Cuculus canorus (common cuckoo): 104064887
Help
Entry
104064887 CDS
T08597
Symbol
PLEKHM1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04140
Autophagy - animal
cuca05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104064887 (PLEKHM1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104064887 (PLEKHM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
104064887 (PLEKHM1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cuca04990
]
104064887 (PLEKHM1)
Membrane trafficking [BR:
cuca04131
]
SNARE
SNARE associated proteins
Others
104064887 (PLEKHM1)
Domain-containing proteins not elsewhere classified [BR:
cuca04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
104064887 (PLEKHM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
104064887
NCBI-ProteinID:
XP_053944404
LinkDB
All DBs
Position
25:complement(7095449..7122130)
Genome browser
AA seq
1051 aa
AA seq
DB search
MHSSHADDPKEAIQLIKKQLVNAIKALQKQYVTSDAVVTSDDGNANTLCSTLEAVFVHGL
KAKHIRTESGGKGKKAGGRGPLPQPVFWGLLKSITHRNIVSELEQLIFINTDVGRCRAWL
RLALNDGLVECYLKLLLRERSRLLEYYQASALLLDAEECEFLLSYLQGLSSLTFELSYKS
AVLNEWTITPLSLSGLCPVSELLEPLTSSTSESHRKASVGSISQSSGSDEIEIQPSVLPI
SKASSKIKLTSSSLSLNTTSSSQLSSSLGSDSILPAHCARSPERSEEPLSCDSDLGTATA
EDLDRSLQEVLSEFSKAKPSLDAPEGGLVPSVLCCSPWHPACPPSASPIPAAPSCRTCQE
APPDTNGPGSARTATTSDRDGHAAPQANGTAVISATRHGGPSRGETGRGSTGSSSKANLA
VRSPTAEYLLSPLLGCPKRKSWISEDDFYRPSPGESSEIMANTNGFGPEGAGEAPAPGLI
SALDLERLSVPSTESENPQMSPEREQKGFSVVHRRQMGLSNPFRGLLKLGTLERRGVMGI
WKEFSCELSPLELRLFLDHEDRICVESYSLLRCESLALTHSDGRFELVFLGKKLYLRAPS
RDEAEDWLDRIREALHKCRPQLEEEEEWETLEYPESGGEGQPIQSNSSALLQYNDVPGNS
FDWTLAHEPELDAIKEAVLYMDVDKTWVPFIFSLSLETLKCFKVRNSDKILSNSYGIETI
QDILPDTSLGGPAFFKVITSKAVLKLQAENTEEAASWRELVREVLMSYLESAEEALTLGG
SLDGHSQVVLKNIVKENGFLLQYLVAIPVEKGLDSQSYICAGCSRQIGFSFTKPKLCAFS
GLYYCDSCHQDEETVIPSRLIHNWDLTKRGVCRQALKFLTQIRNQPLINLKLVNESLYDH
VERMGRIRQSREQLKLLGDYLIMCRSGALKELSKRLDHRHYLLECPHKYSVTDLRQIADG
VFETFLQSLLQFASHHVYNCDLCTQRGFICQICNSSDIIFPFEFDTTTRCNECKTVFHRD
CQASAKSCPRCERRQRYQRKLEAEASVEPSL
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgcattcgagtcacgccgatgaccccaaggaagcaatacagctgatcaagaagcagctg
gtgaatgccatcaaggcgttgcagaagcagtacgtgacctcagatgccgttgtaaccagc
gacgatgggaatgccaacaccctctgcagcaccctggaagctgtcttcgtgcacgggctg
aaggcaaagcacataaggacagagagtggggggaaaggaaagaaagcagggggtcgggga
ccacttccccagcccgtcttctgggggctgctgaagagcatcacccatcgcaatattgtc
tcagagctggaacaactcatctttatcaacacagatgtcggccgctgccgagcctggctg
aggctggctttgaacgatggcctcgtggagtgttacttgaagctactgctgcgggagagg
tcccggctgctggaatactaccaggcatctgctctgctcttagatgccgaagagtgtgaa
tttctccttagctacttgcaaggtttatcatccttaacttttgagctctcctataaatca
gcagttctgaacgagtggactatcacccctctgtccctgtccgggctgtgtcctgtttcg
