Cuculus canorus (common cuckoo): 104063638
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Entry
104063638 CDS
T08597
Symbol
PLXND1
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
104063638 (PLXND1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
TIG_2
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
104063638
NCBI-ProteinID:
XP_053932857
LinkDB
All DBs
Position
11:9719981..9803307
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AA seq
1923 aa
AA seq
DB search
MAPAEPRSPAPLLLLLLLLLLLPGRAAGLEVQRKFRSPTPTNNFALDGPGSRVYLAAVNR
LFQLSGGELALEAEAAVGPVLDSPLCHAPQLPQASCEHPKVLTNNYNKILQPDPEQGVLV
VCGSIYQGLCQLRSMANISAVAVRFPPGGSDPVTVFPSMLNVAANHPNASTVGLVLRRGG
GGARLLVAATYTGFGSPFFPRNGSLEDHRFENTPEIAIRALNARGDLAKLFTFDINPSDD
NIFKIKQGAKARHKLSFVRAFLQRGAAPPARRPYAYLALNSEANAGDKESPSHSLLARIC
LGDPAEATLNGSGETKKLTESYIQLGLRCGGAADAFTRLVSVFPARAAWRSPAAPASAPP
PPEELLFGVFERAGAGGGRPHSALCVFRFSEIEETIRTARNSCFVSPGAGMVTVLDSVVQ
GTGPACEKRNIQLQPEQLDCGAAHLQHPLAIVNPVTATPVFTYSGLTSVAVASVNNYTVV
FLGTASGGLMKINLDSTMKVISRRSISVAYGEPVHPIMQFDPSDSTYLYLMTSYQMTRVK
VAACNQYSTCTECLAAADAYCGWCTMETRCSLQHECTNFTGANFWASASEGVQQCPSMTI
LEPEINIDKENPALIIQINGTIPNLNGTNISCDYGNNIHTVARVAGDYVNQFIYCSLLPR
EKYPAFPDDQDHVVVETALRVNSKNIIQANFTIYDCKRTGNIYPKRACTSCLSTKWKCHW
CPSTYTCVSNHSQCDDALQMKKKIDCPRIVPASLDPMPTGVSRDIIISLANATFSKETAL
ECHFGTDRTFEARWVNSSAVECIHVLLHTSEKSHLFPVNLQLKDKPDRFIDSPEMMTVEV
YNCATGSADCSQCLGREDLGHRCIWSESSSSCRLHSEPLQISDVCPAPEIKKIEPLRGPL
EGGTLLTIRGRNLGRRFSDVLGAIRIGNVHCVPLPHRYIVSETIVCQTGEAQEAFSDVVT
VNVSREGKSRERYSYVLPVVQSIAPLNGPKAGGTRVTIRGSRLDVGSELRVLVNTSKQCT
DLSRNDSTITCTMPSTELTTVVRICVQFENKSCASHNITFKYEKNPTISDINPKKSQISG
GRIITLEGRGFELVQNVSMVVRGIGREQTSCKVHTDSMITCPSPAASNITAGSKPASVDF
YLNGRLYADDRPALDEEVYPEEALHISKFSLEYYADPQFFTAKKEKWIKHHPGEPLTLVI
HKEPDSLGLESNEYQVKIGLISCEIQIVSDKVIHCSVNESLNTSERQLPVTIQVGKFNYT
IAMLHLGGGETAIIVSIVICSILLVLSVVALFVFCTKSRRAERYWQKTLLQMEEMESQIR
EEIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLYEECYILPSQQLS
SQVQETHPLLVGEWKIPESCRPNMEEGMSLFSTLLNNKHFLIVFVHALEQQKDFAVRDRC
NLASLLTIALHGKLEYYTSIMKDLLVDLIDASASKNPKLMLRRTESVVEKMLTNWMSICM
YSYLRETVGEPFFLLICAIKQQINKGSIDAITGKARYTLNEEWLLRENIEAKPRNLNVSF
QGCGMDSLSVRAMDTDTLSQVKEKILEAFCKNVPYSQWPRVEDVDLEWFATSTDSYILRD
LDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLSDKKDTTLSRVKDLDTEKYFHLVLPTDE
SVEHKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILSIRDDKPPVAVKYFFD
FLEEQAEKRGITDPDTIHIWKTNSLPLRFWVNILKNPQFVFDIDKTDHIDACLSVIAQAF
IDACSLSDLQLGKDSPTNKLLYAKEIPEYRKIVQRYYKQIHDMPPLSEQEMNAHLAEESR
KYRNEFNTNVAMAEIYKYAKRYRSQIVAALDANPTTKRTQLQHKFEQVIALMEDNIYECC
SEA
NT seq
5772 nt
NT seq
+upstream
nt +downstream
nt
atggctccggctgagccgcgctcccccgcgccgctgctgctcctgctgctgctgctcctg
ctgctccctggccgcgccgccggcttggaggtgcagcgcaagttccgctcgcccaccccg
accaacaacttcgccctggacggccccgggtcccgcgtgtacctggcggccgtcaaccgg
ctcttccagctgtcggggggcgagctggcgctggaggcagaggcggcggtggggccggtg
ctggacagcccgctgtgccacgctccgcagctgccgcaggcctcctgcgagcaccccaag
