Cuculus canorus (common cuckoo): 104064891
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Entry
104064891 CDS
T08597
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cuca04040
]
104064891 (SCN4A)
Ion channels [BR:
cuca04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104064891 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ
GPHH
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
104064891
NCBI-ProteinID:
XP_009565587
LinkDB
All DBs
Position
Unknown
AA seq
1840 aa
AA seq
DB search
MAGLPYIPGPENLRPFTPASLAAIEKCIAEAEALKIKRQHVELPEEEELKPSSDLEAGKN
LPLIYGDPPLELIGTPLEDLDPFYRDKKTFIVLNKGKSIFRFSATPALYMLGPFHPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTLSNPPAWSKNVEYTFTGIYTFESLIKILSRGFCI
DDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPLNDTLLEDLGLDNDTFVN
ATLYSNFTDGFIGNFTSNFTSNDTFDFEDYINNEVNHYFLEGALDALLCGNSSDAGKCPE
GYQCMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVVI
FLGSFYLINLILAVVAMAYAEQNDATMLEEQQKEEEFQQLMEQLKKHQEEQEKMLQERQS
SGSSMPSSLAETEQNSDLNSDQDKAKDCNGQVVPKVVLQRSATVIDFDPANKPEKSDHNH
LTVGNQDGPGLEKRTGSAISVLSNAVEELEEAHQKCPPWWYKCTHTFLVWNCCPLWVKLK
EFVKVVVMDPFVDLGITICIVLNTVFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEMVLK
LIALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNM
LIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISIDCTLPRWHMNDFF
HSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFSAD
SLAASDDDGEMNNLQIAISRITRGLDFIKTSVLMLLRSLWKGKKVAPEEEQEPSKRENSV
LNHVDTSQESKSEYLDGVTGKEHFLMDELDHMNFINNPHLMVQVPIASEESDLYEETSTQ
SDTEDAKNLLTSDNTSSLCSTVDYKPPPPVEEEVAEEAEESQEPEECFTESCVKRFPCLY
VDITSDRGKVWWNIRKTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIRTILE
YADKVFSYIFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIVSLTANWLGYSELGAIK
SLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF
YRCVNTTTGDLFDISDVNNKSDCMALLHTNEVRWVNVKVNFDNVGLGYLSLLQVATFKGW
MDIMYAAVDSREIEEQPMYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFG
GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKFQGMVFDFVTKQVFDITIMILICLN
MVTMMVETDDQSELKTSILYKINLVFIVIFTGECVLKMFALRYYYFTIGWNIFDFVVVIL
SILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIG
LLLFLVMFIYSIFGMSNFAYVKKEAGIDDIFNFETFGNSIICLFQITTSAGWDGLLSPIL
NSGPPDCDPDLENPGSSVKGNCGNPSIGIFFFCSYIIISFLIVVNMYIAIILENFNVATE
ESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLKIPKPNKIKLITMDL
PMVAGDKIHCLDILFALTKEVLGDSGEMDGLKATMEEKFMAANPSKVSYEPITTTLKRKH
EEVCATKIQRAFRRYLLRRSMKQASYMYRHSKDEDDLREDAPEKEGLIATKMREMYGNSG
TDVETAPAFDLAPVPSSETRDPPGKAKAWDKERVVKESLV
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgccgtacatcccgggccctgagaacctccgccccttcacacctgcctca
ctcgctgccatcgagaagtgcatcgccgaggcagaggcactcaagataaagcggcagcat
gtagagctgcctgaggaagaggagctcaagcccagcagtgacctggaagctgggaagaac
ctgcccctcatctatggagacccaccgttggagctcatcggaacacctctggaggacctg
