Cuculus canorus (common cuckoo): 104062219
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Entry
104062219 CDS
T08597
Symbol
BABAM2
Name
(RefSeq) BRISC and BRCA1-A complex member 2
KO
K12173
BRCA1-A complex subunit BRE
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104062219 (BABAM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cuca04121
]
104062219 (BABAM2)
03036 Chromosome and associated proteins [BR:
cuca03036
]
104062219 (BABAM2)
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104062219 (BABAM2)
Ubiquitin system [BR:
cuca04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104062219 (BABAM2)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
104062219 (BABAM2)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
104062219 (BABAM2)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
104062219 (BABAM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
UL17
Motif
Other DBs
NCBI-GeneID:
104062219
NCBI-ProteinID:
XP_053919756
LinkDB
All DBs
Position
3:104908212..105081591
Genome browser
AA seq
383 aa
AA seq
DB search
MSPEVALNRISPALSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPSCDRFKLHI
PYAGETLKWDIIFNAHYPDLPPDFIFGEDAEFLPDPSALHNLASWNPSNPECLLLVVKEL
VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD
FSNIPTYLLKDMNEDPGEDVALLSVSFEDAEATQVFPKLYLSPRIEHALGGSSALHIPAF
PGGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL
LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK
RAKAYFKTFVPQFQEAAFANGKL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctgaagttgccttgaataggatttctccggcgctctcacccttcatttccagt
gtagtcagaaatggaaaagtaggactggatgctactaattgtttacggattacagacttg
aaatctggctgtacatccttgacccctggacctagctgtgatcggtttaagctacatatc
ccttatgctggagaaacactcaaatgggatataattttcaatgctcactatcctgacctg
ccaccagattttattttcggagaggatgctgaatttttgccagatccgtctgccttgcat
aatttagcttcttggaatccttcaaatcctgaatgcctcttgcttgttgtgaaggagctt
gtgcagcagtatcaccaatttcagtgcagccgattacgtgagagctctcgtctcatgttt
gaatatcagactttacttgaagagccccaatatggagaaaacatggaaatctatgctggc
aaaaagaataactggactggagaattctcagctcgcttcctcttgaagttgcctgtagat
ttcagcaatattcccacataccttctcaaggacatgaatgaagatcctggagaagatgtt
gcacttctctccgtcagttttgaggatgcagaagctactcaggtttttcctaagctgtat
ctctctccgcgtattgaacatgcacttggaggatcatctgcccttcacatcccagccttt
cctggtggaggttgtcttatcgactatgtaccccaagtatgccagctgctaacaaacaag
gtacaatatgttattcagggttaccataagagaagagagtatattgcagctttcctgagt
cactttggaactggtgtggtggagtatgatgcagaaggcttcacaaagcttactctcttg
ctgatgtggaaagacttttgcttccttgttcacattgacctacccctgtttttccctcga
gaccaaccaaccctaacgtttcagtccgtctaccacttcactaacagtggccagctgtac
tcccaggcccagaagaattacccttacagcccccgctgggatggcaatgaaatggccaag
agagcaaaggcatatttcaaaacctttgtccctcagttccaggaggcagcatttgccaat
gggaagctttag
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integrated database retrieval system