gtgctcaccaacaactacaacaagatcctgcagcccgaccccgagcagggcgtgctcgtc
gtctgcggctccatctaccaggggctctgccagctgcgcagcatggccaacatctcggcg
gtggccgtgcgcttcccgcccggcggcagcgacccggtcaccgtgttccccagcatgctg
aacgtggctgccaaccaccctaacgcctccaccgtggggctggtgctgcgccgcggcggc
ggcggggcgcggctgctggtggccgctacctacacgggcttcggcagccccttcttcccc
cgcaacggcagcctggaggaccaccgcttcgagaacacgcccgagatagccatccgcgcc
ctcaacgcccgcggagacctggccaagctcttcaccttcgatatcaacccctccgacgac
aacatcttcaagatcaagcagggcgccaaggcacggcacaagctcagcttcgtgcgcgcc
ttcctgcagcgcggagccgcgccgcccgcccgccgcccctacgcctacctggcgctcaac
agcgaggccaacgcgggcgacaaggagagcccctcgcacagcctgctggcccgcatctgc
ctgggcgacccggccgaggccaccctcaacggcagcggcgagaccaagaagctgaccgag
tcctacatccagctggggctgcgctgcggcggcgccgccgacgccttcacccgcctcgtc
tccgttttcccggcacgggccgcctggcgcagccccgccgcccccgcctcggccccgccg
ccccccgaggagctgcttttcggtgtcttcgagcgggccggggccggcggcggccgcccg
cactccgccctctgcgtgttccgcttctccgagatcgaggagacgatccgcaccgcccgc
aactcctgcttcgtcagcccgggcgccgggatggtcaccgtgctcgacagcgtggtgcag
ggcaccggccccgcttgcgagaagaggaacatccagctgcagccagagcagctggactgt
ggagcagcacaccttcagcacccactggccatcgtgaaccccgtcacagcgacccccgtg
ttcacctacagcggcctgacctcagtggcggtggccagcgtcaataactacactgttgtg
ttcctgggaactgccagcggaggactcatgaagattaatctggacagtaccatgaaggtt
attagcaggagatccatttcggtggcttatggagagcctgttcaccccatcatgcagttc
gacccttctgattccacctacctctatctgatgacctcctatcagatgacacgagtgaag
gtggctgcctgcaaccagtactcaacgtgcacggagtgcctggctgccgctgatgcttac
tgtggctggtgcacaatggagaccaggtgttctctgcagcacgagtgcacaaacttcaca
ggggccaacttctgggcgagtgcaagtgaaggagtacagcagtgcccttccatgaccatc
ttggagcccgagattaatatcgacaaagaaaacccggccctgataattcaaataaatggg
actatcccgaacctgaatggaacaaatatttcgtgtgactatggaaataatatccacaca
gtagccagagttgctggagattatgtaaaccagtttatttattgcagtttgcttcctcgc
gagaaatatccagcatttccagacgaccaagaccacgtggttgttgaaactgctctccga
gtcaacagcaaaaacattatccaggccaatttcaccatctacgattgcaaaagaactgga
aacatttacccaaagagagcatgcaccagctgcctctcaaccaagtggaagtgtcactgg
tgcccctccacctacacctgtgtctccaaccactcacagtgtgatgatgcgctgcagatg
aagaagaaaattgactgtccacgaattgtacctgcctcgttggacccaatgcccacagga
gtatctcgggacattataatctcactggctaacgcgactttctcaaaggagacagctctg
gagtgccattttgggacagacaggacatttgaagcccggtgggtgaactcctctgctgtg
gagtgcatacacgtattgctccatacatcagaaaaaagccatcttttcccagtgaacctt
cagctgaaggacaaaccagacagatttatcgacagtccagagatgatgacagttgaggtg
tacaactgcgcgactgggagtgctgactgttcccagtgcctggggagggaggacctgggg
caccgctgcatctggagtgagagcagctccagctgcagactgcacagcgagcccctccag
atctcagacgtctgcccagctccagagattaagaagattgagccgctgcgtgggccactg
gagggaggcaccctgctgaccatccgtgggaggaaccttggccgccgcttcagtgacgtc
ttgggtgccatcaggataggcaatgtgcattgtgtgccactgccccacagatacatcgtc
tctgagacgattgtgtgccagaccggagaggctcaggaggcgttttctgatgtggtgaca
gttaatgtgagccgggaagggaagtccagggagcgatactcctacgtgcttcctgtggtg
cagtccatagctcccctgaatggcccgaaggctggaggaaccagagtgaccatcagaggc
agcaggctggatgttggctctgaactccgcgtccttgtcaatacctccaagcagtgcact
