Cuculus canorus (common cuckoo): 104062852 Help Entry 104062852         CDS       T08597                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism cuca  Cuculus canorus (common cuckoo) Pathway cuca04115   p53 signaling pathway cuca04145   Phagosome cuca04148   Efferocytosis cuca04350   TGF-beta signaling pathway cuca04510   Focal adhesion cuca04512   ECM-receptor interaction cuca04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cuca00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     104062852 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104062852 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     104062852 (THBS1)    04148 Efferocytosis     104062852 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     104062852 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     104062852 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     104062852 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cuca04131]     104062852 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cuca00536]     104062852 (THBS1) Membrane trafficking [BR:cuca04131]  Endocytosis   Phagocytosis    Opsonins     104062852 (THBS1) Glycosaminoglycan binding proteins [BR:cuca00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104062852 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS Laminin_G_3 TSP1_CCN Laminin_G_2 EGF Motif Other DBs NCBI-GeneID:  104062852 NCBI-ProteinID:  XP_053924297 LinkDB All DBs Position 5:complement(58351399..58367425) Genome browser AA seq 1176 aa AA seqDB search MGPTSALFLLLLLGASEAKRTAESRSDDNSVFDLFELIGFIRKGAGRRAPGVYLVKGPES SSPAYRIEDASRIPAVPDSKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLSVEQKDGSG HVFSLVSNGKAGTLDLSLSGDGKQQLVSVEDALLATGHWKNITLFVQEDRAQLYVGCEQM ENAELDIPIQNIFTKDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLEAILRNKGCSS STSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTLQ DRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVSCP LMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCE GSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGKPC EGEARENKPCQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCVGE ARGTQVCNKQDCPIDGCLSNPCFAGTTCTSSPDGSWKCGACPAGYHGDGVHCQDIDECKE VPDACFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMANKQVCKPRNPCTDGT HDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCK KDNCPNLPNSGQEDYDKDGIGDACDNDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGDRC DNCPYNHNPDQTDTDNNGEGDACAVDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQCD NCPLEHNPDQEDTDSDLIGDECDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDAC DHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVDISE TDFRKFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFI NTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPGE HLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMAD SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP NT seq 3531 nt NT seq  +upstreamnt  +downstreamnt atggggccaacgtctgcgcttttcctcctcctcttgctcggagcctccgaggccaaacgc acggcagagtccaggagtgacgataacagtgtcttcgatctttttgaactcattggcttc attcggaagggagctgggcgccgggcacctggagtgtacctggtgaagggaccagaatcc tccagccctgcttaccgcattgaagacgccagtcgcatccctgctgtccctgactcaaag tttcaagacttactagatgccatccatgctgagaagggcttcatcctcctggccactctc cggcaggccaagaagagcagaggcacgctgctgtctgtggaacagaaagatggctctggt