gaccctttctacagagataagaagacgtttatagtcctcaacaaagggaagtccatcttc
cgcttttcagcaacccctgccctctacatgctggggcccttccatcctatccgcagagga
gccatcaaagtgcttatccattcattattcagtatgttcatcatgatcaccattttaacc
aactgtgtgtttatgacgctaagcaatcccccagcatggtccaagaacgtggaatacacc
ttcactgggatatacaccttcgaatccctcatcaagatactgtcgagaggcttctgcatc
gatgacttcacattcctgcgtgacccgtggaattggctggacttcatggtcatctccatg
gcctatatcactgagttcgtggacctgggcaacatttcagctctcaggaccttccgtgtc
ctccgtgccttgaaaaccatcactgtgataccagggctgaagactattgttggggctctg
atccagtccgtgaagaaactctcagacgtcatgatcctcaccgtcttctgcctgagcgtg
tttgcccttgttggcctccagctcttcatggggaacctccggcagaagtgtgtgcggtgg
cctccccttaatgacaccctgctggaagacttggggctggacaatgacacgtttgtcaat
gcaacactctacagcaacttcaccgacggcttcattggcaacttcaccagcaacttcacc
agcaacgacacctttgattttgaggactacatcaacaatgaagtcaatcactactttctg
gagggagcgcttgacgccctgctctgtgggaacagcagtgatgctgggaagtgccctgaa
ggataccaatgcatgaaggcagggaggaacccgaactatggctacaccagctatgatacc
ttcagctgggctttcctggccctcttccgtctcatgacgcaggactattgggagaacctc
ttccagctgacactccgtgcagcagggaaaacgtacatgatcttcttcgtggtggttata
tttcttggttccttctacctcatcaacctcatccttgcggtggtcgccatggcttatgca
gaacaaaatgatgccaccatgctggaggagcagcagaaggaggaggaattccagcagctc
atggagcagctgaagaagcatcaagaggagcaagagaagatgttgcaggagcggcaatcc
agcggcagttccatgcccagcagcctggccgagacggagcaaaactcagacctgaacagt
gaccaggacaaagcaaaggactgcaatgggcaagtggtccccaaggttgtgctgcagaga
tctgcaacggtgattgatttcgacccagccaacaagccagagaaatcggaccataaccac
ctcacagtaggcaaccaagatgggccaggccttgagaagaggacggggagtgccatcagt
gtcctctccaatgctgtggaagagctggaggaagctcaccagaagtgcccaccttggtgg
tacaaatgtacccacacattcctggtctggaactgctgtccactgtgggtgaagctgaag
gaatttgtcaaggtggtggtgatggaccccttcgtggacctgggcatcaccatctgcatc
gtgctcaacacagtcttcatggccatggagcattaccccatgacagaggagttcgagaat
gtgctgaccgtggggaacctggtcttcacggggatcttcacggcagagatggtcctgaag
ctcattgctctggacccctacgagtatttccagcagggctggaacatctttgacagcatc
atcgtcaccttgagcctggtggagctgggcctggccaacgttcaagggctctccgtgctc
cgttctttccgcttgctgagggttttcaaactcgccaagtcctggcccacccttaacatg
ctcatcaagatcatcggcaactcagtgggtgccctggggaacctcacactggtactggcc
atcatcgtcttcatcttcgccgtggtggggatgcagctcttcgggaagagctacatagag
tgtgtgtgcaagatctccattgactgcacgctgccccgctggcacatgaacgatttcttt
cactccttcctcattgtcttccgcatcctctgtggggagtggattgagaccatgtgggac
tgcatggaggtggccggccagaccatgtgcctcatcgtcttcatgatggttatggtcatt
gggaaccttgtggtgctgaacctgtttttagctttgctgctgagctccttcagtgccgat
agcctggcagcatcggatgacgatggagagatgaacaatttgcagatcgctatcagcagg
atcaccaggggactcgacttcataaagacatctgtcctcatgctgctccgcagtctgtgg
aaagggaagaaggtggccccagaggaagagcaagagcccagtaagagggaaaactctgtg
ctaaaccatgtggacactagccaggagtccaagtcagagtacctggatggagtcacaggc
aaagagcactttttaatggatgaactggaccacatgaatttcattaacaacccccatttg
atggtgcaagtccccatcgcctcagaggagtccgacctctatgaggagacgagcacccaa