gacctcagccgcaatgacagcactatcacctgcaccatgccgtccacggagctcactaca
gttgtgcgaatctgcgttcagtttgagaacaagtcttgtgccagccacaacatcacattc
aagtatgagaagaacccaactatatcagacatcaacccaaaaaagagccagatcagtggg
ggcaggatcatcaccctggaaggaagaggctttgagctggttcagaatgtgtccatggtt
gttcgtggcatcggcagagagcaaacgagctgtaaggttcacaccgacagcatgatcacc
tgcccctctccagctgcctccaatatcactgctgggagcaagcctgcgtccgttgatttc
tatctcaacggtcgcctctatgcagatgaccgtccggctctggatgaggaggtgtaccct
gaggaggccttgcacatcagcaagttcagcctggagtactatgctgatccccagttcttc
accgccaagaaggagaagtggatcaaacaccatcctggagagcctttgactctggttata
cataaagagcctgacagcctgggcctcgaaagcaatgagtatcaagtgaaaattggcctt
atctcgtgcgaaatccagattgtttcggacaaagtcatccactgctctgtcaacgagtca
ctgaacacctcagaaagacagttacccgtgacgatccaagttgggaagttcaactacaca
attgcaatgctgcaccttgggggaggagagaccgcaatcattgtctccattgtcatctgc
agcatcttactggtcctctctgttgtagctctctttgtattttgcacaaagagccgcaga
gcagagcgctactggcagaaaaccctgctccagatggaggagatggaatcgcaaatccgg
gaggaaatccgcaaaggttttgcagaactgcagacagacatgacagacctgaccaaggag
ttaaaccgcagccaggggatcccgttcctagagtacaagcactttgtcacccggacgttc
ttccctaaatgttcctcactctacgaggagtgttacatcctgccatcccagcagctcagc
tcccaggtccaggaaacccatccgctcctggtgggggaatggaaaatccctgaaagctgc
agacccaacatggaagaaggaatgtcgctgttctccaccttactcaacaacaagcacttt
ctcattgtgtttgtccacgctctcgagcaacagaaggacttcgctgttagagacagatgt
aacctagcctccctgcttactattgcgttgcatgggaaactggaatattacaccagcatc
atgaaggacctcttggtggatctaatagatgcttcagcttccaaaaaccccaagctaatg
ctgaggagaacggaatctgtagtggaaaagatgctcaccaactggatgtccatctgcatg
tacagctatctcagagagacagttggagaacctttcttcctgctgatttgtgcaatcaag
cagcagattaacaaagggtccatcgatgccattacaggaaaagccagatacaccctcaac
gaggagtggctcctgagggagaacatcgaggcaaagccgaggaacctcaacgtctccttc
caaggttgtgggatggactccctgagcgtcagggccatggacacagacacgctcagccaa
gtgaaggagaagattctggaggccttctgcaagaacgtcccctactcccagtggccaagg
gtagaagatgttgacctcgagtggtttgccactagcaccgacagctacatcctccgggac
cttgatgacacctcggtggtagaggatggcaggaagaaactcaacacattagcacattac
aagatccctgaaggggcgtcactggccatgagtttgtcggacaagaaagacacgacgcta
agcagagtgaaggatttggacactgagaagtacttccacttggttcttccaactgatgaa
tcagttgaacataagaagtcccacagacagagccatagaaagaaagtccttccagagatc
tacctgacgaggctgctctccacaaagggcactctgcagaagttcctggacgacttgttc
aaagccattctcagtatccgagatgataaaccacctgtggccgtgaagtatttctttgac
ttcctagaagagcaagcagagaaaagagggatcacagaccctgacactatacacatctgg
aagaccaacagtctacctctgaggttttgggtcaacatcctgaagaaccctcagttcgtc
ttcgacattgacaagacagatcacatcgatgcttgtctctctgtgatagcccaggccttc
attgatgcctgctccctatctgacctgcagctgggcaaggactccccaaccaataaacta
ctgtatgccaaggagatccctgagtataggaagatagtgcagcgatactacaagcaaatc
catgacatgcccccgctcagcgagcaagaaatgaatgcccacctcgcagaggagtcacgg
aaatatcggaatgaatttaacaccaacgtcgccatggctgagatatacaaatatgccaag
agatatcgctctcagatcgtggctgccctggatgccaaccccacgacgaagcgcacccag
ctccagcacaagtttgagcaagtgattgcactcatggaggataatatctacgagtgctgc
agtgaagcctag
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integrated database retrieval system