catgtcttcagtctggtatcaaatggcaaggcaggcaccctggacctgagcctctctggt gatggaaagcagcagttagtgtcagtagaggatgccttgctagctacaggacattggaag aatatcaccctgtttgtgcaggaggaccgagctcagctttatgtgggatgtgagcaaatg gagaatgctgaactggacatccccatccagaacatcttcactaaggacctggccagcagt gccaggctccgtattgccaaagggggcgtcaatgacaacttccagggactgctgcagaat gtgcggtttgtgtttggaacaactctggaagccatcctgaggaacaaaggctgctccagc tcaacaagtgcgatcattactttggacaaccctatcaatggttccagcccagctatccgc actaattacatcggccataaaacaaaggacattcaagcagtctgtggcttttcctgtgat gaactaacaaatatgtttgtggaactgcaagggctccggtctatggttacaacacttcaa gacagagttcggaaagtgactgaagaaaacgaactcattgccaaagtggtccagatcact cctggagtatgcattcataatggaatcttgcacaaaaataaagaagagtggactattgac agctgcactgaatgtacctgccagaactctgccaccatatgccggaaagtttcttgtcct ctcatgccttgttctaatgccaccgtgcctgatggggagtgctgcccccgatgctggcct agcgactacgcagatgatggatggtctccttggtccgaatggacttcatgttctgtgacc tgtgggaatgggattcagcagagagggcgatcctgtgacagtctcaataaccgctgtgaa gggtcttctgtacagactcggacttgccaccttcaggagtgcgataagagatttaaacag gatggtggctggagtcactggtcgccatggtcatcatgttccgtcacatgtggcacgggt atcatcactagaattcgtctctgcaactctccagtaccacagctgaatggcaaaccttgt gagggtgaggcaagagaaaataaaccttgccagaaagatccttgtccaattaatggcaac tggggaccatggtctccatgggatgcttgcacagtgacgtgtggaggaggccttcaaaaa cgtagccgactctgtaataatcctgagcctcagtatggtgggaagacttgtgtaggtgaa gccagagggactcaagtctgcaacaaacaggactgtccaattgatggatgcctgtctaat ccctgctttgcggggactacatgtaccagctcccctgatggttcttggaagtgtggtgcc tgtcctgctggctaccacggtgatggtgtccactgtcaagatattgatgagtgcaaagag gttcctgatgcgtgctttgtcttcaatggagtgcacaggtgtgagaatactgaacctggg tacaactgtttgccatgtccaccacgtttcactggcacacagccttttggtcgcagtgtt gaggatgccatggctaacaaacaggtctgcaagccacgtaatccgtgcacagatggaaca catgactgcaacaagaatgccaaatgcaattaccttggccacttcagtgaccccatgtat cgctgtgaatgtaaaccaggctatgctggcaatggcataatctgtggagaagatactgac ttggatggatggccaaatgagaacctcgtttgtgttgccaatgccacttaccactgtaaa aaagataactgccctaatctgcccaactctggacaagaagactatgataaggatgggatt ggtgatgcctgtgacaatgatgatgatgatgatggtattcctgatgaccgggacaactgt ccattcatctacaacccacagcagtatgactatgacagggatgatgttggtgaccgctgt gataactgcccctacaatcacaaccctgatcaaactgacactgacaacaatggagaagga gatgcatgtgcagtggatattgatggagatggggtccttaatgaaagggataactgccaa tatgtctacaatgtagaccagagggatacagacctggatggtgttggagatcagtgtgat aactgtccactggaacacaaccctgaccaggaagatactgattctgacctcataggcgat gagtgtgacaacaaccaagatatagatgaagatggccaccaaaataatcttgataactgt ccgtatgtgcccaatgccaatcaagctgaccacgacaaggatggaaagggagatgcctgt gaccatgatgatgacaatgatggtatccctgatgacaaagataactgcagactggttgcc aacccagatcaagctgattctgatggtgatggacgtggagatgcttgcaaagatgacttt gaccaagacagtgtgccagacattgatgatatctgccctgaaaatgtggacataagtgag actgatttccgaaaatttcagatgattcccctggatcccaagggaacatcccaaaatgat ccaaactgggttgttcgtcaccagggtaaagaactggttcagacagtcaactgtgaccct ggccttgcagttggttttgatgaattcaatgctgtggacttcagtggcaccttcttcatc aatacagaaagggatgatgattatgctggctttgtatttggctaccaatccagcagtcgt ttctacgttgtcatgtggaagcagatcacccagtcctactgggactccacaccaaccaaa gctcaaggctactcgggtctctccatcaaagttgtgaattctaccactggtccaggagaa caccttcgtaatgctctgtggcacacaggaaacactcctggccaggtgagaactttgtgg catgaccctcgtcatataggctggaaagacttcaccgcatacagatggcgtcttagccat agaccaaagactggttacatcagggttgtgatgtacgaagggaagaaaatcatggcagac tcgggacctatctatgataaaacctacgctggtggtcggttaggactgtttgtcttctct caagaaatggtgtttttctcagatcttaaatacgaatgcagagatccataa

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