KEGG   Cuculus canorus (common cuckoo): 104063597
Entry
104063597         CDS       T08597                                 
Symbol
IFT122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
cuca  Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:cuca00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cuca03037]
    104063597 (IFT122)
Cilium and associated proteins [BR:cuca03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   104063597 (IFT122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122 Zn_ribbon_IFT122_C Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz ANAPC4_WD40 EIF3I WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_NUP159_NUP214 Beta-prop_Vps41 TPR_GEMI5 TPR_IFT80_172 Beta-prop_EML Beta-prop_WDR90_POC16_2nd TPR_IF140-IFT172 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_HPS5 PEP5_VPS11_N WD40_MABP1-WDR62_1st WDR90_beta-prop_4th eIF2A B-prop_COPA_B_2nd TPR_7 Beta-prop_WDR75_1st TPR_COPA_B ANAPC3 Beta-prop_IFT140_2nd Beta-prop_SPT8 TTC7_N Zf_2nd_IFT121 TPR_2
Other DBs
NCBI-GeneID: 104063597
NCBI-ProteinID: XP_053932858
LinkDB
Position
11:complement(9817667..9850441)
AA seq 1195 aa
MLKGIDFLPTNMVFSWHFCLFVCFSIYDLAFKPDGTQLIIAAGNRLLVYDTSDGTLIQPL
KGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCLSYNPLTHQLA
SCSSNDFGLWSPEQKSVSKHKTSSKITCCSWTNDGQYLALGMFNGIVSIRNKNGDEKVKI
ERTGGASSPIWSICWNPSRDERNDTLAVADWGQKLSFYQLSGKQIGKDRMLNFDPCCVSY
FTKGEYILLGGSDKQVSLFTKDGVRLGTIGEQSSWVWTCKVKPDSNYVAVGCQDGTISFY
QLIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKGRELVKKIAIYKNRLAIQMPEK
ILIYELYSDDSADMYYRVKEKIVKKFECNLLVVCSEHIILCQEKRLQCLSFHGVKEREWL
MESLIRYIKVIGGPPGREGLLVGLKNGQILKIFVDNAFAIVLLKQSTAVRCLDMSASRNK
LAVVDENDTCLVYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASNFPVHQQ
KLQGFVVGYNGSKIFCLHVFSMSAVEVPQSAPMYQYLERKMFKEAYQIACLGVTDTDWKE
LAMEALEGMEFETAKKAFTRVRDLRYLELISSIEERKKHGENNNELFLADVYAYQGKFHE
AAKLYKKCGREDLALDMYSDLCMFDYAKDFLGSEDPKDTKMLIKKQADWAKNMNEPKAAV
EMYLSAGEHMKAIDISGDHGWVDMLIEIARKLDKAEREPLLKCAFYFKKLDNPGYAAETY
VKIGDLKALVHLHVETCRWEEAFALCEKHPEFKDDVYVPYAQWLAESDRFEEAQKAFHKA
GRQTEAVRVLEQLTHNAVVESRFNDAAYYYWMLSMQCLDIAQENEQQKSEMLQKFHHFQH
LAEVYHVYHSIQRYTEEPFSFHLPETLFNISRFLLHSLTNETPLGISKVNTLFTLAKQSE
ALGAYKLARHAYDKLQGLQIPARFQKSIELGSLTIRSKPFHDSEELVPLCYRCSTNNPLL
NNLGNVCINCRQPFVFSASSYEVLHLVEFYLEDGITDEEAVALIDLEAPRLNKRENKWQE
VMHDNAQSLRLDDSTDIIEDDDPFTAKLSFEQGGSEFVPVVVNRAVLQSMSRRDVLIKRW
PKPLRWQYYRSLLPDASITMCPSCFQMFHTEDYELLVLQHNCCPFCRRRIDESNQ
NT seq 3588 nt   +upstreamnt  +downstreamnt
atgttaaagggaatagattttctgcctactaatatggtcttttcttggcatttttgtttg
tttgtttgttttagtatttatgatcttgcattcaaaccggacggaactcaattgataatt
gctgctggaaatagactgctggtatatgatacttctgatggaactttaattcagcctttg
aaaggacacaaggatactgtatactgtgtggcttatgctaaagatggcaaacgttttgca
tctggctctgctgataaaagtgtgataatttggacttcaaagttagaaggaattctgaaa
tacacgcataatgactctatacagtgcctttcgtacaatcctcttactcatcagttggca
tcctgctcttctaatgattttggcttgtggtctcctgaacagaagtcagtctctaaacat
aaaactagcagtaagattacttgctgtagctggacaaatgatggccagtaccttgccttg
gggatgttcaacggcattgtcagcataaggaataaaaatggtgacgagaaagttaaaata
gagcgtacagggggtgcttcgtctccaatatggtctatttgttggaatccatccagagat