tccgacactgaagatgccaagaatctcctcaccagtgacaacacatcatctctgtgcagc
acggtggattacaagcccccgccaccggtggaggaggaggtggcagaagaagctgaggag
agccaagagccagaggaatgcttcactgaaagctgtgtgaagaggtttccctgcctctat
gtggacatcaccagtgacagagggaaggtctggtggaacatccggaaaacctgcttccgt
attgtggagcatgactggttcgagaccttcatcgtcttcatgatcctcctcagcagcgga
gcactggcttttgaagacatctacatcgaacaacgaaaagtgatacgcaccatcctggag
tatgctgacaaggtcttctcctacatctttgtcattgagatgttgctcaagtgggtggcc
tatggcttcaaggtgtatttcaccaatgcatggtgctggctggatttcctcatcgtcgat
gtttccattgtcagcctgacggcaaactggctgggatactccgagctgggagccatcaaa
tccctgcggacactgagagctctgagaccactgcgtgccctgtccagatttgagggcatg
agggtggttgtgaatgccttgctgggtgctatcccctccatcatgaatgtcctgctggtg
tgcctcatcttctggctaatattcagcattatgggggtgaacctctttgccggcaagttc
taccgatgcgtcaacaccaccacaggggacctcttcgacatcagcgatgtgaacaacaag
agtgactgcatggccctccttcacaccaatgaagtcagatgggtcaacgtcaaagttaat
ttcgacaacgtaggcttgggatacctctccttgctgcaggtggcgaccttcaaaggctgg
atggacatcatgtacgctgctgtggactcacgcgagattgaagagcaaccaatgtatgag
atcaacctctacatgtacatctactttgttatcttcatcatcttcggtgccttcttcacc
ctgaacctcttcattggcgtcatcattgacaacttcaatcagcagaagaaaaagtttgga
ggcaaagacatcttcatgacagaagagcagaagaaatactataatgccatgaaaaagcta
ggctccaagaaaccccagaagcccatccccaggccttcgaacaagtttcaagggatggtg
tttgactttgttaccaagcaagtgtttgacataaccatcatgatcctgatttgtcttaac
atggtgaccatgatggtcgaaacagatgatcaaagcgaactcaaaacatctatcctctac
aagatcaacctggtctttattgtcatcttcactggagagtgtgttctcaaaatgtttgcc
ttgcgctactactacttcactattggctggaacatctttgactttgtggtggtcatactc
tccatcttaggtattgtcctctcagacatcatagaaaagtacttcgtatcacctaccctc
ttcagggtcatcaggctggcaaggattggtcgtgtcctccggctgattcgaggggcaaaa
ggcatccggactctcctctttgctctgatgatgtccctgcctgccctcttcaacatcggt
ctcctgcttttccttgtcatgttcatctactccatcttcgggatgtccaactttgcctat
gtaaagaaggaggcaggaattgacgacatcttcaactttgaaacttttgggaacagcatc
atctgcctcttccagatcaccacatcagctggatgggatggtctcctcagcccgatcctg
aacagtggtccccctgactgtgaccctgacctggaaaaccctggcagttcagtaaaaggg
aactgtggcaatccgtccattggcatcttcttcttctgcagctacatcatcatttccttt
ctcattgtggtgaatatgtacattgccatcatcctggagaacttcaacgtggccacggag
gagagcagcgaacccctctgtgaagatgattttgaaatgttttatgaaacctgggagaag
tttgacccagacgccacccagttcattgcatacagcaccttgtctgattttgtagacacc
ttacaggagccactcaaaattcccaagccgaacaagatcaagctaatcaccatggatcta
ccaatggttgctggggacaaaatccactgtctggatatcctctttgccctgactaaagaa
gtgctaggagactcgggagagatggatggcttgaaggccaccatggaggagaagttcatg
gctgcaaacccctcaaaggtttcctatgagcccatcaccaccactctgaaaaggaaacat
gaggaagtctgtgctacaaaaatccagagggctttccggaggtacctcttgaggcgctcg
atgaagcaggcatcctacatgtacagacacagtaaggatgaggatgacctgagagaggat
gcacctgagaaggaaggtctaatcgccaccaaaatgagggagatgtatgggaacagtggg
acagatgtggagacagcccctgcctttgatcttgcacccgttcccagctcagagactcga
gatcctcctggcaaagcaaaggcatgggataaggaacgtgttgtgaaagagtcgctggta
taa
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