gagctgctggagcccctcacatcctcaacatccgaatcccaccgaaaagcatcagtgggt
tcgatctcccaatcctcagggtcggatgagattgagattcaaccctctgtcctacccatc
agcaaagccagcagcaaaatcaagctcacgtcgtcctcattgagccttaacaccaccagc
tcatcccagctctcctccagcctgggctccgacagcatcctccctgctcactgtgcccgc
agtcccgagcggagcgaggagccactctcctgcgactccgacttgggaacagccactgcc
gaggacctggacaggtcgctgcaagaggtgttgtccgagtttagcaaagccaagccgagc
ctggatgccccggagggagggctggtccccagcgtgctgtgctgctccccatggcatccc
gcctgccccccatccgcatcgcccatccctgcagcaccatcctgtagaacttgccaggag
gcacctcctgacaccaacggtccaggttctgctcgaacagcaaccaccagcgatagggat
ggacatgcagcaccacaagccaatggcacggccgttatttcagccacgcggcatggtggt
cccagcagaggagagacaggcagaggcagcacaggcagcagcagcaaagcaaacctggct
gtccgcagcccgacagctgagtacctcctttctccactgcttggatgtccgaaaagaaag
agctggatctcagaagatgatttctacagaccttcaccaggagagagcagcgaaatcatg
gccaacaccaatggctttgggccagaaggggctggtgaggctccagccccagggctcatt
agtgctctggacttggaacggttgtcggtgccatccacagagagtgaaaatccccaaatg
tcacctgaacgtgagcaaaagggcttcagcgttgtgcatcgcagacagatgggtctttcc
aaccctttccgagggctcctgaagctgggcaccctggagcggagaggagtcatgggaata
tggaaggagttttcctgcgaactgtctccactggagctccgactcttcctagaccatgag
gaccgcatttgtgttgagagttattccctgctgcgctgcgagtcactggcattgacgcac
tcggatggccgtttcgagctggttttcctggggaaaaagctttacctacgagctccttct
cgagatgaggctgaggactggttggacaggatccgcgaggcgctgcacaagtgccggcct
cagctggaggaggaggaggagtgggagacgctggagtatccagaaagtggtggtgaaggc
cagcccatccagagcaactcctctgctcttctccagtacaatgacgtgcctgggaacagc
tttgactggactctagctcatgaaccagagctggatgccatcaaagaggctgttttgtac
atggatgtggacaaaacctgggtcccttttattttttccttgtctctagaaactttaaag
tgctttaaagtccggaacagtgacaaaattttaagcaacagttatggtatcgagaccatc
caggacattcttccagacacaagccttgggggacccgcgttctttaaagtgatcacctcc
aaagctgtcctgaagctgcaggctgagaacacagaagaagcagcctcgtggagagagctg
gtccgagaggtgctcatgtcctacctggagagcgctgaggaggcgctgacgctgggtggc
agcttggatgggcactcccaggttgtcctgaagaacattgtgaaggagaatggcttcttg
ttgcagtatctcgtggccatccccgtggagaagggcctggactcacagagctacatctgt
gcaggctgctccaggcagatcggtttctccttcacaaagccaaagctctgtgccttctct
ggtctctattactgtgacagctgccaccaggacgaggagacagtgattccctcgcgcctc
atccacaactgggatctcacaaaacgaggggtttgccggcaggctttgaagttcctcacg
cagatccgtaaccagccgctgatcaacctgaagctggtcaacgagagcctctatgaccat
gtggagaggatgggacggattcggcagagcagggaacagctgaagctgctgggagattat
ctcatcatgtgccgcagtggggccctgaaggagctgagcaagcggcttgaccacaggcac
tacctcttggagtgtccacataaatacagcgtcactgatctgaggcagatagcagatggt
gtctttgagaccttcctgcagtctctgctccagtttgcttcccatcatgtctacaactgc
gacctgtgcacccagcgtggcttcatctgccagatctgcaacagcagcgacatcattttt
cccttcgagtttgacactaccaccaggtgcaatgaatgcaaaaccgtcttccaccgggac
tgccaagccagtgccaagtcgtgtccccgctgcgagcgccggcagaggtaccagcggaag
cttgaggcagaggccagcgtggagccaagtctgtag
DBGET
integrated database retrieval system