gaacgcaatgatactttagctgtggcagactggggtcagaaactttccttttaccagctt
agtggcaaacagattggcaaggatagaatgctcaattttgatccatgctgtgttagctat
tttactaaaggagagtatattttactgggaggttcagataaacaagtttccctcttcacg
aaggatggcgtgcgtcttggtaccataggagagcaaagcagttgggtgtggacatgcaaa
gttaagccagactccaactatgtggcagtaggatgccaagatggaacaatatccttttat
cagttgattttcagcactgttcatggtctttataaggatcggtatgcttacagagacagc
atgactgatgttattgtccaacacctcatcacggaacaaaaagttagaataaaaggcaga
gagcttgtaaagaaaattgcaatctacaaaaacagattagctatccagatgccagagaaa
atcttaatttacgagttatactcagatgattctgcagatatgtattatcgggtgaaggaa
aagatagtaaaaaaatttgaatgcaacttgctggttgtatgttcagaacacattatttta
tgtcaggagaaaagattacagtgcctctcgtttcatggtgttaaagaacgagaatggctg
atggaatctcttattcgttatattaaagtaattggaggacctccaggaagagaaggcctc
ttggttggtctgaagaatggtcagattctaaagatatttgtcgataatgccttcgcaatt
gtcctgttgaagcaatccacagctgtgcgctgtctggatatgagtgcatcccgaaacaag
ctggcagtggttgatgagaacgatacctgcctagtgtatgatatccataccaaagaactg
ttgtttcaggaacccaacgctaacagtgtggcttggaatacacagtgtgaggatatgctt
tgcttttctggagggggttacctcaatatcaaagctagtaacttccctgtccatcagcaa
aaacttcaaggctttgttgtgggttacaacggctccaagatcttctgtcttcatgttttt
tctatgtcagctgttgaagttccgcagtctgcacccatgtatcaatatctggaacgaaaa
atgtttaaagaagcttatcaaattgcgtgcttaggagtaactgatactgactggaaagaa
ttggccatggaagccttagaagggatggagtttgaaactgctaaaaaggcatttaccagg
gtacgagatcttagatatttagaattgatcagcagcatagaggagcggaagaagcatgga
gagaacaacaatgaactgttcctagcagatgtctatgcctaccagggaaaattccacgag
gcagcaaagctgtacaagaagtgtggacgtgaagacttagctctcgatatgtactctgat
ttatgcatgtttgactatgcaaaggattttctgggatctgaagaccccaaagacacaaag
atgttaataaaaaaacaagcggattgggccaagaacatgaatgaaccaaaggcagcagtg
gagatgtacctctctgcaggcgagcacatgaaggccatagatatcagtggggaccacggc
tgggttgatatgttaatcgaaattgctcgaaaactggataaagctgagcgtgagcctttg
ttaaaatgtgccttctattttaagaaacttgataaccccggctatgcagcagaaacgtat
gtgaagattggtgacctgaaagcattggtccatctgcacgtggagacctgtcgctgggaa
gaagcatttgctttgtgtgaaaagcatcctgaattcaaagatgatgtctatgtcccttat
gctcagtggctagcggagagtgatagatttgaagaagcccaaaaagcatttcataaggct
ggcaggcagactgaagctgtaagagtgctggagcagctaacacacaatgctgtggttgaa
agccgatttaatgatgcagcctattattattggatgctttccatgcagtgtttagatata
gcccaagagaatgaacaacagaagtctgaaatgttgcaaaagtttcatcacttccagcat
ttggcagaagtttaccatgtctatcactctattcaaagatacactgaggagcctttcagt
ttccacttgcctgaaaccctcttcaatatttccaggtttctgcttcacagcttaacaaat
gagactcctttggggatctcaaaagtcaatacattatttaccctggcaaaacagagtgaa
gctcttggtgcgtataaactggctcgtcatgcctatgacaagttacagggactgcagatc
ccggctaggttccagaaatcaattgagctgggcagcctgacaatccgatccaagccattc
catgacagtgaagagcttgtgcccttgtgttataggtgctctaccaacaaccctttgcta
aataacttgggaaacgtctgcattaactgcagacaaccttttgtcttctctgcttcctcc
tatgaagtactgcatctggtcgagttttatttggaagatggcatcacagatgaagaagct
gtagctctcattgacctcgaagctccaagattgaataaaagagagaataaatggcaagag
gtgatgcatgacaatgcacagagtttgaggcttgatgacagtacagatattattgaagat
gatgatccctttacagcaaaactgagctttgagcaaggaggctcagaatttgttccagtg
gttgtgaaccgtgctgttctgcagtcaatgagccgaagggatgtcctgattaaacgctgg
ccaaagccattgcggtggcagtactaccgttccttgctaccagatgcctccattaccatg
tgcccatcatgttttcagatgtttcacactgaagactatgagcttctcgtactccagcat
aattgttgtccgttctgtcgacggaggatagatgagtcaaaccaatga

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