctctcattggggagaacaaggacttggtagacccctacgtgcaggtggcttttgca
gggcagaaggggaagacatccatacagaaaagcagctatgaacctctctggaatgagcaa
atagtcttcacagaaatgttccccccattgtgcaagcgtataaagatccagatccgagac
tcagacaaagtcaacgatgtggccattggtacccatttcattgatttgcggaagatctct
aatgaaggagacaaaggcttcctacccacctttggccctgcatgggtgaatatgtatggc
tccactcggaactacaccctgatggatgagcaccaagagctgaacgagggtctgggtgaa
ggtgtctccttccgggccaggcttttgatgagtcttgctgtagagattttggacaccagc
aacccagagatcaacagctccaccgaggtgcaagtcgagcaggccacatcagttgctgat
aactgcactgggaagatggaggagttctttctctttggagccttcttggaagctacgatg
attgataggaagattggtgacaaacccatcaacttcgaggtcacaataggtaactatggg
aaccagattgatggcatgaccaaacccatccgacggagaaagaaagagggaggggatggg
gatgaggaggaatctgaactactccataactcaagtgaggatgaaggcgatgaggatgga
gagctagtctccgtttcttcatctccacccatgaagcccctggtcacagataggaactac
ttccacttgccatattttgagaagaagccctgcatctacatcaagagctggtggcaggac
cagcgccgcagattgtataatgccaacatcatggacaagattgcagacaagctggaggaa
gggctcaacgacgtgcaggaaatgatcaagacagagaagccacacccggagcgccggctc
cgaggggtcctggaggagctgagcagtgggtgcttgcgcttcgtgacattagctgacaag
gaccagcaccactcttcccgcacgaggctggaccgggagaggctcaagtcctgcatgcgg
gagctggagagcatgggacagcaagccgcgactctgcgatcacaggtgaagaagaacacc
atgaaagacaagctgaagctggtgcaaaatttcctgcagaaactccggttcttagctgac
gagcctcagcacactattcctgacgtcttcatctggatgatgagcaacaacaagcgcatt
gcctatgcccgcgtcccttccaaggatatcctctactccattgtggatgaggagatgggc
aaggactgcgccaaagtgaagaccatctttctcaagttacctggaaagaggggatttgga
cctgctggctggacagttcaggccaagatggagatgtacttgtggctgggcctcaacaaa
cagcgcaaagacttcttgggtggcctgccctgtggctttgaggagaagaagactgccaga
ggccaaaacctgccatccttcccacccatcagcctcctttacaccaagaagcaggtcttc
cagctgcgagcccacatgtaccaagccaggagtttatttgcagctgacagcagtggcctt
tcagacccctttgcacgagtcttcttcatctctcagagccaatgcactgaggttctcaat
gagaccctttgcccgacctgggaccagctgcttgtctttgacaatgtggagctgtatggg
gaagcacatgagatgcgggatgaccctcccataattgtcattgaaatctacgaccaggac
actgtgggcaaagctgacttcatggggcgcacctttgccaaaccggtggtgaagatgtct
gatgagcagtactgtcccccccgcttccccccacagctggagtactaccagatctaccgg
ggcaactccacagcaggtgacctgctggctgccttcgagctgctccagattggccctggt
ggcaagtcagacctgcccccaatcgatggccccacggacatagaccggggtcccatcctg
ccggtgccactggggattcggccagtgctgagtaaatacagagtggagatcttgttttgg
gggctgagggacctgaagagagtgaacctggcccaggtggaccggccccgtgtggacatc
gagtgtgctgggaggggtgtccagtcagccctcatccagaactacaagaaaaaccccaac
ttcagcactttggtcaagtggtttgaggtggatctgccggagaatgagcttctccaccca
cctctcaacatccgggtggtggactgccgggcttttgggcgttacaccctggtggggtcc
cacgctgtcagctccctccggaagttcatctatcgcccaccagataagaaagcccagcac
tggaatatgacagctaaacacctcaacggctatctggcaatggccaatggggcccatcgc
tctcgcctcacaggggagatcgttgtcaacatggaacctgaggttcccatcaagaagatg
gagacgatggtgaagctggaagctaactcggatgcagtggtgaaggtggatgtgtctgag
gaagaaaaggagaaaaagaaaaagaagaagaaaggaggaggaggagaggaagttgaagag
gaggagccagatgaaagcatgcttgactggtggtccaagtattttgcttcaattgagact
atgaaggagcaactccggcagcaggaagcagccgcggcagaagcggaggagaaggaagaa
atggagattgcggaggaaaacaaacttgactctcccatgaaaggctccaggggtctggtg
aagaacaaggaaaagtccaaggcacccaaagatgataagaaaaagaagcaacagtctgcc
ccagagcttcccgagaagaagaacaagcagaagattgaagaactgaaggtcttcaacaaa
gagctggaaacggagttcgataactttgaggactggctgcacaccttcaacctgctccgt
gggaagattggggacaatgatgacaacgcaacagaagaagaacgggtagtggggaggttc
aaaggctccatatgtgtctacaaagtgccgctccctgatgatattgccaaggaggcagga
tacgagcccagctttggcatgttccagggaatccccaccaatgaccccatcaatgtgctg
gtccgtgtctatattgtgcgggccacagaccttcacccagctgacatcaatgggaaagcc
gacccttacattgccatcaagctagggaagacagacatcaaagataaggagaactacatc
tccaagcagctgaaccctgtctttggaaaatcctttgacattgaggccactttccccatg
gagtccatgctgacagtggcggtgtacgattgggacttagtggggaccgacgacctcata
ggagagaccaagattgacctggagaaccgctactacagcaagcaccgagctacttgtggg
gtgtcacagacttactccatacatggttataacacctggcgtgaccccatgaagccctcc
caaatcctgtccaagctgtgcaaagagggcaaggtggatgggccgcactttgggccagga
ggaagagtgaaagttgccaacagggtcttcactggccccacggagattgaagatgaaaat
ggtcagaagaagcagacggatgaacacctagccctggctgtgctgcgccactgggaagac
atccctcgggcaggctgcaagctggtccctgagcatgtggagacacgtccactgctgaac
cctgacaagccaggcatcgagcagggtcgtctggagatgtgggtggacatgttccccatg
gacatgccagcgcctggccctgccattgatatttctcccaggaaaccaaagaaatatgag
cttagagtgatagtgtggaacacagacgaggtcatcctggaggacgatgactacttcact
ggcgagaaatccagtgacatttttgtcagggggtggctgaagggtcagcaggaggacaag
caagacacagatgtccattaccactcactcactggtgaaggcaacttcaactggcgctac
atcttcccctttgactacctgatggcagaagagaagattgtcatctccaagaaggagtcc
atgttctcctgggatgagacagagtacaagatcccagctcgcctcaccctgcaggtctgg
gatgctgaccacttctcggctgacgatttccttggggccattgagctggacctgaaccgc
ttcccccggggagccaagacatcgaaacagtgcagcctggagatggtgacgaacgaggca
gatctgcccatgatctccatcttcaagcagaagcgggtgaagggctggtggccattcgtg
gccagagatgagaacgatgagctggagatcactgggaaagttgaggctgaactgcacctt
ctgacagcagaggaggcagagaaatcccctgctgggctggctcgcaacgagcctgatccg
ctggagaagcccaaccgcccggacacatccttcatctggttcctgaacccactcaagtcc
atcaaatacctcatctgcacacgctacaagtggctcatcatcaaaatcgtactggccctg
ctgctcctcttcatggtcgcccttttcctctacagcatgccaggctacatggtcaagaag
ctgctgggagcatga
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integrated database retrieval system
