Cuculus canorus (common cuckoo): 104064784
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Entry
104064784 CDS
T08597
Symbol
HLCS
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca00780
Biotin metabolism
cuca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
104064784 (HLCS)
Enzymes [BR:
cuca01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
104064784 (HLCS)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
104064784 (HLCS)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
104064784 (HLCS)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
104064784 (HLCS)
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Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
ABC_transp_aux
Motif
Other DBs
NCBI-GeneID:
104064784
NCBI-ProteinID:
XP_053907217
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Position
1:95085248..95208680
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AA seq
892 aa
AA seq
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MLITLCYLYLWARWGLRSAALIRRTVRRLHRSRCSFTFCCCRSAGPRARQPRRPAPPEER
VCLRIGNKVFFTDETQFFDDLNRWSLLLISPFIYPEKLLKAEHIAFVTESISAPTDNLQK
VPGSSKEIVKWSDYCSPLAYKPGEPYKLIAEASVDNFSNLGIAFMEDRLEMDNGMVPQKI
VSVHLQESTLKELAQVAPSVKEQSVSDKEMDEVTPAATSGTTVKSRLGVAESVGQGDEEK
SKLEKESEHEDESNSLSDKEAGSGEHHHLHLSSCHECLQLENSTIESVRFASAENIPELS
DDCDSKQEEKDDDCLTKKIKRVNLAGKPPNVLIYLGSETAKEEFQQVKSILQECIDADSY
TIYQLHEEQVLKAPWIDNSLLLIIATEEPISEENHKQFMKFLCKGGKILGFSSSFTFDGI
QIRRKSKLRNAVHELVVSKMDSTEIKLNLLVSGCIFEEVRKEDISKVKTLSRLNNADKDI
VIVHLTYGDNGGEAVLSQARLELDINSMDVQTEEDFNLLKISNAKRYEVLKEILISLGLN
CELSGTPMLTPIYLLSSDEEIHLSFLKWLEGNVDAEGLRASSKVSLKFVSYCESKMEITP
SLMPVITEMGNFSSEHFKLKTYQQNLQTKKLGKILLFTEVTTTTMNLLDGLMFELPEEMG
LIAIAVRQTQGKGRGGNVWLSPIGCALSTLHITIPLHSNLGQRIPFIQHLVSLAVVESVR
SIPGYEDIDLRVKWPNDIYYSDLMKLGGVLVNSTLIETTFHILIGFGFNVSNSNPTICIN
DLITKFNKEEGTTLKPLTTDCLIARTVTVLEKLIDIFQEKGPNGVLPRYYKYWIHSGKQV
RLYNEEGPTAWIVGIDDYGFLQVHEEGKGVESVHPDGNSFDMLKNLIVPKHR
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcacgctgtgctatctctacctatgggcgcgctgggggctccgctccgccgcc
ctgatccgccgtaccgtgcgccgcctccaccgctcccgctgctccttcaccttctgctgc
tgccgttccgccgggccccgcgcccggcagccgcgcaggccggcgccacccgaggagcga
gtctgcctccgcatagggaacaaagtctttttcacggacgagacgcagttctttgatgac
ttaaacaggtggagcctgcttctcatttctccttttatttatcctgagaagttacttaaa
gcagaacatatagcttttgtgacagaaagcatttcggctccaactgataatttgcagaaa
gtacctggctcttcaaaagagattgtgaagtggtcagactattgttcaccattggcctat
aaacctggtgagccttataagttgattgctgaagcaagtgtagataatttcagtaacctt
ggaatagcattcatggaagacaggcttgaaatggataatggaatggtgccacagaagatt
gtttctgtccatttgcaggaatctactctgaaggagttggcgcaggtggcaccatctgta
aaagagcaaagtgtaagtgacaaagaaatggacgaagtaactcctgctgcaacttctggg
actactgttaaatcaagattaggagtagctgagtctgtaggacaaggtgatgaagaaaaa
tccaagctagagaaagaaagtgagcacgaagatgaatccaacagtttatctgacaaagag
gcaggttctggagaacatcatcacttgcatctttccagttgtcatgaatgcctgcaactt
gaaaacagtactattgaatctgtcagatttgcctctgcagaaaacattccagaactttct
gatgattgtgatagcaagcaggaagagaaggatgatgactgtctaaccaaaaaaataaag
agagtaaaccttgctggaaagccccctaatgtattgatttatcttggctctgaaactgca
aaagaggaatttcagcaggtaaaatccatccttcaggaatgcattgatgcagacagctac
accatctaccagctgcacgaggaacaagttctgaaagctccatggattgataattcactg
ctgttgatcattgccacagaggagcctatttctgaggagaaccacaagcaatttatgaag
tttttatgtaaaggtggaaagattctagggttttcttcctcttttacgtttgatggcata
caaataaggagaaaaagcaaactgaggaacgctgttcatgaattagtggtctctaaaatg
gacagcactgaaattaagttaaatcttttggtcagtggctgtatttttgaggaagtgagg
aaggaagatatcagcaaagtgaagacattgagtcgattaaataacgctgataaagatata
gttattgttcatctgacttatggagacaacggaggagaagctgttctttctcaggcacgc
ttggaattggatatcaattcaatggatgtccaaactgaagaggattttaatttgcttaag
ataagcaatgccaagagatacgaagttctcaaggagatcctgatatcacttggcctgaat
tgtgaattaagtggaactcctatgttaacacctatttaccttctctcctctgatgaggaa
atccatctttcttttctgaagtggcttgagggaaatgtagatgctgaaggattaagagcg
tccagcaaagtgtctcttaaatttgtttcatattgtgaatcaaaaatggaaataactcca
tctctcatgccagtcatcactgagatgggaaacttctcatcagaacatttcaagctgaag
acatatcaacagaatcttcaaacaaagaagcttggaaagattcttctttttactgaagtt
accacgacaacaatgaatcttctagatgggttaatgttcgagttgccagaggagatgggt
ttaatagcaattgctgttcgacaaacacaagggaaaggtcgtggtggaaatgtttggctc
agtcctataggctgtgcactgtccactttacatatcaccattcctctacattcaaatctc
ggccagagaattccttttattcaacacctggtgtccttggcagtggtagagtcagttaga
tcaataccaggatatgaggatattgatctgcgagtaaaatggccaaatgatatttactac
agcgatcttatgaaactcggtggagttctggtaaactctacacttattgaaacaacattt
catatccttattggctttggttttaatgtgagtaacagcaaccccaccatatgcatcaat
gatctcatcacaaaatttaataaggaagaggggacaacactgaagcctttaactacagac
tgtcttattgcaagaactgtaactgtgctagagaaactcatagatattttccaggagaaa
gggcccaatggagttcttccccgttactataagtactggatacacagtggtaagcaagtc
cgtctctacaatgaggagggcccgactgcctggatagttgggatagatgattacggattt
cttcaagttcatgaagaaggcaagggtgtagagtctgtgcacccagatggcaactctttt
gacatgctgaaaaacctcatagtcccaaagcaccgatag
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